Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197105716

Identifier: 197105716

GI number: 197105716

Start: 2551943

End: 2554483

Strand: Reverse

Name: 197105716

Synonym: PHZ_c2254

Alternate gene names: NA

Gene position: 2554483-2551943 (Counterclockwise)

Preceding gene: 197105717

Following gene: 197105715

Centisome position: 63.92

GC content: 75.95

Gene sequence:

>2541_bases
ATGGATTTCGGCGGCCCTGCGCTGTCGCCGACGCCCGCGAGCGAGCCCGAGGTCGCGCCGGCCGCCGAGCCGGCCGCGAC
GCCTGAGGCCCTGCCGCCGCTCGATCCTCCCGCTTCGACCGCCCCGGTGGCGACGCGGGAAGCGAAGACCCCGGCGCCAC
GTCCCGAGTTCCAGCCCGAGCCCCGCTACGAGCCGGCGACGCTGGACGAGCTCGAGGCGCCGTCCGGCTGGCCGATCTGG
GTGGCGGCCGTGATCGTCTCGGCGCTGTGGGCGCTGGCGCCGATCGCCTACGCGGTGGGCTACCGCAACAACGTCGCCCC
GCTGCAGGACGACGCCTTCGCCCTGGCCGTCTTCGCCCTCCTGGCCATCGGGCCGGCCGCCTTCGTCTGGGGCGCGGCGT
TCATGATCCGCCAGGGCCAGAAGCTCGCTTTCGAGGCGCGCCGGGCCAAGGCCATGGCCGAGGACATGCTGTCGCCCGCC
GTCGTGGCCGCCGCCCGGGCCGGCCACGTGGCCCAGTCGGTCCGCGACGAGATCGCCCGCGCCGGCGCGGCCGCCGAGGA
CGCCCGCGAGACCCTGCTCGCGCTGCGCGACGCCCTGGCCCTGGAGACCGAGAAGCTGGCCGACGCGACCTCTCAGTCGG
TCCGCACCGCCGAGACCCTGGCCGGGACGCTGGGCCGCGAGCGCAGCGAGATGGGCCAGCTGGCCCAGACCCTGGACGCC
CAGGCCGTCAGGGTCGCCGACGCCATCACCCAGCAGGCCAAGATGGTCGCCGAGGCCGCCGACCTCGCCGAGACCCAGAT
CCGCGAGGCCGAAACCGCGCTCTCGGCCCGCGCCGCCGACCTGGCCGCCGCCGCGGGCGAGGCGAGCGACGCCGCTCGCA
CGGCCGGCGAGGACCTGACCCGCCACATCGCCCGCCTGGAGACCGCCGGCGTGGGCGTCGCCGAGCAGGCGAGGGCGGTT
GAGGCCGGCCTGTCGGAACAGCGCGCGGCGCTGATCACCCTGGCCGCCGCCCTGCGCTCGGACCACGAGAGCTTCTCGTC
CGAGGCCGACGCGCACGCCGCCCGGCTGTCGGAATTCATCACCCAGGCCCGCCTGTCGGCCGCCGAAATGAGCGACCGGG
CGACCAAGGGCGGCGAGGCCCTGCGCCAGCTGATGGCCGACGCGGCGCTGCAGTTCCGCGACCTGGCCGAGACCGCCAAG
GCCGAGCGCGAGGAGTTCGGCCAGTCCACCCTGCACGCGCTGGAGGCCGTCTCGGCCGCCGCCGCGGACCAGCGGGGCAA
GCTGGAGGCCCAGACCCGCGCCGCCATCGACGCCCTCGCGGCCGCGGCCGAGGAGACCCGGGAGGCGGCCGCCCGCCACG
CGGCCACCGCCCGCGAGCAGGTGGACCAGCTCTCGGAGGCGGCCTTCACCGCCGGTCAGAAGGCCAACCAGGTCTTCGAG
GCCCGCCTGGAGGAGGCCCGGGCCCTCGTCGAGCAGTCCTCGAAGATGGTCGAGGAAGCGGGGGCCGCCACGGCGCGGAA
GCTGGACGAGGGCGCCGCCGCCGCCCGGGCCGCGCTGGAGGAGCTGGCTGGCATGCTGGGCGAACTGGAGCAGCGCGCCT
CGCGCCTGCCGGTCGCCGCGCGGGGCCAGGCCGAGCAGGTCAAGGCCGCCGTGGCCCATGGCATGGACGAGCTGATGGAG
CACGCGCGCCGTACGGCCGAGGAGGCCCAGGCGATCGACGCGGCCTTCCAGGAGCGCGTGCGCCGCAACTTCGACATGCT
GTCCGAAGCCGTGCGCCTGATGGGGACGGTCGCCGCCGCGCCCGCACCGCTGCCGCCGCTCGCGGCCGCCCCGCCCCGGC
GGGCGAAGTCCGCGCCCGTCGAGCCGCCGCCGGCCGAGGAGGCCGAACCGCTGGAGCTCAATGAGCTGGCCGACGAGACC
AGCGCCCAGGGCGCATTGGCCGATGACGCCGAGCCGCCGGGCGAGGCGCTGGCCCAGGAACTGGGCGTGCGGGGTCGGCT
GAAGCTGACCCCCACCGCCACCGACCGCGAGTTCAGCGCCGTGTTTTCGGCCGCCGCAGGTCGTCCGGCCGCGCCGGCGC
CCGAAGCCGCGGAGGAGGCGGAGGCCGAGGCTCCGAACGCCTCGGGCGAGACCTGGACCTGGAAGGACCTGCTGGCCTCG
CTGGACGGCGGCGAGGGCGAGGGGGAACGCCTCGAGGACGCCCTGGCGGCCGAGCTGGTCCGAATGGGGGTCGAGCCGGC
CAAGCTCCTGCCGAAGAACCGGATCGACGAGATCGCCGCCGCAGTCCAGACGGGGGACGAGGAGGGCGCGCGCCAGGTCG
TGAAGAAGCTGGCGCCCGCCGCGACCCGCCGCATCGCCCGGCGCCTGTTCACGGACGAGACGGTCAAGCACCAGACCGAG
GTCTACCTGCGGCGCTACAAGACGCTGATCGACGACGCCGTGGTCCGCGACCCGCAGGGCTTCCTGATGGCCGAGCTGCT
GTCGGGAGACGCCGGCCGGCTCTACCTGCTGCTCGACGCGGCCGCCGGGGGGATGCTGTAG

Upstream 100 bases:

>100_bases
GCGCGGTGGGGGCGAGCCATGCCGGCCCCCTCGTGACGCGCGCCTCGGGCCAAGAGGGAAGGATCGGCCGCGCATGAAGT
TCTCCAAGCGGCGACAACCG

Downstream 100 bases:

>100_bases
GGAACCTGGGCGGCGCCGACCCGCGTTAGGCGGATGATGGACCGTGACCGCGCCCACACCGCCTGGAGCCGAGCCGAGCG
CATCCGCCGGCTCTCGGACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 846; Mature: 846

Protein sequence:

>846_residues
MDFGGPALSPTPASEPEVAPAAEPAATPEALPPLDPPASTAPVATREAKTPAPRPEFQPEPRYEPATLDELEAPSGWPIW
VAAVIVSALWALAPIAYAVGYRNNVAPLQDDAFALAVFALLAIGPAAFVWGAAFMIRQGQKLAFEARRAKAMAEDMLSPA
VVAAARAGHVAQSVRDEIARAGAAAEDARETLLALRDALALETEKLADATSQSVRTAETLAGTLGRERSEMGQLAQTLDA
QAVRVADAITQQAKMVAEAADLAETQIREAETALSARAADLAAAAGEASDAARTAGEDLTRHIARLETAGVGVAEQARAV
EAGLSEQRAALITLAAALRSDHESFSSEADAHAARLSEFITQARLSAAEMSDRATKGGEALRQLMADAALQFRDLAETAK
AEREEFGQSTLHALEAVSAAAADQRGKLEAQTRAAIDALAAAAEETREAAARHAATAREQVDQLSEAAFTAGQKANQVFE
ARLEEARALVEQSSKMVEEAGAATARKLDEGAAAARAALEELAGMLGELEQRASRLPVAARGQAEQVKAAVAHGMDELME
HARRTAEEAQAIDAAFQERVRRNFDMLSEAVRLMGTVAAAPAPLPPLAAAPPRRAKSAPVEPPPAEEAEPLELNELADET
SAQGALADDAEPPGEALAQELGVRGRLKLTPTATDREFSAVFSAAAGRPAAPAPEAAEEAEAEAPNASGETWTWKDLLAS
LDGGEGEGERLEDALAAELVRMGVEPAKLLPKNRIDEIAAAVQTGDEEGARQVVKKLAPAATRRIARRLFTDETVKHQTE
VYLRRYKTLIDDAVVRDPQGFLMAELLSGDAGRLYLLLDAAAGGML

Sequences:

>Translated_846_residues
MDFGGPALSPTPASEPEVAPAAEPAATPEALPPLDPPASTAPVATREAKTPAPRPEFQPEPRYEPATLDELEAPSGWPIW
VAAVIVSALWALAPIAYAVGYRNNVAPLQDDAFALAVFALLAIGPAAFVWGAAFMIRQGQKLAFEARRAKAMAEDMLSPA
VVAAARAGHVAQSVRDEIARAGAAAEDARETLLALRDALALETEKLADATSQSVRTAETLAGTLGRERSEMGQLAQTLDA
QAVRVADAITQQAKMVAEAADLAETQIREAETALSARAADLAAAAGEASDAARTAGEDLTRHIARLETAGVGVAEQARAV
EAGLSEQRAALITLAAALRSDHESFSSEADAHAARLSEFITQARLSAAEMSDRATKGGEALRQLMADAALQFRDLAETAK
AEREEFGQSTLHALEAVSAAAADQRGKLEAQTRAAIDALAAAAEETREAAARHAATAREQVDQLSEAAFTAGQKANQVFE
ARLEEARALVEQSSKMVEEAGAATARKLDEGAAAARAALEELAGMLGELEQRASRLPVAARGQAEQVKAAVAHGMDELME
HARRTAEEAQAIDAAFQERVRRNFDMLSEAVRLMGTVAAAPAPLPPLAAAPPRRAKSAPVEPPPAEEAEPLELNELADET
SAQGALADDAEPPGEALAQELGVRGRLKLTPTATDREFSAVFSAAAGRPAAPAPEAAEEAEAEAPNASGETWTWKDLLAS
LDGGEGEGERLEDALAAELVRMGVEPAKLLPKNRIDEIAAAVQTGDEEGARQVVKKLAPAATRRIARRLFTDETVKHQTE
VYLRRYKTLIDDAVVRDPQGFLMAELLSGDAGRLYLLLDAAAGGML
>Mature_846_residues
MDFGGPALSPTPASEPEVAPAAEPAATPEALPPLDPPASTAPVATREAKTPAPRPEFQPEPRYEPATLDELEAPSGWPIW
VAAVIVSALWALAPIAYAVGYRNNVAPLQDDAFALAVFALLAIGPAAFVWGAAFMIRQGQKLAFEARRAKAMAEDMLSPA
VVAAARAGHVAQSVRDEIARAGAAAEDARETLLALRDALALETEKLADATSQSVRTAETLAGTLGRERSEMGQLAQTLDA
QAVRVADAITQQAKMVAEAADLAETQIREAETALSARAADLAAAAGEASDAARTAGEDLTRHIARLETAGVGVAEQARAV
EAGLSEQRAALITLAAALRSDHESFSSEADAHAARLSEFITQARLSAAEMSDRATKGGEALRQLMADAALQFRDLAETAK
AEREEFGQSTLHALEAVSAAAADQRGKLEAQTRAAIDALAAAAEETREAAARHAATAREQVDQLSEAAFTAGQKANQVFE
ARLEEARALVEQSSKMVEEAGAATARKLDEGAAAARAALEELAGMLGELEQRASRLPVAARGQAEQVKAAVAHGMDELME
HARRTAEEAQAIDAAFQERVRRNFDMLSEAVRLMGTVAAAPAPLPPLAAAPPRRAKSAPVEPPPAEEAEPLELNELADET
SAQGALADDAEPPGEALAQELGVRGRLKLTPTATDREFSAVFSAAAGRPAAPAPEAAEEAEAEAPNASGETWTWKDLLAS
LDGGEGEGERLEDALAAELVRMGVEPAKLLPKNRIDEIAAAVQTGDEEGARQVVKKLAPAATRRIARRLFTDETVKHQTE
VYLRRYKTLIDDAVVRDPQGFLMAELLSGDAGRLYLLLDAAAGGML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88774; Mature: 88774

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFGGPALSPTPASEPEVAPAAEPAATPEALPPLDPPASTAPVATREAKTPAPRPEFQPE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PRYEPATLDELEAPSGWPIWVAAVIVSALWALAPIAYAVGYRNNVAPLQDDAFALAVFAL
CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LAIGPAAFVWGAAFMIRQGQKLAFEARRAKAMAEDMLSPAVVAAARAGHVAQSVRDEIAR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGAAAEDARETLLALRDALALETEKLADATSQSVRTAETLAGTLGRERSEMGQLAQTLDA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAVRVADAITQQAKMVAEAADLAETQIREAETALSARAADLAAAAGEASDAARTAGEDLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RHIARLETAGVGVAEQARAVEAGLSEQRAALITLAAALRSDHESFSSEADAHAARLSEFI
HHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQARLSAAEMSDRATKGGEALRQLMADAALQFRDLAETAKAEREEFGQSTLHALEAVSAA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AADQRGKLEAQTRAAIDALAAAAEETREAAARHAATAREQVDQLSEAAFTAGQKANQVFE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ARLEEARALVEQSSKMVEEAGAATARKLDEGAAAARAALEELAGMLGELEQRASRLPVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RGQAEQVKAAVAHGMDELMEHARRTAEEAQAIDAAFQERVRRNFDMLSEAVRLMGTVAAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PAPLPPLAAAPPRRAKSAPVEPPPAEEAEPLELNELADETSAQGALADDAEPPGEALAQE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LGVRGRLKLTPTATDREFSAVFSAAAGRPAAPAPEAAEEAEAEAPNASGETWTWKDLLAS
HCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCEEHHHHHHH
LDGGEGEGERLEDALAAELVRMGVEPAKLLPKNRIDEIAAAVQTGDEEGARQVVKKLAPA
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ATRRIARRLFTDETVKHQTEVYLRRYKTLIDDAVVRDPQGFLMAELLSGDAGRLYLLLDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEC
AAGGML
CCCCCC
>Mature Secondary Structure
MDFGGPALSPTPASEPEVAPAAEPAATPEALPPLDPPASTAPVATREAKTPAPRPEFQPE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PRYEPATLDELEAPSGWPIWVAAVIVSALWALAPIAYAVGYRNNVAPLQDDAFALAVFAL
CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LAIGPAAFVWGAAFMIRQGQKLAFEARRAKAMAEDMLSPAVVAAARAGHVAQSVRDEIAR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGAAAEDARETLLALRDALALETEKLADATSQSVRTAETLAGTLGRERSEMGQLAQTLDA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAVRVADAITQQAKMVAEAADLAETQIREAETALSARAADLAAAAGEASDAARTAGEDLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RHIARLETAGVGVAEQARAVEAGLSEQRAALITLAAALRSDHESFSSEADAHAARLSEFI
HHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQARLSAAEMSDRATKGGEALRQLMADAALQFRDLAETAKAEREEFGQSTLHALEAVSAA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AADQRGKLEAQTRAAIDALAAAAEETREAAARHAATAREQVDQLSEAAFTAGQKANQVFE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ARLEEARALVEQSSKMVEEAGAATARKLDEGAAAARAALEELAGMLGELEQRASRLPVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RGQAEQVKAAVAHGMDELMEHARRTAEEAQAIDAAFQERVRRNFDMLSEAVRLMGTVAAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PAPLPPLAAAPPRRAKSAPVEPPPAEEAEPLELNELADETSAQGALADDAEPPGEALAQE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LGVRGRLKLTPTATDREFSAVFSAAAGRPAAPAPEAAEEAEAEAPNASGETWTWKDLLAS
HCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCEEHHHHHHH
LDGGEGEGERLEDALAAELVRMGVEPAKLLPKNRIDEIAAAVQTGDEEGARQVVKKLAPA
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ATRRIARRLFTDETVKHQTEVYLRRYKTLIDDAVVRDPQGFLMAELLSGDAGRLYLLLDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEC
AAGGML
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA