| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197105676
Identifier: 197105676
GI number: 197105676
Start: 2502358
End: 2503863
Strand: Reverse
Name: 197105676
Synonym: PHZ_c2213
Alternate gene names: NA
Gene position: 2503863-2502358 (Counterclockwise)
Preceding gene: 197105677
Following gene: 197105675
Centisome position: 62.66
GC content: 74.5
Gene sequence:
>1506_bases ATGCCAAGCTTCACGCGCCGCCGGTCCCTGGCCCTCCTGGCCGCCGCCGGCGCCGCTCCCGCCGCCGCGGGGCGGGCGGC GCGGGCGCAGGCGCCGGACCCTGCCGGCCTGCTGCCGGCGGAGGCGGTGCGGGCGGATCTGCGCCACCTCTACGAGACGC TGGAGGCGGGCCACTACGACCTGTTCGCCCATCGCAGCCGCGCCGAGTACGAGGCGCAGCTGGCGCGCCTGACGGCCGGG GTGGACCGGCCGCTGACGCGTCGCGAGGCGGCCGGGACGCTGCAGAAGCTCGCCGCCTACGGCCGAATCGGCCATGCCCG CCTGGAGGCGCCGGCGGAAGAGTTCGTCGCCCACATCCGCGCGGGCGGGACCTTCCTGCCGATCTTCGTCCGCGTGGACG GGACGCGCGTCCGCCTGACGCGAACGGCGGACGCTGCTGGCGAGCTGGCCGCCGGGACCGAACTGCTGTCCATCGAGGGC GAGCCCGCCCACGCCTGGCTGGAGCGGCTGGGCGCCTATGTCTCGGCCGAGCGGCCGTACATGGCCCACGCGCAGATGGA GCAGAGCTTCCCGGCCCTGCTGTGGGTCGAGCTGGGCGAGCGGGACGCGCTGACGGTGACGGTTCGCGGGCCTGAGGGGG CGGTGGTCCGGCGCCGGGTCGCGGCGGTGACCTATCCGCAGCTCGGCGAGATCGGGCGGGCGCATCCGACGCCCCGGATC GGCGCCGATTTCAACGCCCGCGAGGTGAGGCTGCTGGGGGATGGGATCGCCTATCTGCGGCCCGGCCCGTTCATGAACAC CGCGGCCGACGCGGCCGGACCGTCTCCCTCGTACGAGGACAGCGCCTACCGCGCCTTCCTGGACGCGGCGTTCGGGACGA TCCTGACGTCGGGAGCCTCGGACCTGATCGTCGACCTGCGCGACAATCCCGGCGGGGACAACAGCTTCAGCGACGCCATG GTCGCCTGGTTCGCCGACCGGCCGTTCCGGTTCGCCTCGCGGTTCATGCTGAAGGCGAGCGCGCCGACCAAGGCCTGGTA TGCGCGCCAGCGCGCGGAGGATCCGGCGCCCGACCGGATGCTGGCGCGGCTGATGGCGGCCGAGGCGGCCCAGCCGAACG GCGTCCGCTACGCCTTCGAGATCCCGCTGACGCCGCCGCGGGCCGGCCCCCGCTACGAGGGGCGGGTGTGGGCGCTGGTG AACCGCCACAGCTATTCGAACGCCACGTCCGTGGCGGCCCTAATCCAGGACTACGGCTTCGGGACGGTGCTGGGCGAGGA GACCGCGGACGTGCCGACGACCTACGCCTCGACCGTGCACTTCGAGCTGCCGCACACCGGCTACAGCGTCTCGTACCCGA AGAGCTGGTTCGTGCGCCCCAGCGGCGACGAGACCCTGCGCGGCGTGGTCCCGGACACGCCGCTGGCGCGCCAGCCCATC GGGGACGCCGAGGACCGCATGCTGGCGGCGGCGGTGGCGCACGTGCGCGAGACGCGGCCTCGCTGA
Upstream 100 bases:
>100_bases AGCTGGACATCGCGGCGCTGGAGGCGGCGGCGCGGGGTTGAGTCCCCGGCGGCGAGTCCACCGCTGTTGAAGCGGCCGGC GGGGAGGGCTACTGCGAAAT
Downstream 100 bases:
>100_bases CGTCGCCTGGCCGCGCGGCGAGGGCTCAGCCGCGCCCGTCGGCCTCGCGGTCGGCGTTCAGGTCGGCGAGGTCATCCCGA TTGTCGTTGGTGCGCCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MPSFTRRRSLALLAAAGAAPAAAGRAARAQAPDPAGLLPAEAVRADLRHLYETLEAGHYDLFAHRSRAEYEAQLARLTAG VDRPLTRREAAGTLQKLAAYGRIGHARLEAPAEEFVAHIRAGGTFLPIFVRVDGTRVRLTRTADAAGELAAGTELLSIEG EPAHAWLERLGAYVSAERPYMAHAQMEQSFPALLWVELGERDALTVTVRGPEGAVVRRRVAAVTYPQLGEIGRAHPTPRI GADFNAREVRLLGDGIAYLRPGPFMNTAADAAGPSPSYEDSAYRAFLDAAFGTILTSGASDLIVDLRDNPGGDNSFSDAM VAWFADRPFRFASRFMLKASAPTKAWYARQRAEDPAPDRMLARLMAAEAAQPNGVRYAFEIPLTPPRAGPRYEGRVWALV NRHSYSNATSVAALIQDYGFGTVLGEETADVPTTYASTVHFELPHTGYSVSYPKSWFVRPSGDETLRGVVPDTPLARQPI GDAEDRMLAAAVAHVRETRPR
Sequences:
