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The map label for this gene is capD [H]

Identifier: 197105693

GI number: 197105693

Start: 2522394

End: 2524331

Strand: Direct

Name: capD [H]

Synonym: PHZ_c2231

Alternate gene names: 197105693

Gene position: 2522394-2524331 (Clockwise)

Preceding gene: 197105692

Following gene: 197105695

Centisome position: 63.12

GC content: 71.47

Gene sequence:

>1938_bases
ATGGAGCGTGTGGCTTTCCGGGCCCAGACCGTCGTCGCCGACGTCGCTCTCGCCGCCCTCGCCTTCGCCCTGGCCTTCAT
CGTCGCGCGCACCCAGCCCGTCTTCGCGCTCGACGACCTGCCGCTGACGCGGTTCCTGCAGCTCACCTTCGTCTACGGCG
CCATCGCCGGCGTGTTCGCCCTGCTCTTCCGGCGCGAGCTCTCGCCCTGGCGCTACGTCTCGATCCCCGACGTCCTCGTG
CTGGCGCGCAGCGCCCTGCTGACGGTGGGCGTCTTCCTGCTGGGCGTCTTCGTGCTGAACCGGGCCCAGGGCCTGCCCCG
CTCGGCGCTGTTCATGGCGCCGATGTTCCAGATGGTCTTCTCCATGGGCGTGCGGATCGTCCGCCGGGCGCTGCACGAAC
ACGCCCTGGACAGCTTCTCGCCGCTCAAGACGGTCACCGACCGGATGGCCCAGGCGCCGACCCTGCTGCTGATCGGGCCG
CCCTCGCTGGCCGACACCTACCTGCGCGACGTCGCGCGCAGCCACGACCGCACCTACACGCCCGTGGGCATCGTCACGAC
CGAGAAGCGCGACGTGGGCCAGCAGGTCCGCGGCGTCTGCATCCTCGACACCCTGGAGCGGCTGGACGAGGCCCTGGCCG
AGCTGCGCCGCTGGAACCGCTACCCGCGGGCGATCCTGTTCCTCGAGGAGCCGGCGCGCCTGAAGGGCCTCACCGCCGAC
CAGCTCGGCCGGCTGAAGAACGACGGCATCCGCCTGCTGCGCCTGCCGTCCATCGTCGAGCTGCCGCAGCACGACAGCGT
CACCCTGCTGCCGATGCGCGACATCAACATCGAGGAGCTGCTGGCCCGCGACCCCATCGAGCTGGACCGGGGGGCGATCG
CCAAGCTGATCCGCGGCCGGCGCGTGCTGGTCACCGGCGCCGGCGGCTCGATCGGCGCCGAGCTGTGCCGCCAGGTGGCC
GCCTTCGACTGCGCGCACCTGACCCTGCTCGACATCTCCGAGACCGCGCTGTTCGAGATCGAGCGCGAGATGCGCGAGAC
CTTCCCGCACATCCCGCGCAAGGCGGTGCTGTGCGACGTCCGCATCGCCCACAAGCTTGAGGCGGCCTTCCGGGCCGAGG
CGCCCGACCTCGTCTTCCATGCGGCGGCCCTGAAGCACGTCTCCATGGTCGAGCAGCATCCCAGCGAGGGCGTGCTCACC
AACGTCATCGGCACCTGGAACGTGACCGAGGCGGCCAAGGCCTGCGGGGCCGGCCAGATGGTGCTGATCTCCACCGACAA
GGCCGTGGACCCGTCGAACGTGATGGGCGCCACCAAGCGGCTCGCCGAGGCGGTGATCCAGGCCCAGCAGTCCAGCGCCA
AGGGCACGCGCTTCTCGGCCGTGCGCTTCGGCAACGTCCTGGGCTCGGCCGGATCGGTGGTGCCGATCTTCAAGTCGCAG
ATCGAGCGCGGCGGGCCGGTCACCATCACCCATCCCGAGATGGAACGGTTCTTCATGACCATTCCGGAGGCCGCGCAGCT
GGTGCTGCACGCCACCGCCACCTCGGCCGAGGGCGAGGCGCGGGACGCCCGGCTGTTCCTGCTCGAGATGGGCGAGCCGG
TGCGGATCATGGATCTCGCCCGCCAGATGATCGCCCTCTCCGGCCGCACCCCCGGCCGCGACATCGAGATCGAGATCACC
GGCCTGCGTCCGGGCGAGAAGCTGACCGAGGCCCTGCTGGACGAGACCGAGAGCGCGGTCCCCTGCGCGCCCAAGGTGCT
GGAGGTGATCACCAACTCGGCCCTGCGGGTCACCCCGGGACACCTGGCCGAGCTGGAGGCCCTGGCCAGCCGCGGCGCCG
TGGACGAGGTGCGCGCCGCCCTCTTCGCCCTCGTGGCCCAAGTCCGCGGCGAGAAGCCGGGCGGCGCCCCCAACCTGCGG
GTCATCGCCGGCGGCTGA

Upstream 100 bases:

>100_bases
ACCCCGAACGCGCCGGACATAGGGCCGCGGCGGGGGCGTTCCCGGCCGGGCGCTCCGGCGTATGGTCTGCGAATTCGGAA
GGTTAGGCGGAGTGCGACGC

Downstream 100 bases:

>100_bases
GCCCGCGGCTGGGGCCTCAAGTCCGGCCTCACGCCGGACCTCACGTCGGGGAGTTCATCCCCGGCCCGCCGTCTGCTAAA
GGCCGGCCATGGGTTACGCA

Product: UDP-D-quinovosamine 4-dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 645; Mature: 645

Protein sequence:

>645_residues
MERVAFRAQTVVADVALAALAFALAFIVARTQPVFALDDLPLTRFLQLTFVYGAIAGVFALLFRRELSPWRYVSIPDVLV
LARSALLTVGVFLLGVFVLNRAQGLPRSALFMAPMFQMVFSMGVRIVRRALHEHALDSFSPLKTVTDRMAQAPTLLLIGP
PSLADTYLRDVARSHDRTYTPVGIVTTEKRDVGQQVRGVCILDTLERLDEALAELRRWNRYPRAILFLEEPARLKGLTAD
QLGRLKNDGIRLLRLPSIVELPQHDSVTLLPMRDINIEELLARDPIELDRGAIAKLIRGRRVLVTGAGGSIGAELCRQVA
AFDCAHLTLLDISETALFEIEREMRETFPHIPRKAVLCDVRIAHKLEAAFRAEAPDLVFHAAALKHVSMVEQHPSEGVLT
NVIGTWNVTEAAKACGAGQMVLISTDKAVDPSNVMGATKRLAEAVIQAQQSSAKGTRFSAVRFGNVLGSAGSVVPIFKSQ
IERGGPVTITHPEMERFFMTIPEAAQLVLHATATSAEGEARDARLFLLEMGEPVRIMDLARQMIALSGRTPGRDIEIEIT
GLRPGEKLTEALLDETESAVPCAPKVLEVITNSALRVTPGHLAELEALASRGAVDEVRAALFALVAQVRGEKPGGAPNLR
VIAGG

Sequences:

>Translated_645_residues
MERVAFRAQTVVADVALAALAFALAFIVARTQPVFALDDLPLTRFLQLTFVYGAIAGVFALLFRRELSPWRYVSIPDVLV
LARSALLTVGVFLLGVFVLNRAQGLPRSALFMAPMFQMVFSMGVRIVRRALHEHALDSFSPLKTVTDRMAQAPTLLLIGP
PSLADTYLRDVARSHDRTYTPVGIVTTEKRDVGQQVRGVCILDTLERLDEALAELRRWNRYPRAILFLEEPARLKGLTAD
QLGRLKNDGIRLLRLPSIVELPQHDSVTLLPMRDINIEELLARDPIELDRGAIAKLIRGRRVLVTGAGGSIGAELCRQVA
AFDCAHLTLLDISETALFEIEREMRETFPHIPRKAVLCDVRIAHKLEAAFRAEAPDLVFHAAALKHVSMVEQHPSEGVLT
NVIGTWNVTEAAKACGAGQMVLISTDKAVDPSNVMGATKRLAEAVIQAQQSSAKGTRFSAVRFGNVLGSAGSVVPIFKSQ
IERGGPVTITHPEMERFFMTIPEAAQLVLHATATSAEGEARDARLFLLEMGEPVRIMDLARQMIALSGRTPGRDIEIEIT
GLRPGEKLTEALLDETESAVPCAPKVLEVITNSALRVTPGHLAELEALASRGAVDEVRAALFALVAQVRGEKPGGAPNLR
VIAGG
>Mature_645_residues
MERVAFRAQTVVADVALAALAFALAFIVARTQPVFALDDLPLTRFLQLTFVYGAIAGVFALLFRRELSPWRYVSIPDVLV
LARSALLTVGVFLLGVFVLNRAQGLPRSALFMAPMFQMVFSMGVRIVRRALHEHALDSFSPLKTVTDRMAQAPTLLLIGP
PSLADTYLRDVARSHDRTYTPVGIVTTEKRDVGQQVRGVCILDTLERLDEALAELRRWNRYPRAILFLEEPARLKGLTAD
QLGRLKNDGIRLLRLPSIVELPQHDSVTLLPMRDINIEELLARDPIELDRGAIAKLIRGRRVLVTGAGGSIGAELCRQVA
AFDCAHLTLLDISETALFEIEREMRETFPHIPRKAVLCDVRIAHKLEAAFRAEAPDLVFHAAALKHVSMVEQHPSEGVLT
NVIGTWNVTEAAKACGAGQMVLISTDKAVDPSNVMGATKRLAEAVIQAQQSSAKGTRFSAVRFGNVLGSAGSVVPIFKSQ
IERGGPVTITHPEMERFFMTIPEAAQLVLHATATSAEGEARDARLFLLEMGEPVRIMDLARQMIALSGRTPGRDIEIEIT
GLRPGEKLTEALLDETESAVPCAPKVLEVITNSALRVTPGHLAELEALASRGAVDEVRAALFALVAQVRGEKPGGAPNLR
VIAGG

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 70254; Mature: 70254

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVAFRAQTVVADVALAALAFALAFIVARTQPVFALDDLPLTRFLQLTFVYGAIAGVFA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHH
LLFRRELSPWRYVSIPDVLVLARSALLTVGVFLLGVFVLNRAQGLPRSALFMAPMFQMVF
HHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SMGVRIVRRALHEHALDSFSPLKTVTDRMAQAPTLLLIGPPSLADTYLRDVARSHDRTYT
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCC
PVGIVTTEKRDVGQQVRGVCILDTLERLDEALAELRRWNRYPRAILFLEEPARLKGLTAD
CEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHCCCCHH
QLGRLKNDGIRLLRLPSIVELPQHDSVTLLPMRDINIEELLARDPIELDRGAIAKLIRGR
HHHCHHCCCEEEEECCCHHCCCCCCCEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHCCC
RVLVTGAGGSIGAELCRQVAAFDCAHLTLLDISETALFEIEREMRETFPHIPRKAVLCDV
EEEEECCCCHHHHHHHHHHHHHCHHHEEEEECCHHHHHHHHHHHHHHCCCCCCHHHEEHH
RIAHKLEAAFRAEAPDLVFHAAALKHVSMVEQHPSEGVLTNVIGTWNVTEAAKACGAGQM
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHCCCCCE
VLISTDKAVDPSNVMGATKRLAEAVIQAQQSSAKGTRFSAVRFGNVLGSAGSVVPIFKSQ
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCHHHHHHH
IERGGPVTITHPEMERFFMTIPEAAQLVLHATATSAEGEARDARLFLLEMGEPVRIMDLA
HCCCCCEEEECHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHH
RQMIALSGRTPGRDIEIEITGLRPGEKLTEALLDETESAVPCAPKVLEVITNSALRVTPG
HHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEECCC
HLAELEALASRGAVDEVRAALFALVAQVRGEKPGGAPNLRVIAGG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
>Mature Secondary Structure
MERVAFRAQTVVADVALAALAFALAFIVARTQPVFALDDLPLTRFLQLTFVYGAIAGVFA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHH
LLFRRELSPWRYVSIPDVLVLARSALLTVGVFLLGVFVLNRAQGLPRSALFMAPMFQMVF
HHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SMGVRIVRRALHEHALDSFSPLKTVTDRMAQAPTLLLIGPPSLADTYLRDVARSHDRTYT
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCC
PVGIVTTEKRDVGQQVRGVCILDTLERLDEALAELRRWNRYPRAILFLEEPARLKGLTAD
CEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHCCCCHH
QLGRLKNDGIRLLRLPSIVELPQHDSVTLLPMRDINIEELLARDPIELDRGAIAKLIRGR
HHHCHHCCCEEEEECCCHHCCCCCCCEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHCCC
RVLVTGAGGSIGAELCRQVAAFDCAHLTLLDISETALFEIEREMRETFPHIPRKAVLCDV
EEEEECCCCHHHHHHHHHHHHHCHHHEEEEECCHHHHHHHHHHHHHHCCCCCCHHHEEHH
RIAHKLEAAFRAEAPDLVFHAAALKHVSMVEQHPSEGVLTNVIGTWNVTEAAKACGAGQM
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHCCCCCE
VLISTDKAVDPSNVMGATKRLAEAVIQAQQSSAKGTRFSAVRFGNVLGSAGSVVPIFKSQ
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCHHHHHHH
IERGGPVTITHPEMERFFMTIPEAAQLVLHATATSAEGEARDARLFLLEMGEPVRIMDLA
HCCCCCEEEECHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHH
RQMIALSGRTPGRDIEIEITGLRPGEKLTEALLDETESAVPCAPKVLEVITNSALRVTPG
HHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEECCC
HLAELEALASRGAVDEVRAALFALVAQVRGEKPGGAPNLRVIAGG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]