Click here to switch to the map view.

The map label for this gene is hcaT [H]

Identifier: 197105734

GI number: 197105734

Start: 2573883

End: 2575046

Strand: Reverse

Name: hcaT [H]

Synonym: PHZ_c2272

Alternate gene names: 197105734

Gene position: 2575046-2573883 (Counterclockwise)

Preceding gene: 197105738

Following gene: 197105733

Centisome position: 64.44

GC content: 72.16

Gene sequence:

>1164_bases
ATGTCGCTCCCCGTCCGGCTGGGCCTGTTCTATTCGGCGATCTTCGTCGGCACGGGGGCGAGCTCGCCCTACATGCCGGT
GTGGTTTGCCGAACGGGGGCTCTCGGGGGCCCAGATCGGCCTGATCCTGTCGCTGCCGATGCTGGCGCGGACGATCACCG
CCCCGCTGCTGGCGATCTGGGCCGACAGCTTCAGGCTCCGCCGCACGGCGCTGATCTTCCTGGCGCTCGGGGTGGCCGGC
ACCTACGGGCTCATGGCGCTGCCGCTGGGTTTCGCCGGCTGGGCGGTGGCCTGGTTCGCGGCCTCCTCCGCCATCTCGAC
CATCTCGCCGCTGACCGACGTGATCGTGCTGCGCAGGGCGCGGCGGGACGGGTTCAACTACGGCTGGCCGCGGGGCATCG
GTTCGGTCGCCTTCATCGTCGCGAACCTGACCGTCGGCTGGCTGCTCGCCCGCGGCTCGCCCGAGCTGGTGCTGGTCTGG
ATCACCGCGGCGGTGTCGCTGACCGCCGTCTGCGCGCGGCTGCTGCTGCCGCCCGACCCGGTGCACGAGGAGGGACATTC
GGCGCGCCTGTCGGACCGGTTCGCCGGGGTCGGAGAGCTGCTGCGCGACCGCGACTTCATGACCGCCGTGTTCGCCGCCG
GCATGATCCAGTCGGCGCACGCATTCTACTACGGCTTCTCGACCCTGGCCTGGAAAGGGCAGGGCATCCCCGAGAGCACC
ACCGGCGTGCTGTGGGCGGTGGGCGTGGCGGTCGAGGTCGGGTTCATGTGGTTCATGGAGCCGTGGCGGCGGCGGATCGG
ACCGCGGCGGCTGCTGGTCCTCGGCGGGGCGGCGGCGGTGATCCGCTGGACCGTCTACGGGTTCTCGCCGCCGCTGTGGC
TGCTGTTCCCGCTGCAGGCGCTGCACGCGCTGAGCTACGCGGCGACCTTCCTGGCGGCGCTGCAATTGGCCGAGCGGCTG
TCCACCCCGCGCAACGCCTCGGCCGCCCAGACCATCAACTCGGCGCTCTCCAGCGGCATGCTGATGGGCCTGGCGACCCT
GGCCTCGGGGCCGCTGTTCGACCGCTTCGGCGCCCAGGGCTACCTGCTGATGGCGGCCATGTGCGCCGTGGGGCTGATCG
GCGCGGTGCGCCTCTACGGCGTCGGACGGCTCGACCCGCCGTAG

Upstream 100 bases:

>100_bases
TCCCGGCTGCCTGTTCCAGCCATCCGCGCCTCCCTCGCTTGTCGTTGGCGCGAGCTTACGTCGCCGCGCGGGCGACCGCG
ACTCCCTGTAGATCGCGGCC

Downstream 100 bases:

>100_bases
GATCGGCGCCTAACCTGCGCCGCGATAGGGAGGCGCGAGCATGACGATCCGGCTCTTCGGCTGCGTGTGCGGCCAGTTCC
ACAGTCCCGGCGCGGGGCTC

Product: permease of the major facilitator superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MSLPVRLGLFYSAIFVGTGASSPYMPVWFAERGLSGAQIGLILSLPMLARTITAPLLAIWADSFRLRRTALIFLALGVAG
TYGLMALPLGFAGWAVAWFAASSAISTISPLTDVIVLRRARRDGFNYGWPRGIGSVAFIVANLTVGWLLARGSPELVLVW
ITAAVSLTAVCARLLLPPDPVHEEGHSARLSDRFAGVGELLRDRDFMTAVFAAGMIQSAHAFYYGFSTLAWKGQGIPEST
TGVLWAVGVAVEVGFMWFMEPWRRRIGPRRLLVLGGAAAVIRWTVYGFSPPLWLLFPLQALHALSYAATFLAALQLAERL
STPRNASAAQTINSALSSGMLMGLATLASGPLFDRFGAQGYLLMAAMCAVGLIGAVRLYGVGRLDPP

Sequences:

>Translated_387_residues
MSLPVRLGLFYSAIFVGTGASSPYMPVWFAERGLSGAQIGLILSLPMLARTITAPLLAIWADSFRLRRTALIFLALGVAG
TYGLMALPLGFAGWAVAWFAASSAISTISPLTDVIVLRRARRDGFNYGWPRGIGSVAFIVANLTVGWLLARGSPELVLVW
ITAAVSLTAVCARLLLPPDPVHEEGHSARLSDRFAGVGELLRDRDFMTAVFAAGMIQSAHAFYYGFSTLAWKGQGIPEST
TGVLWAVGVAVEVGFMWFMEPWRRRIGPRRLLVLGGAAAVIRWTVYGFSPPLWLLFPLQALHALSYAATFLAALQLAERL
STPRNASAAQTINSALSSGMLMGLATLASGPLFDRFGAQGYLLMAAMCAVGLIGAVRLYGVGRLDPP
>Mature_386_residues
SLPVRLGLFYSAIFVGTGASSPYMPVWFAERGLSGAQIGLILSLPMLARTITAPLLAIWADSFRLRRTALIFLALGVAGT
YGLMALPLGFAGWAVAWFAASSAISTISPLTDVIVLRRARRDGFNYGWPRGIGSVAFIVANLTVGWLLARGSPELVLVWI
TAAVSLTAVCARLLLPPDPVHEEGHSARLSDRFAGVGELLRDRDFMTAVFAAGMIQSAHAFYYGFSTLAWKGQGIPESTT
GVLWAVGVAVEVGFMWFMEPWRRRIGPRRLLVLGGAAAVIRWTVYGFSPPLWLLFPLQALHALSYAATFLAALQLAERLS
TPRNASAAQTINSALSSGMLMGLATLASGPLFDRFGAQGYLLMAAMCAVGLIGAVRLYGVGRLDPP

Specific function: Probable permease involved in the uptake of 3- phenylpropionic acid [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacY/rafB permease family. HcaT subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788886, Length=369, Percent_Identity=28.1842818428184, Blast_Score=93, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005276 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41435; Mature: 41304

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPVRLGLFYSAIFVGTGASSPYMPVWFAERGLSGAQIGLILSLPMLARTITAPLLAIW
CCCCHHHHHHHHHHHHCCCCCCCCCEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ADSFRLRRTALIFLALGVAGTYGLMALPLGFAGWAVAWFAASSAISTISPLTDVIVLRRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRDGFNYGWPRGIGSVAFIVANLTVGWLLARGSPELVLVWITAAVSLTAVCARLLLPPDP
HHCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCC
VHEEGHSARLSDRFAGVGELLRDRDFMTAVFAAGMIQSAHAFYYGFSTLAWKGQGIPEST
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC
TGVLWAVGVAVEVGFMWFMEPWRRRIGPRRLLVLGGAAAVIRWTVYGFSPPLWLLFPLQA
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHH
LHALSYAATFLAALQLAERLSTPRNASAAQTINSALSSGMLMGLATLASGPLFDRFGAQG
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCH
YLLMAAMCAVGLIGAVRLYGVGRLDPP
HHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SLPVRLGLFYSAIFVGTGASSPYMPVWFAERGLSGAQIGLILSLPMLARTITAPLLAIW
CCCHHHHHHHHHHHHCCCCCCCCCEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ADSFRLRRTALIFLALGVAGTYGLMALPLGFAGWAVAWFAASSAISTISPLTDVIVLRRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRDGFNYGWPRGIGSVAFIVANLTVGWLLARGSPELVLVWITAAVSLTAVCARLLLPPDP
HHCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCC
VHEEGHSARLSDRFAGVGELLRDRDFMTAVFAAGMIQSAHAFYYGFSTLAWKGQGIPEST
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC
TGVLWAVGVAVEVGFMWFMEPWRRRIGPRRLLVLGGAAAVIRWTVYGFSPPLWLLFPLQA
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHH
LHALSYAATFLAALQLAERLSTPRNASAAQTINSALSSGMLMGLATLASGPLFDRFGAQG
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCH
YLLMAAMCAVGLIGAVRLYGVGRLDPP
HHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]