>Translated_501_residues MPSFTRRRSLALLAAAGAAPAAAGRAARAQAPDPAGLLPAEAVRADLRHLYETLEAGHYDLFAHRSRAEYEAQLARLTAG VDRPLTRREAAGTLQKLAAYGRIGHARLEAPAEEFVAHIRAGGTFLPIFVRVDGTRVRLTRTADAAGELAAGTELLSIEG EPAHAWLERLGAYVSAERPYMAHAQMEQSFPALLWVELGERDALTVTVRGPEGAVVRRRVAAVTYPQLGEIGRAHPTPRI GADFNAREVRLLGDGIAYLRPGPFMNTAADAAGPSPSYEDSAYRAFLDAAFGTILTSGASDLIVDLRDNPGGDNSFSDAM VAWFADRPFRFASRFMLKASAPTKAWYARQRAEDPAPDRMLARLMAAEAAQPNGVRYAFEIPLTPPRAGPRYEGRVWALV NRHSYSNATSVAALIQDYGFGTVLGEETADVPTTYASTVHFELPHTGYSVSYPKSWFVRPSGDETLRGVVPDTPLARQPI GDAEDRMLAAAVAHVRETRPR >Mature_500_residues PSFTRRRSLALLAAAGAAPAAAGRAARAQAPDPAGLLPAEAVRADLRHLYETLEAGHYDLFAHRSRAEYEAQLARLTAGV DRPLTRREAAGTLQKLAAYGRIGHARLEAPAEEFVAHIRAGGTFLPIFVRVDGTRVRLTRTADAAGELAAGTELLSIEGE PAHAWLERLGAYVSAERPYMAHAQMEQSFPALLWVELGERDALTVTVRGPEGAVVRRRVAAVTYPQLGEIGRAHPTPRIG ADFNAREVRLLGDGIAYLRPGPFMNTAADAAGPSPSYEDSAYRAFLDAAFGTILTSGASDLIVDLRDNPGGDNSFSDAMV AWFADRPFRFASRFMLKASAPTKAWYARQRAEDPAPDRMLARLMAAEAAQPNGVRYAFEIPLTPPRAGPRYEGRVWALVN RHSYSNATSVAALIQDYGFGTVLGEETADVPTTYASTVHFELPHTGYSVSYPKSWFVRPSGDETLRGVVPDTPLARQPIG DAEDRMLAAAVAHVRETRPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54265; Mature: 54133
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSFTRRRSLALLAAAGAAPAAAGRAARAQAPDPAGLLPAEAVRADLRHLYETLEAGHYD CCCCHHHHHEEEEEECCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE LFAHRSRAEYEAQLARLTAGVDRPLTRREAAGTLQKLAAYGRIGHARLEAPAEEFVAHIR EHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHH AGGTFLPIFVRVDGTRVRLTRTADAAGELAAGTELLSIEGEPAHAWLERLGAYVSAERPY CCCEEEEEEEEECCCEEEEEECCCCCCCHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCC MAHAQMEQSFPALLWVELGERDALTVTVRGPEGAVVRRRVAAVTYPQLGEIGRAHPTPRI HHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHHCCCCCHHCCCCCCCCCCC GADFNAREVRLLGDGIAYLRPGPFMNTAADAAGPSPSYEDSAYRAFLDAAFGTILTSGAS CCCCCCCEEEEEECCCCEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC DLIVDLRDNPGGDNSFSDAMVAWFADRPFRFASRFMLKASAPTKAWYARQRAEDPAPDRM EEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHEECCCCHHHHHHHHHCCCCCHHHH LARLMAAEAAQPNGVRYAFEIPLTPPRAGPRYEGRVWALVNRHSYSNATSVAALIQDYGF HHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCC GTVLGEETADVPTTYASTVHFELPHTGYSVSYPKSWFVRPSGDETLRGVVPDTPLARQPI CEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCCCCCCC GDAEDRMLAAAVAHVRETRPR CCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PSFTRRRSLALLAAAGAAPAAAGRAARAQAPDPAGLLPAEAVRADLRHLYETLEAGHYD CCCHHHHHEEEEEECCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE LFAHRSRAEYEAQLARLTAGVDRPLTRREAAGTLQKLAAYGRIGHARLEAPAEEFVAHIR EHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHH AGGTFLPIFVRVDGTRVRLTRTADAAGELAAGTELLSIEGEPAHAWLERLGAYVSAERPY CCCEEEEEEEEECCCEEEEEECCCCCCCHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCC MAHAQMEQSFPALLWVELGERDALTVTVRGPEGAVVRRRVAAVTYPQLGEIGRAHPTPRI HHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHHCCCCCHHCCCCCCCCCCC GADFNAREVRLLGDGIAYLRPGPFMNTAADAAGPSPSYEDSAYRAFLDAAFGTILTSGAS CCCCCCCEEEEEECCCCEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC DLIVDLRDNPGGDNSFSDAMVAWFADRPFRFASRFMLKASAPTKAWYARQRAEDPAPDRM EEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHEECCCCHHHHHHHHHCCCCCHHHH LARLMAAEAAQPNGVRYAFEIPLTPPRAGPRYEGRVWALVNRHSYSNATSVAALIQDYGF HHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCC GTVLGEETADVPTTYASTVHFELPHTGYSVSYPKSWFVRPSGDETLRGVVPDTPLARQPI CEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCCCCCCC GDAEDRMLAAAVAHVRETRPR CCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA