| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is divA [H]
Identifier: 197105791
GI number: 197105791
Start: 2642519
End: 2644264
Strand: Reverse
Name: divA [H]
Synonym: PHZ_c2329
Alternate gene names: 197105791
Gene position: 2644264-2642519 (Counterclockwise)
Preceding gene: 197105792
Following gene: 197105790
Centisome position: 66.17
GC content: 73.08
Gene sequence:
>1746_bases ATGAGCCTGGGCCAGCAGGCCTTCGGCGGCTCGGCCGTCTCGCGCTGGTTCAAGGAGCGCATCTGGGGTCTCGAGCACGC CTTCGAGCGGGCTCGCGCCTCGGGCCGCGCCGAGGACGACACGCGCCTGCGCATCTTCTTCGTGCTGGTGCTGTTCGTGC TGGGCTTCGTCTGGCTGTCGGTGGGCGCTACGCGCGCGGCGCTCTTCTCGGACGCCCGGGGCGGCGGCCGCATCGCGCCG GCCGGAGTCTCCCGCGCCGATCTCGTCGACCGCAACGGCATGCTGCTGGCGGCCGACCTGCTGCACTACGGCCTCTACAT CGATCCGCGCGAGATCTGGGAGACCGAGGAGACCCGCCGCCAGCTCCTGGCCGCCCTGCCGGGCCTCGACAGGGCGCGCC TCGAACGCGCCCTGCGCGGCCAGCGCCGCCTGTTCGTGATGGGCGCCCTGACGCCCGCCGAACGCAATCGCGTCCACGCC CTGGGCCTGCCCGGCGTCAGCTTCGAGCCCGAGCAGCGCCGCGTCTATCCGCTGGGCGCGAGCGCCGCCCACGTCATCGG CTTCTCAGACACCGGGGGCGAGGGCCTGTCGGGCGCCGAGGCCGCGCTGAACGAGGAGATCCGCGCCGCGGCCGGCGGCC AGGTCCCCCTGTCCATCGACCTGCGCGTCCAGGGCGCGCTGGAGGACGAGCTGTGGAAGGCCGTCCACGAGTTCACCCCG AAGGGCGCGGTGGGCCTCGTCACCGACGTGCACACCGGCGAGATCCTGGGGATGGCCAGCTGGCCGACCTTCGACCCGAA CAAGCCCGGCCAGGCCACCGACTACGTGCGCACCAACCGCGCGGCCGCCTCGGTCTTCGAGATGGGCTCGACGTTCAAGG CGTTCACCGTCGCCATCGGCCTCGACGCCGGCGTCGCCACTCCGAACACGACCTTCGACGCGCGCGAGCCCTTCAAGCTG GGCTACCGGACGATCCACGACTACCACGCCGCCCGGAAGGTCCTGACCCTGGTCGAGGTGTTCCAGCACTCGTCCAACAT CGGCACCGCCAAGCTGGCCGTGGGCATCGGCCCCGAGCGCATGGGCCGTTACTTCGACGGCCTGGGGCTGACCAAGCCCG CGCCGGTGGAGCTGATCGAGTCCGCGCGGCCCCTGACCCCGCGCAAGTGGGACGAGGACGCGGTGGCCTCCACCTCCTTC GGCCACGGCATCAACGTCAGCCCGCTGGCGCTCGCCCGGGCCATGGGCGCGATCCTGAACGGCGGGCGCCTCGTGCCGCT GACCATCCGCAAGCTGGAACCCGGTGCGGCAGTCGACGGTCCCCGGGTGATGTCCGAGCGCACGTCCCTGCAGATGCTGT CGATCATGCGCGCCAACGTGGCGGGCGAGGCGGGCAGCGGCCGGTCGGCCAACATCCCGGGCCTGTCGGTGGGCGGCAAG ACCGGCACCGGCGAGAAGTACGATCCTGCGATCCGCGCCTACAACCACGAGCGTCAGGTCTCCTCGTTCGCCGCCGTGTT CCCCACCAGCGGCCCGGCCGAGGCCAAGCGCTACTTCGTGCTGATCCTGCTGGACGAGCCGCACGGCACCGCCCGCAGCG CCGGCTACGCCACCGGCGGCTGGGTGGCCGCGCCGGCCGCCGGCCGGGTCATCGAGCGCATCGCCCCGTTCCTGGGCGTC GAGCGCCAGCCCGAGCTCGCCGAGATCGCGCCCGCGGGCGCCGCGCCGATGGGGGAGGGCCAGTGA
Upstream 100 bases:
>100_bases CCGCCGTGGCCGCCATGGTGAACGAGAGCGACGCCACCCCCGGCGTGCCGCCGCCCCCGCCGCCGGAAGGCCGCAGCCTC CGGATCGCCGAGGCCGGGCG
Downstream 100 bases:
>100_bases AGCGCCTCTCGGCCATCGTGAAGCGCGGCCTGCCGGCGGATCCCGAGATCACCGGCGTCACCGCCGACAGCCGCAAGGTG CGGGCCGGCACGCTGTTCGC
Product: penicillin-binding protein B
Products: NA
Alternate protein names: PBP-2 [H]
Number of amino acids: Translated: 581; Mature: 580
Protein sequence:
>581_residues MSLGQQAFGGSAVSRWFKERIWGLEHAFERARASGRAEDDTRLRIFFVLVLFVLGFVWLSVGATRAALFSDARGGGRIAP AGVSRADLVDRNGMLLAADLLHYGLYIDPREIWETEETRRQLLAALPGLDRARLERALRGQRRLFVMGALTPAERNRVHA LGLPGVSFEPEQRRVYPLGASAAHVIGFSDTGGEGLSGAEAALNEEIRAAAGGQVPLSIDLRVQGALEDELWKAVHEFTP KGAVGLVTDVHTGEILGMASWPTFDPNKPGQATDYVRTNRAAASVFEMGSTFKAFTVAIGLDAGVATPNTTFDAREPFKL GYRTIHDYHAARKVLTLVEVFQHSSNIGTAKLAVGIGPERMGRYFDGLGLTKPAPVELIESARPLTPRKWDEDAVASTSF GHGINVSPLALARAMGAILNGGRLVPLTIRKLEPGAAVDGPRVMSERTSLQMLSIMRANVAGEAGSGRSANIPGLSVGGK TGTGEKYDPAIRAYNHERQVSSFAAVFPTSGPAEAKRYFVLILLDEPHGTARSAGYATGGWVAAPAAGRVIERIAPFLGV ERQPELAEIAPAGAAPMGEGQ
Sequences:
>Translated_581_residues MSLGQQAFGGSAVSRWFKERIWGLEHAFERARASGRAEDDTRLRIFFVLVLFVLGFVWLSVGATRAALFSDARGGGRIAP AGVSRADLVDRNGMLLAADLLHYGLYIDPREIWETEETRRQLLAALPGLDRARLERALRGQRRLFVMGALTPAERNRVHA LGLPGVSFEPEQRRVYPLGASAAHVIGFSDTGGEGLSGAEAALNEEIRAAAGGQVPLSIDLRVQGALEDELWKAVHEFTP KGAVGLVTDVHTGEILGMASWPTFDPNKPGQATDYVRTNRAAASVFEMGSTFKAFTVAIGLDAGVATPNTTFDAREPFKL GYRTIHDYHAARKVLTLVEVFQHSSNIGTAKLAVGIGPERMGRYFDGLGLTKPAPVELIESARPLTPRKWDEDAVASTSF GHGINVSPLALARAMGAILNGGRLVPLTIRKLEPGAAVDGPRVMSERTSLQMLSIMRANVAGEAGSGRSANIPGLSVGGK TGTGEKYDPAIRAYNHERQVSSFAAVFPTSGPAEAKRYFVLILLDEPHGTARSAGYATGGWVAAPAAGRVIERIAPFLGV ERQPELAEIAPAGAAPMGEGQ >Mature_580_residues SLGQQAFGGSAVSRWFKERIWGLEHAFERARASGRAEDDTRLRIFFVLVLFVLGFVWLSVGATRAALFSDARGGGRIAPA GVSRADLVDRNGMLLAADLLHYGLYIDPREIWETEETRRQLLAALPGLDRARLERALRGQRRLFVMGALTPAERNRVHAL GLPGVSFEPEQRRVYPLGASAAHVIGFSDTGGEGLSGAEAALNEEIRAAAGGQVPLSIDLRVQGALEDELWKAVHEFTPK GAVGLVTDVHTGEILGMASWPTFDPNKPGQATDYVRTNRAAASVFEMGSTFKAFTVAIGLDAGVATPNTTFDAREPFKLG YRTIHDYHAARKVLTLVEVFQHSSNIGTAKLAVGIGPERMGRYFDGLGLTKPAPVELIESARPLTPRKWDEDAVASTSFG HGINVSPLALARAMGAILNGGRLVPLTIRKLEPGAAVDGPRVMSERTSLQMLSIMRANVAGEAGSGRSANIPGLSVGGKT GTGEKYDPAIRAYNHERQVSSFAAVFPTSGPAEAKRYFVLILLDEPHGTARSAGYATGGWVAAPAAGRVIERIAPFLGVE RQPELAEIAPAGAAPMGEGQ
Specific function: Synthesis of cross-linked peptidoglycan from the lipid intermediates [H]
COG id: COG0768
COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI1786272, Length=546, Percent_Identity=30.03663003663, Blast_Score=190, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR005311 - InterPro: IPR001460 [H]
Pfam domain/function: PF03717 PBP_dimer; PF00905 Transpeptidase [H]
EC number: NA
Molecular weight: Translated: 62027; Mature: 61896
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS00146 BETA_LACTAMASE_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLGQQAFGGSAVSRWFKERIWGLEHAFERARASGRAEDDTRLRIFFVLVLFVLGFVWLS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH VGATRAALFSDARGGGRIAPAGVSRADLVDRNGMLLAADLLHYGLYIDPREIWETEETRR HCHHHHHHHHCCCCCCEECCCCCCHHHHHCCCCCEEEEHHHHHCCEECHHHHHCCHHHHH QLLAALPGLDRARLERALRGQRRLFVMGALTPAERNRVHALGLPGVSFEPEQRRVYPLGA HHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCEEEECCC SAAHVIGFSDTGGEGLSGAEAALNEEIRAAAGGQVPLSIDLRVQGALEDELWKAVHEFTP CCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHCCC KGAVGLVTDVHTGEILGMASWPTFDPNKPGQATDYVRTNRAAASVFEMGSTFKAFTVAIG CCCEEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEE LDAGVATPNTTFDAREPFKLGYRTIHDYHAARKVLTLVEVFQHSSNIGTAKLAVGIGPER CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHH MGRYFDGLGLTKPAPVELIESARPLTPRKWDEDAVASTSFGHGINVSPLALARAMGAILN HHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHC GGRLVPLTIRKLEPGAAVDGPRVMSERTSLQMLSIMRANVAGEAGSGRSANIPGLSVGGK CCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCC TGTGEKYDPAIRAYNHERQVSSFAAVFPTSGPAEAKRYFVLILLDEPHGTARSAGYATGG CCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCC WVAAPAAGRVIERIAPFLGVERQPELAEIAPAGAAPMGEGQ EEECCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCC >Mature Secondary Structure SLGQQAFGGSAVSRWFKERIWGLEHAFERARASGRAEDDTRLRIFFVLVLFVLGFVWLS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH VGATRAALFSDARGGGRIAPAGVSRADLVDRNGMLLAADLLHYGLYIDPREIWETEETRR HCHHHHHHHHCCCCCCEECCCCCCHHHHHCCCCCEEEEHHHHHCCEECHHHHHCCHHHHH QLLAALPGLDRARLERALRGQRRLFVMGALTPAERNRVHALGLPGVSFEPEQRRVYPLGA HHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCEEEECCC SAAHVIGFSDTGGEGLSGAEAALNEEIRAAAGGQVPLSIDLRVQGALEDELWKAVHEFTP CCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHCCC KGAVGLVTDVHTGEILGMASWPTFDPNKPGQATDYVRTNRAAASVFEMGSTFKAFTVAIG CCCEEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEE LDAGVATPNTTFDAREPFKLGYRTIHDYHAARKVLTLVEVFQHSSNIGTAKLAVGIGPER CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHH MGRYFDGLGLTKPAPVELIESARPLTPRKWDEDAVASTSFGHGINVSPLALARAMGAILN HHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHC GGRLVPLTIRKLEPGAAVDGPRVMSERTSLQMLSIMRANVAGEAGSGRSANIPGLSVGGK CCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCC TGTGEKYDPAIRAYNHERQVSSFAAVFPTSGPAEAKRYFVLILLDEPHGTARSAGYATGG CCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCC WVAAPAAGRVIERIAPFLGVERQPELAEIAPAGAAPMGEGQ EEECCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3126399 [H]