| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is prmA [H]
Identifier: 197105766
GI number: 197105766
Start: 2611269
End: 2612135
Strand: Direct
Name: prmA [H]
Synonym: PHZ_c2304
Alternate gene names: 197105766
Gene position: 2611269-2612135 (Clockwise)
Preceding gene: 197105764
Following gene: 197105767
Centisome position: 65.34
GC content: 73.59
Gene sequence:
>867_bases ATGAGCGACGAGGCCGTCCAGATCATCGCCCGCGGCCCGCGCCGCATTGCCGAAGCCGCAGCCGCCGCGCTGGAGGCCGA GCCCGCCACCGAGGCGCTGACCTACTCGATCCTCGAAGAGGACGAGGACCACGACGTCTGGCGCATCGACGCCTTCCCGA CCACCGACCAGGAGCGCGAGGCCATCGCGGCCGTGCTGGTGCGCTTCGGCGACCTGCGGGTGAGCACCGAGGTGCTGGCC GACGCCGACTGGCTGGCCATGGCGCTGTCGGGCCTGCCGCCCGTGCGAGCGGGCCGGTTCTTCGTCTACGGCGCCCACGA CCGGGGCCTGGCCCCCGCCAGCACCGTGAACCTGCGCATCGAGGCGGGCGCGGCCTTCGGCACCGGCCACCACGGGACCA CCGTGGGCTGCCTGCTGGCCTTCGACGAGCTGCTCAAGGCGCGCCGTTTCCCGAAGGTGCTGGACGTGGGCTGCGGCACC GGGGTGCTGGCCATCGCCGCCGCGCGCACAGGCTCGGAGCTCGCCGTCGGCACCGACATCGACCGCGTCTCGGTCCGCAT CGCCAACGAGAACGCCACGCTGAACCGGGCGGGCGCCGAGTTCGTCCACGCCTCGGGCCTCGGCCATCCCGCGGTCCGCA CCCGCGGCCCGTACGACCTGGTGTTCGCCAACATCCTGGCGCCGCCGCTGGTGGCGCTGTCGCAGGACATCCGCAATGCG CTGAAGCCCGGCGGGCTGGCGATCCTCTCGGGCCTACTGCGGACCCAGGAGCGGCGCGTGCTGGCGGCCTACCTCTCCAA GGGGTTCAAGCTCCAGCGGCGGCTGCACCGGGACGCCTGGGCCACGCTGGTCGTTCGCAGGCCCTGA
Upstream 100 bases:
>100_bases CGCCGCCGCCCGAAGACTCCGAGCTCGCCGAGATGGCGGCGGCGACGCCGGGCTGATCCCCCTCGCCTTTCGCGCGCCGG GCCGCTAGAGGCTCACGCCC
Downstream 100 bases:
>100_bases CGGAACCGCCCAAGGAACCCGCGCCCGAGGAACCCCACAGGGCGAGCGCCGTTCTCAGCCGGAAGGCCAAGCTTGGCCGA GGAGGAGGCTGAGATGACCG
Product: ribosomal protein L11 methyltransferase
Products: NA
Alternate protein names: L11 Mtase [H]
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSDEAVQIIARGPRRIAEAAAAALEAEPATEALTYSILEEDEDHDVWRIDAFPTTDQEREAIAAVLVRFGDLRVSTEVLA DADWLAMALSGLPPVRAGRFFVYGAHDRGLAPASTVNLRIEAGAAFGTGHHGTTVGCLLAFDELLKARRFPKVLDVGCGT GVLAIAAARTGSELAVGTDIDRVSVRIANENATLNRAGAEFVHASGLGHPAVRTRGPYDLVFANILAPPLVALSQDIRNA LKPGGLAILSGLLRTQERRVLAAYLSKGFKLQRRLHRDAWATLVVRRP
Sequences:
>Translated_288_residues MSDEAVQIIARGPRRIAEAAAAALEAEPATEALTYSILEEDEDHDVWRIDAFPTTDQEREAIAAVLVRFGDLRVSTEVLA DADWLAMALSGLPPVRAGRFFVYGAHDRGLAPASTVNLRIEAGAAFGTGHHGTTVGCLLAFDELLKARRFPKVLDVGCGT GVLAIAAARTGSELAVGTDIDRVSVRIANENATLNRAGAEFVHASGLGHPAVRTRGPYDLVFANILAPPLVALSQDIRNA LKPGGLAILSGLLRTQERRVLAAYLSKGFKLQRRLHRDAWATLVVRRP >Mature_287_residues SDEAVQIIARGPRRIAEAAAAALEAEPATEALTYSILEEDEDHDVWRIDAFPTTDQEREAIAAVLVRFGDLRVSTEVLAD ADWLAMALSGLPPVRAGRFFVYGAHDRGLAPASTVNLRIEAGAAFGTGHHGTTVGCLLAFDELLKARRFPKVLDVGCGTG VLAIAAARTGSELAVGTDIDRVSVRIANENATLNRAGAEFVHASGLGHPAVRTRGPYDLVFANILAPPLVALSQDIRNAL KPGGLAILSGLLRTQERRVLAAYLSKGFKLQRRLHRDAWATLVVRRP
Specific function: Methylates ribosomal protein L11 [H]
COG id: COG2264
COG function: function code J; Ribosomal protein L11 methylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. PrmA family [H]
Homologues:
Organism=Escherichia coli, GI2367208, Length=211, Percent_Identity=33.6492890995261, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010456 - InterPro: IPR004498 [H]
Pfam domain/function: PF06325 PrmA [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 30839; Mature: 30707
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDEAVQIIARGPRRIAEAAAAALEAEPATEALTYSILEEDEDHDVWRIDAFPTTDQERE CCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHH AIAAVLVRFGDLRVSTEVLADADWLAMALSGLPPVRAGRFFVYGAHDRGLAPASTVNLRI HHHHHHHHHCCCEEHHHHHHCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEE EAGAAFGTGHHGTTVGCLLAFDELLKARRFPKVLDVGCGTGVLAIAAARTGSELAVGTDI EECCEECCCCCCCHHHHHHHHHHHHHHHCCCHHEECCCCCCHHHEEECCCCCCEEECCCC DRVSVRIANENATLNRAGAEFVHASGLGHPAVRTRGPYDLVFANILAPPLVALSQDIRNA CEEEEEEECCCCEEECCCHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LKPGGLAILSGLLRTQERRVLAAYLSKGFKLQRRLHRDAWATLVVRRP CCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEEEEEECC >Mature Secondary Structure SDEAVQIIARGPRRIAEAAAAALEAEPATEALTYSILEEDEDHDVWRIDAFPTTDQERE CCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHH AIAAVLVRFGDLRVSTEVLADADWLAMALSGLPPVRAGRFFVYGAHDRGLAPASTVNLRI HHHHHHHHHCCCEEHHHHHHCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEE EAGAAFGTGHHGTTVGCLLAFDELLKARRFPKVLDVGCGTGVLAIAAARTGSELAVGTDI EECCEECCCCCCCHHHHHHHHHHHHHHHCCCHHEECCCCCCHHHEEECCCCCCEEECCCC DRVSVRIANENATLNRAGAEFVHASGLGHPAVRTRGPYDLVFANILAPPLVALSQDIRNA CEEEEEEECCCCEEECCCHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LKPGGLAILSGLLRTQERRVLAAYLSKGFKLQRRLHRDAWATLVVRRP CCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: Catalyzes the methylation of ribosomal protein L11 by S-adenosyl methionine [C]
General reaction: Transferases; Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]