Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197105675

Identifier: 197105675

GI number: 197105675

Start: 2500195

End: 2501535

Strand: Reverse

Name: 197105675

Synonym: PHZ_c2212

Alternate gene names: NA

Gene position: 2501535-2500195 (Counterclockwise)

Preceding gene: 197105676

Following gene: 197105674

Centisome position: 62.6

GC content: 72.41

Gene sequence:

>1341_bases
GTGAGCCGTCGGCGGACGCGGGAGAAGGGGCTGCCGCTGACCTGGGAGCCGCGGCCGCACCAGGTGGAGCTGTGGGAGAC
CCTGGTGGACGGCTGCCGCCGGGCCGACGTGGCGGCGCATCGGCGCTGGGGCAAGGACGAGGTGGCGCTGCAGTGGGCGG
CGGTGGAGGCGCTGGAGAAGCCCGGCGTCTACTGGCACCTGCTGCCCGAGGCGGCGCAGGGGCGCAAGGCGATCTGGGAC
GCGGTGAACCCGCACACGGGCGTGCGGCGGATTAACGAGGCCTTCCCGATCCACGTGCGCAAGCGGACCCTGGACCAGGA
GATGAAGGTCGAGCTGAACAACGGCTCGGTCTGGCAGGTGGTGGGATCGGACAACTACGACAGCCTGGTGGGCTCCTCGC
CGCGGGGCGTGGTCTTTTCGGAGTGGTCGCTGTCGAAGCCGCAGGCCTGGGGGTTCATCCGGCCGATCCTGGCCGAGAAC
GGCGGCTGGGCGCTGTTCCTCTGGACGCCGCGGGGGCGCAACCACGCCACGCGCGCCTTCGAGAGCCGGCAGCGGGAAGC
GGGCTGGTTCTGCCTGAAGTCCCCGGCCACGGACACCGAGGTGTTCACGAAGGCGCAGCTGGACCAGGAGCGGGCCGAGC
TGATCGCCGAGCTGGGCTCGCGGGAGGAGGGGGAGGCGCGCTTCGCCTCGGAGTACCTGGTGGACTTCGACGCCGCCGCG
CCGGGCGCCTACTACGCGACGCTGCTGGGCGAGGCCGAACGCGCGGGGCGGATCGGCCGGGTTCCCTGGGATCCAGCCGC
CCGTGTGGACACCGCCTGGGACCTCGGGATCGACGACTACACGGCGATCTGGTTCTTCCAGCAGGTGGGCCGGGAGGTCC
GCGCGATCGACTATTTCGAGACCAGCGGCGAGGGCCTGCCAGAGATCGTCCGCCAGGCGATCGGGAGCAAGCCGTACCTG
TGGGGGACCCACCACCTGCCGCACGACGTGATGGTGCGCGAGCTGGCGACCGGCCGCTCGCGCTACGAGACGCTGGCCTC
GCTGGGGATGTCGGGGATCGCGGTGGGACAGGCGGCGGACCCGGAGGAGCGGGTGAACGCGGCGCGGCTGATGATCCCGC
TCACCTGGTTCGACGCGGATGCCTGCCACCAGGGGCTCGAACGGCTGCGGACCTACCGCAAGCGGTGGAGCCGCGCGACC
CACAGCTACGCCGGACCGCTGCACGACCAGGCCAGCCACGGAGCGGACGCCTTCGGGGAATTCGCCATGCACCGGCGTGG
GGCGGCCGAGCCGCGACGGGCGGTGCGGAGCGCGGGCGGGCCGCTGTCCTGGATGGGCTAG

Upstream 100 bases:

>100_bases
CGCAGGTCACCTACTACATCCGTCGCTTCGAGAAGTACGTGGGCGAGGACGGCCGCACCTATGTGCGCGAGGTCCCGCGC
GAGCCCAAGCGGAGGCGCAA

Downstream 100 bases:

>100_bases
ACGGCAAGGCGCCCCCGGCTTCGAGGCCGGGGGCGCCGTCCGGTGACACTGCGGCGCGCAGTCGGGGGCTCGTCGGCGCC
GCAGCACCGTAACCCGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: PBSX Family Phage Terminase Large Subunit; Terminase Large Subunit Protein; Phage Terminase Large Subunit PBSX; Phage Terminase Large Subunit PBSX Family; Terminase Large Subunit; Phage Terminase; Phage Related Protein; Phage Terminase Large Subunit Pbsx; DNA Packaging Protein GP; DNA Packaging Protein Gp

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MSRRRTREKGLPLTWEPRPHQVELWETLVDGCRRADVAAHRRWGKDEVALQWAAVEALEKPGVYWHLLPEAAQGRKAIWD
AVNPHTGVRRINEAFPIHVRKRTLDQEMKVELNNGSVWQVVGSDNYDSLVGSSPRGVVFSEWSLSKPQAWGFIRPILAEN
GGWALFLWTPRGRNHATRAFESRQREAGWFCLKSPATDTEVFTKAQLDQERAELIAELGSREEGEARFASEYLVDFDAAA
PGAYYATLLGEAERAGRIGRVPWDPAARVDTAWDLGIDDYTAIWFFQQVGREVRAIDYFETSGEGLPEIVRQAIGSKPYL
WGTHHLPHDVMVRELATGRSRYETLASLGMSGIAVGQAADPEERVNAARLMIPLTWFDADACHQGLERLRTYRKRWSRAT
HSYAGPLHDQASHGADAFGEFAMHRRGAAEPRRAVRSAGGPLSWMG

Sequences:

>Translated_446_residues
MSRRRTREKGLPLTWEPRPHQVELWETLVDGCRRADVAAHRRWGKDEVALQWAAVEALEKPGVYWHLLPEAAQGRKAIWD
AVNPHTGVRRINEAFPIHVRKRTLDQEMKVELNNGSVWQVVGSDNYDSLVGSSPRGVVFSEWSLSKPQAWGFIRPILAEN
GGWALFLWTPRGRNHATRAFESRQREAGWFCLKSPATDTEVFTKAQLDQERAELIAELGSREEGEARFASEYLVDFDAAA
PGAYYATLLGEAERAGRIGRVPWDPAARVDTAWDLGIDDYTAIWFFQQVGREVRAIDYFETSGEGLPEIVRQAIGSKPYL
WGTHHLPHDVMVRELATGRSRYETLASLGMSGIAVGQAADPEERVNAARLMIPLTWFDADACHQGLERLRTYRKRWSRAT
HSYAGPLHDQASHGADAFGEFAMHRRGAAEPRRAVRSAGGPLSWMG
>Mature_445_residues
SRRRTREKGLPLTWEPRPHQVELWETLVDGCRRADVAAHRRWGKDEVALQWAAVEALEKPGVYWHLLPEAAQGRKAIWDA
VNPHTGVRRINEAFPIHVRKRTLDQEMKVELNNGSVWQVVGSDNYDSLVGSSPRGVVFSEWSLSKPQAWGFIRPILAENG
GWALFLWTPRGRNHATRAFESRQREAGWFCLKSPATDTEVFTKAQLDQERAELIAELGSREEGEARFASEYLVDFDAAAP
GAYYATLLGEAERAGRIGRVPWDPAARVDTAWDLGIDDYTAIWFFQQVGREVRAIDYFETSGEGLPEIVRQAIGSKPYLW
GTHHLPHDVMVRELATGRSRYETLASLGMSGIAVGQAADPEERVNAARLMIPLTWFDADACHQGLERLRTYRKRWSRATH
SYAGPLHDQASHGADAFGEFAMHRRGAAEPRRAVRSAGGPLSWMG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50216; Mature: 50085

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRRTREKGLPLTWEPRPHQVELWETLVDGCRRADVAAHRRWGKDEVALQWAAVEALEK
CCCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
PGVYWHLLPEAAQGRKAIWDAVNPHTGVRRINEAFPIHVRKRTLDQEMKVELNNGSVWQV
CCCEEEECCCHHCCHHHHHHCCCCCHHHHHHHHCCCEEEHHHHCCCCCEEEECCCCEEEE
VGSDNYDSLVGSSPRGVVFSEWSLSKPQAWGFIRPILAENGGWALFLWTPRGRNHATRAF
ECCCCHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHHHHH
ESRQREAGWFCLKSPATDTEVFTKAQLDQERAELIAELGSREEGEARFASEYLVDFDAAA
HHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
PGAYYATLLGEAERAGRIGRVPWDPAARVDTAWDLGIDDYTAIWFFQQVGREVRAIDYFE
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCHHHEEHEEC
TSGEGLPEIVRQAIGSKPYLWGTHHLPHDVMVRELATGRSRYETLASLGMSGIAVGQAAD
CCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCEEECCCCC
PEERVNAARLMIPLTWFDADACHQGLERLRTYRKRWSRATHSYAGPLHDQASHGADAFGE
HHHHHCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHH
FAMHRRGAAEPRRAVRSAGGPLSWMG
HHHHHCCCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SRRRTREKGLPLTWEPRPHQVELWETLVDGCRRADVAAHRRWGKDEVALQWAAVEALEK
CCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
PGVYWHLLPEAAQGRKAIWDAVNPHTGVRRINEAFPIHVRKRTLDQEMKVELNNGSVWQV
CCCEEEECCCHHCCHHHHHHCCCCCHHHHHHHHCCCEEEHHHHCCCCCEEEECCCCEEEE
VGSDNYDSLVGSSPRGVVFSEWSLSKPQAWGFIRPILAENGGWALFLWTPRGRNHATRAF
ECCCCHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHHHHH
ESRQREAGWFCLKSPATDTEVFTKAQLDQERAELIAELGSREEGEARFASEYLVDFDAAA
HHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
PGAYYATLLGEAERAGRIGRVPWDPAARVDTAWDLGIDDYTAIWFFQQVGREVRAIDYFE
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCHHHEEHEEC
TSGEGLPEIVRQAIGSKPYLWGTHHLPHDVMVRELATGRSRYETLASLGMSGIAVGQAAD
CCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCEEECCCCC
PEERVNAARLMIPLTWFDADACHQGLERLRTYRKRWSRATHSYAGPLHDQASHGADAFGE
HHHHHCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHH
FAMHRRGAAEPRRAVRSAGGPLSWMG
HHHHHCCCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA