| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197105713
Identifier: 197105713
GI number: 197105713
Start: 2548224
End: 2550167
Strand: Direct
Name: 197105713
Synonym: PHZ_c2251
Alternate gene names: NA
Gene position: 2548224-2550167 (Clockwise)
Preceding gene: 197105712
Following gene: 197105719
Centisome position: 63.77
GC content: 72.94
Gene sequence:
>1944_bases ATGGCGGCCACTTCGTGCAGGAGGACAGCCCCGCCGAGATCGCCGGGCTGCTCGACGGCCTCATCCGCCGCAGCCGCTGA GGGACCTCCCCATGAAGGTCGAGAACGCCGTCCTGCCCGCCCCCGCCCAGATGATGGACTTCTTCGGCGCGCCCGAGGAC GGCCCCTTCATCATGGTCAACCTGCTGAAGTTCAACGACAGGGCGGAATACGAGGACGGCTCGGACGCTCACCTCACCGG GGCCGAGGCCTACGCCCGCTATGGCGAAGCCGTGCGCCAGCTCGTCGAGGGGCTGGGTGGGAAGATTCGCTACGCCGGCA GGGTCACCGGCCTGCTGCTGGGCGAGGTCGAGGAGCTGTGGGACGCGGTCGCCCTCGCCGAATACCCGTCGCTGGCGGCG TTCCGGGACATGGCGCTGTCGCCGCAGATGCAGGCCATCGAGCACCACCGCAAGGCGGGCCTCGCCGGCCAGCTCAACAT CCGAACGAAGCCCAACGACAGCTTCTAGCCGGGCTCGCGCAGCACCGTGCGGAAGCCGATGTGCCCCGCCCCGCCGTCGG GCGGGCCCGGCGTACGGGCCGCCGGCCGGTAGCGGAAGCAGTAGTCGTCCGAGCAGAGGTACGAGCCGCCCTTGATGACG TGCTTGGCGAGACCCGGTTCGGCCGGATCGTAGGCCAGCGCCTGCGGCGGGCCTTCCGGATCGGCGCCCAGGCCCGGCCG GTACCAGTCGCGGGTCCACTCCCAGACATTGCCGGCCATGTCGAAGAGCCCGTAACCGTTCGGGGGATAGCACCCGACCG GGGCGGGTTGCGCCTTGTGACCGTCCTGCCCGATGTCTTTGACGGGGAATATGCCCTGCCAGGTGTTGGCCTTCGGACCG CCCTCCGCCGCGGGAGCGTCGCCCCAGGCGTAGCGTGCGCCCGCCAGGCCGCCGCGGGCGGCGTACTCCCACTCGGCCTC CGTCGGCAGGTCCCGGCCGAGCCAGCGGGCGTAGGCGAGCGCGTCCTCGTAGGCCACGTGGACGACGGGCCAGGCCTCCT TGCCCTCGATCGAGCTGCCGGGCCCGGTCGGATGGCGCCAGTCCGCGCCGGGCGTGACGCGCCACCAGCGGCCGGGATCG TCCGACTTGCCCGCCGCGCCCACGAACACCAGCGAGGCCGGCCGGCGCTGCTGCGCGCTCAGGTGTTGATAGGCGACCGG GTCCAGCGGCCGCTCGGCCAGGGTCCGGTAGCCGGTGGCCGCCACGAACCGCGCGAAGGCGGCGTTGGTCACCTCCGTCC GGTCGATCCAGAAGGTCCCGACAGTTGTTGGCCGCTCAGGCCCCTCCTCGGGCAGGACGGCGGCCGCGCCCTGGCGGAAC TCGCCGCCGGTGATCCGCACCATGCCGGCGGTCGAGCCGGGCGCCGGCAGGGGCGCGTCGGCCAGGCACGCGCGCGGCGC CTCGGTCCTCTGGCACGCGGCCGCCAGGAGGCCCGCCACGGCGAGGGGCAGGAGGCGCCGCATCGGGCTCAGTTGTCCCA GAGGACGTACTCGTCGCCCGGCTGCTGCTTCGCCCCGCCCGGCTTGTCGACGAGGATCGGCCCCTGCAGCAGCGAGGGCC AGATCGGCTTGGCGCTCTGGGCGTCCTGCTCGCGAATCAGGGCCAGCATGGCCTTCACCCGCCCCGGCTCGGCCTTCGAC AGGTCGCGCCGCTCGGTCGGATCCTCGGCCAGGTTGAACAGCCAGACCTTGCCCAGCGCCTCGTTGCTCTGGAGCTTCCA GTCCCCGTCCAGCACCGTCTTGTACTGGCCGCTGCGCCAGAACAGCGTCTGGTGCGGCCGTCCCGCCGTCCGTCCCTGGA CGTGCGGCAGCAGGTCGACCCCGTCCACGGTCCGGTCGGCCGGGATCTCGGCGCCGGCCGCGGCGGCGGCCGTGGCGAAG ATGTCCACGTGCCCCACCGGATAG
Upstream 100 bases:
>100_bases GTGACCGCCTTCAGCGACGGCGACCCGATCACCAAGGGCGGCGAGGTCCCGTTCCGCGAGCGCGTGCCGGGCGCCCGGGG CCAGCCGCACGTCACGCTGC
Downstream 100 bases:
>100_bases GGGAAGCGCGAGCCCGCCGGGATCACGCCCGGCCAGCGCATGAAGAACGGCGCCTTGATACCGCCCTCGAAGAACGTCGA CTTCCAACCGCGATAGGGTT
Product: PE-PGRS family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 647; Mature: 646
Protein sequence:
>647_residues MAATSCRRTAPPRSPGCSTASSAAAAEGPPHEGRERRPARPRPDDGLLRRARGRPLHHGQPAEVQRQGGIRGRLGRSPHR GRGLRPLWRSRAPARRGAGWEDSLRRQGHRPAAGRGRGAVGRGRPRRIPVAGGVPGHGAVAADAGHRAPPQGGPRRPAQH PNEAQRQLLAGLAQHRAEADVPRPAVGRARRTGRRPVAEAVVVRAEVRAALDDVLGETRFGRIVGQRLRRAFRIGAQARP VPVAGPLPDIAGHVEEPVTVRGIAPDRGGLRLVTVLPDVFDGEYALPGVGLRTALRRGSVAPGVACARQAAAGGVLPLGL RRQVPAEPAGVGERVLVGHVDDGPGLLALDRAAGPGRMAPVRAGRDAPPAAGIVRLARRAHEHQRGRPALLRAQVLIGDR VQRPLGQGPVAGGRHEPREGGVGHLRPVDPEGPDSCWPLRPLLGQDGGRALAELAAGDPHHAGGRAGRRQGRVGQARARR LGPLARGRQEARHGEGQEAPHRAQLSQRTYSSPGCCFAPPGLSTRIGPCSSEGQIGLALWASCSRIRASMAFTRPGSAFD RSRRSVGSSARLNSQTLPSASLLWSFQSPSSTVLYWPLRQNSVWCGRPAVRPWTCGSRSTPSTVRSAGISAPAAAAAVAK MSTCPTG
Sequences:
>Translated_647_residues MAATSCRRTAPPRSPGCSTASSAAAAEGPPHEGRERRPARPRPDDGLLRRARGRPLHHGQPAEVQRQGGIRGRLGRSPHR GRGLRPLWRSRAPARRGAGWEDSLRRQGHRPAAGRGRGAVGRGRPRRIPVAGGVPGHGAVAADAGHRAPPQGGPRRPAQH PNEAQRQLLAGLAQHRAEADVPRPAVGRARRTGRRPVAEAVVVRAEVRAALDDVLGETRFGRIVGQRLRRAFRIGAQARP VPVAGPLPDIAGHVEEPVTVRGIAPDRGGLRLVTVLPDVFDGEYALPGVGLRTALRRGSVAPGVACARQAAAGGVLPLGL RRQVPAEPAGVGERVLVGHVDDGPGLLALDRAAGPGRMAPVRAGRDAPPAAGIVRLARRAHEHQRGRPALLRAQVLIGDR VQRPLGQGPVAGGRHEPREGGVGHLRPVDPEGPDSCWPLRPLLGQDGGRALAELAAGDPHHAGGRAGRRQGRVGQARARR LGPLARGRQEARHGEGQEAPHRAQLSQRTYSSPGCCFAPPGLSTRIGPCSSEGQIGLALWASCSRIRASMAFTRPGSAFD RSRRSVGSSARLNSQTLPSASLLWSFQSPSSTVLYWPLRQNSVWCGRPAVRPWTCGSRSTPSTVRSAGISAPAAAAAVAK MSTCPTG >Mature_646_residues AATSCRRTAPPRSPGCSTASSAAAAEGPPHEGRERRPARPRPDDGLLRRARGRPLHHGQPAEVQRQGGIRGRLGRSPHRG RGLRPLWRSRAPARRGAGWEDSLRRQGHRPAAGRGRGAVGRGRPRRIPVAGGVPGHGAVAADAGHRAPPQGGPRRPAQHP NEAQRQLLAGLAQHRAEADVPRPAVGRARRTGRRPVAEAVVVRAEVRAALDDVLGETRFGRIVGQRLRRAFRIGAQARPV PVAGPLPDIAGHVEEPVTVRGIAPDRGGLRLVTVLPDVFDGEYALPGVGLRTALRRGSVAPGVACARQAAAGGVLPLGLR RQVPAEPAGVGERVLVGHVDDGPGLLALDRAAGPGRMAPVRAGRDAPPAAGIVRLARRAHEHQRGRPALLRAQVLIGDRV QRPLGQGPVAGGRHEPREGGVGHLRPVDPEGPDSCWPLRPLLGQDGGRALAELAAGDPHHAGGRAGRRQGRVGQARARRL GPLARGRQEARHGEGQEAPHRAQLSQRTYSSPGCCFAPPGLSTRIGPCSSEGQIGLALWASCSRIRASMAFTRPGSAFDR SRRSVGSSARLNSQTLPSASLLWSFQSPSSTVLYWPLRQNSVWCGRPAVRPWTCGSRSTPSTVRSAGISAPAAAAAVAKM STCPTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68039; Mature: 67908
Theoretical pI: Translated: 12.37; Mature: 12.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATSCRRTAPPRSPGCSTASSAAAAEGPPHEGRERRPARPRPDDGLLRRARGRPLHHGQ CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC PAEVQRQGGIRGRLGRSPHRGRGLRPLWRSRAPARRGAGWEDSLRRQGHRPAAGRGRGAV CHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCHHCCCCHHHHHHHCCCCCCCCCCCCCC GRGRPRRIPVAGGVPGHGAVAADAGHRAPPQGGPRRPAQHPNEAQRQLLAGLAQHRAEAD CCCCCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC VPRPAVGRARRTGRRPVAEAVVVRAEVRAALDDVLGETRFGRIVGQRLRRAFRIGAQARP CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VPVAGPLPDIAGHVEEPVTVRGIAPDRGGLRLVTVLPDVFDGEYALPGVGLRTALRRGSV CCCCCCCHHHHHHCCCCEEEEECCCCCCCEEEEEECCHHCCCCCCCCCCHHHHHHHCCCC APGVACARQAAAGGVLPLGLRRQVPAEPAGVGERVLVGHVDDGPGLLALDRAAGPGRMAP CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCC VRAGRDAPPAAGIVRLARRAHEHQRGRPALLRAQVLIGDRVQRPLGQGPVAGGRHEPREG CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GVGHLRPVDPEGPDSCWPLRPLLGQDGGRALAELAAGDPHHAGGRAGRRQGRVGQARARR CCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHH LGPLARGRQEARHGEGQEAPHRAQLSQRTYSSPGCCFAPPGLSTRIGPCSSEGQIGLALW HCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHH ASCSRIRASMAFTRPGSAFDRSRRSVGSSARLNSQTLPSASLLWSFQSPSSTVLYWPLRQ HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHEEEEECCCCCEEEEEECCC NSVWCGRPAVRPWTCGSRSTPSTVRSAGISAPAAAAAVAKMSTCPTG CCEECCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure AATSCRRTAPPRSPGCSTASSAAAAEGPPHEGRERRPARPRPDDGLLRRARGRPLHHGQ CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC PAEVQRQGGIRGRLGRSPHRGRGLRPLWRSRAPARRGAGWEDSLRRQGHRPAAGRGRGAV CHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCHHCCCCHHHHHHHCCCCCCCCCCCCCC GRGRPRRIPVAGGVPGHGAVAADAGHRAPPQGGPRRPAQHPNEAQRQLLAGLAQHRAEAD CCCCCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC VPRPAVGRARRTGRRPVAEAVVVRAEVRAALDDVLGETRFGRIVGQRLRRAFRIGAQARP CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VPVAGPLPDIAGHVEEPVTVRGIAPDRGGLRLVTVLPDVFDGEYALPGVGLRTALRRGSV CCCCCCCHHHHHHCCCCEEEEECCCCCCCEEEEEECCHHCCCCCCCCCCHHHHHHHCCCC APGVACARQAAAGGVLPLGLRRQVPAEPAGVGERVLVGHVDDGPGLLALDRAAGPGRMAP CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCC VRAGRDAPPAAGIVRLARRAHEHQRGRPALLRAQVLIGDRVQRPLGQGPVAGGRHEPREG CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GVGHLRPVDPEGPDSCWPLRPLLGQDGGRALAELAAGDPHHAGGRAGRRQGRVGQARARR CCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHH LGPLARGRQEARHGEGQEAPHRAQLSQRTYSSPGCCFAPPGLSTRIGPCSSEGQIGLALW HCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHH ASCSRIRASMAFTRPGSAFDRSRRSVGSSARLNSQTLPSASLLWSFQSPSSTVLYWPLRQ HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHEEEEECCCCCEEEEEECCC NSVWCGRPAVRPWTCGSRSTPSTVRSAGISAPAAAAAVAKMSTCPTG CCEECCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA