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The map label for this gene is fecI [C]

Identifier: 197105695

GI number: 197105695

Start: 2526836

End: 2527372

Strand: Direct

Name: fecI [C]

Synonym: PHZ_c2233

Alternate gene names: 197105695

Gene position: 2526836-2527372 (Clockwise)

Preceding gene: 197105693

Following gene: 197105696

Centisome position: 63.23

GC content: 75.42

Gene sequence:

>537_bases
ATGGCCGGTCGGGGCAAATCGGCGGCGCGCGACCCGCTCCTCGACGTCTATCTGGAGCGTCGGGAGACGCTCGTGCGCTT
CCTGGCGGCGCGGGCGGGCTCGCGCGCGGCGGGCGAGGACCTCGCCCAGGAGCTCTACATCCGGATCGCCGGCCGCGATC
CGGCCGCCGGCGCCGACAATCCACTGGCCCTGCTCTACCGGATGGCCCTGAACCTGGCGCTGGACCGCGCGCGCGGCGAG
CGCCGCGCCGCCGCCCGCGAGGCCGCCTGGCGCGAGACCGCCCATACGCGCATCGGGGCCGTGGACGTGGCCGACGAGCC
CCCAGCCGACGAGGCGGTGGCCTCGCGCCAGCGCCTGCGCCGGATGATCGAGGCCGTGGCCGAGCTGCCGCCCCAGGCGC
AGCGGGCCTTCCGGCTGCACAAGCTGGAGGGCCTCTCGCACGCCGAGACCGCCCGGGCGATGGGGCTGTCCGTGAAGTCC
GTCGAGAAGCACGTCAGCGCCGCGCTGAAGTCGCTCACCGCGAAGTTGGGTGCATGA

Upstream 100 bases:

>100_bases
TGCACGCCCTCACCCTGGGTGAGGCATCCGCCGACGGACGAATCGCCAGGTGGGTTGGCGGCCGGTTGGCGCGGCGCTGC
GAATGGGGCATGTCTCCCCC

Downstream 100 bases:

>100_bases
TCTACCATAAATTGCATGCCCCGACCGGGGGGCGCATCCTGGCGGCGGCGTCTAGTCAGGTGAAGGGCCGCCGGGGGCGG
CTGCGGGAAGGATCATGAAC

Product: RNA polymerase sigma-70 factor, ECF subfamily

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma Factor FecI; RNA Polymerase Sigma-24 Factor; ECF Subfamily RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma-24 Subunit Ecf Subfamily; Sigma-; RNA Polymerase Sigma Factor Sigma-70 Family Protein; PpiC-Type Peptidyl-Prolyl Cis-Trans Isomerase; ECF Subfamily RNA Polymerase Sigma-70 Factor; ECF Sigma Factor; RNA Polymerase Sigma Factor Sigma-70 Family; RNA Polymerase ECF-Subfamily Sigma-70 Factor; RNA Polymerase Sigma Factor FecI Family

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MAGRGKSAARDPLLDVYLERRETLVRFLAARAGSRAAGEDLAQELYIRIAGRDPAAGADNPLALLYRMALNLALDRARGE
RRAAAREAAWRETAHTRIGAVDVADEPPADEAVASRQRLRRMIEAVAELPPQAQRAFRLHKLEGLSHAETARAMGLSVKS
VEKHVSAALKSLTAKLGA

Sequences:

>Translated_178_residues
MAGRGKSAARDPLLDVYLERRETLVRFLAARAGSRAAGEDLAQELYIRIAGRDPAAGADNPLALLYRMALNLALDRARGE
RRAAAREAAWRETAHTRIGAVDVADEPPADEAVASRQRLRRMIEAVAELPPQAQRAFRLHKLEGLSHAETARAMGLSVKS
VEKHVSAALKSLTAKLGA
>Mature_177_residues
AGRGKSAARDPLLDVYLERRETLVRFLAARAGSRAAGEDLAQELYIRIAGRDPAAGADNPLALLYRMALNLALDRARGER
RAAAREAAWRETAHTRIGAVDVADEPPADEAVASRQRLRRMIEAVAELPPQAQRAFRLHKLEGLSHAETARAMGLSVKSV
EKHVSAALKSLTAKLGA

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19279; Mature: 19148

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRGKSAARDPLLDVYLERRETLVRFLAARAGSRAAGEDLAQELYIRIAGRDPAAGADN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
PLALLYRMALNLALDRARGERRAAAREAAWRETAHTRIGAVDVADEPPADEAVASRQRLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHH
RMIEAVAELPPQAQRAFRLHKLEGLSHAETARAMGLSVKSVEKHVSAALKSLTAKLGA
HHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGRGKSAARDPLLDVYLERRETLVRFLAARAGSRAAGEDLAQELYIRIAGRDPAAGADN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
PLALLYRMALNLALDRARGERRAAAREAAWRETAHTRIGAVDVADEPPADEAVASRQRLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHH
RMIEAVAELPPQAQRAFRLHKLEGLSHAETARAMGLSVKSVEKHVSAALKSLTAKLGA
HHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA