Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is prmA [H]

Identifier: 197105766

GI number: 197105766

Start: 2611269

End: 2612135

Strand: Direct

Name: prmA [H]

Synonym: PHZ_c2304

Alternate gene names: 197105766

Gene position: 2611269-2612135 (Clockwise)

Preceding gene: 197105764

Following gene: 197105767

Centisome position: 65.34

GC content: 73.59

Gene sequence:

>867_bases
ATGAGCGACGAGGCCGTCCAGATCATCGCCCGCGGCCCGCGCCGCATTGCCGAAGCCGCAGCCGCCGCGCTGGAGGCCGA
GCCCGCCACCGAGGCGCTGACCTACTCGATCCTCGAAGAGGACGAGGACCACGACGTCTGGCGCATCGACGCCTTCCCGA
CCACCGACCAGGAGCGCGAGGCCATCGCGGCCGTGCTGGTGCGCTTCGGCGACCTGCGGGTGAGCACCGAGGTGCTGGCC
GACGCCGACTGGCTGGCCATGGCGCTGTCGGGCCTGCCGCCCGTGCGAGCGGGCCGGTTCTTCGTCTACGGCGCCCACGA
CCGGGGCCTGGCCCCCGCCAGCACCGTGAACCTGCGCATCGAGGCGGGCGCGGCCTTCGGCACCGGCCACCACGGGACCA
CCGTGGGCTGCCTGCTGGCCTTCGACGAGCTGCTCAAGGCGCGCCGTTTCCCGAAGGTGCTGGACGTGGGCTGCGGCACC
GGGGTGCTGGCCATCGCCGCCGCGCGCACAGGCTCGGAGCTCGCCGTCGGCACCGACATCGACCGCGTCTCGGTCCGCAT
CGCCAACGAGAACGCCACGCTGAACCGGGCGGGCGCCGAGTTCGTCCACGCCTCGGGCCTCGGCCATCCCGCGGTCCGCA
CCCGCGGCCCGTACGACCTGGTGTTCGCCAACATCCTGGCGCCGCCGCTGGTGGCGCTGTCGCAGGACATCCGCAATGCG
CTGAAGCCCGGCGGGCTGGCGATCCTCTCGGGCCTACTGCGGACCCAGGAGCGGCGCGTGCTGGCGGCCTACCTCTCCAA
GGGGTTCAAGCTCCAGCGGCGGCTGCACCGGGACGCCTGGGCCACGCTGGTCGTTCGCAGGCCCTGA

Upstream 100 bases:

>100_bases
CGCCGCCGCCCGAAGACTCCGAGCTCGCCGAGATGGCGGCGGCGACGCCGGGCTGATCCCCCTCGCCTTTCGCGCGCCGG
GCCGCTAGAGGCTCACGCCC

Downstream 100 bases:

>100_bases
CGGAACCGCCCAAGGAACCCGCGCCCGAGGAACCCCACAGGGCGAGCGCCGTTCTCAGCCGGAAGGCCAAGCTTGGCCGA
GGAGGAGGCTGAGATGACCG

Product: ribosomal protein L11 methyltransferase

Products: NA

Alternate protein names: L11 Mtase [H]

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MSDEAVQIIARGPRRIAEAAAAALEAEPATEALTYSILEEDEDHDVWRIDAFPTTDQEREAIAAVLVRFGDLRVSTEVLA
DADWLAMALSGLPPVRAGRFFVYGAHDRGLAPASTVNLRIEAGAAFGTGHHGTTVGCLLAFDELLKARRFPKVLDVGCGT
GVLAIAAARTGSELAVGTDIDRVSVRIANENATLNRAGAEFVHASGLGHPAVRTRGPYDLVFANILAPPLVALSQDIRNA
LKPGGLAILSGLLRTQERRVLAAYLSKGFKLQRRLHRDAWATLVVRRP

Sequences:

>Translated_288_residues
MSDEAVQIIARGPRRIAEAAAAALEAEPATEALTYSILEEDEDHDVWRIDAFPTTDQEREAIAAVLVRFGDLRVSTEVLA
DADWLAMALSGLPPVRAGRFFVYGAHDRGLAPASTVNLRIEAGAAFGTGHHGTTVGCLLAFDELLKARRFPKVLDVGCGT
GVLAIAAARTGSELAVGTDIDRVSVRIANENATLNRAGAEFVHASGLGHPAVRTRGPYDLVFANILAPPLVALSQDIRNA
LKPGGLAILSGLLRTQERRVLAAYLSKGFKLQRRLHRDAWATLVVRRP
>Mature_287_residues
SDEAVQIIARGPRRIAEAAAAALEAEPATEALTYSILEEDEDHDVWRIDAFPTTDQEREAIAAVLVRFGDLRVSTEVLAD
ADWLAMALSGLPPVRAGRFFVYGAHDRGLAPASTVNLRIEAGAAFGTGHHGTTVGCLLAFDELLKARRFPKVLDVGCGTG
VLAIAAARTGSELAVGTDIDRVSVRIANENATLNRAGAEFVHASGLGHPAVRTRGPYDLVFANILAPPLVALSQDIRNAL
KPGGLAILSGLLRTQERRVLAAYLSKGFKLQRRLHRDAWATLVVRRP

Specific function: Methylates ribosomal protein L11 [H]

COG id: COG2264

COG function: function code J; Ribosomal protein L11 methylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. PrmA family [H]

Homologues:

Organism=Escherichia coli, GI2367208, Length=211, Percent_Identity=33.6492890995261, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010456
- InterPro:   IPR004498 [H]

Pfam domain/function: PF06325 PrmA [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 30839; Mature: 30707

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEAVQIIARGPRRIAEAAAAALEAEPATEALTYSILEEDEDHDVWRIDAFPTTDQERE
CCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHH
AIAAVLVRFGDLRVSTEVLADADWLAMALSGLPPVRAGRFFVYGAHDRGLAPASTVNLRI
HHHHHHHHHCCCEEHHHHHHCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEE
EAGAAFGTGHHGTTVGCLLAFDELLKARRFPKVLDVGCGTGVLAIAAARTGSELAVGTDI
EECCEECCCCCCCHHHHHHHHHHHHHHHCCCHHEECCCCCCHHHEEECCCCCCEEECCCC
DRVSVRIANENATLNRAGAEFVHASGLGHPAVRTRGPYDLVFANILAPPLVALSQDIRNA
CEEEEEEECCCCEEECCCHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LKPGGLAILSGLLRTQERRVLAAYLSKGFKLQRRLHRDAWATLVVRRP
CCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEEEEEECC
>Mature Secondary Structure 
SDEAVQIIARGPRRIAEAAAAALEAEPATEALTYSILEEDEDHDVWRIDAFPTTDQERE
CCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHH
AIAAVLVRFGDLRVSTEVLADADWLAMALSGLPPVRAGRFFVYGAHDRGLAPASTVNLRI
HHHHHHHHHCCCEEHHHHHHCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEE
EAGAAFGTGHHGTTVGCLLAFDELLKARRFPKVLDVGCGTGVLAIAAARTGSELAVGTDI
EECCEECCCCCCCHHHHHHHHHHHHHHHCCCHHEECCCCCCHHHEEECCCCCCEEECCCC
DRVSVRIANENATLNRAGAEFVHASGLGHPAVRTRGPYDLVFANILAPPLVALSQDIRNA
CEEEEEEECCCCEEECCCHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LKPGGLAILSGLLRTQERRVLAAYLSKGFKLQRRLHRDAWATLVVRRP
CCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: Catalyzes the methylation of ribosomal protein L11 by S-adenosyl methionine [C]

General reaction: Transferases; Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]