| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197105663
Identifier: 197105663
GI number: 197105663
Start: 2485121
End: 2485606
Strand: Reverse
Name: 197105663
Synonym: PHZ_c2200
Alternate gene names: NA
Gene position: 2485606-2485121 (Counterclockwise)
Preceding gene: 197105664
Following gene: 197105662
Centisome position: 62.2
GC content: 72.22
Gene sequence:
>486_bases GTGCGGGGCGCAGATCCGCCGCATCAAGGGCGACGGAACGGGCGAGGAGGACTGAGACGCATGGGCGAGACCGGCCCCCT GAGACTTCTGGCGCAGGACGCCGACGATCTGGCGGTGCTGTCCGCCGCGCTCCAAGACGCGGTCGGGAAGGTTGGGGACA TCCGCTACGAGCCCAGGGCGCGCCAGCTGACCGTCGCCTTCAACCGGTTCCGCTGGGAGGCGGGGACCCGGCAGCGGGTC CGCTCGGCCCTGCAGTTGGGCGGCGTGCTGAAGGTGCAGGCGCGCAACGTCCGTCGCGACAGGCCGGACGCCGTGATCGA ACTCCTGGCCCTGACCTTCGAGCCGGGCGAGGAGCCGGGCGGGATCGTCATGCTCAGCTTCGCCGGGGGCGGCGACCTCA GGGCCGAAGTGGAGTGTGTGGACGCCGTGCTGGCGGACGTCTCGCAGCCCTGGCCCACGCCGCGCACGCCCGCGCACGAA TCCTAA
Upstream 100 bases:
>100_bases GCCTGGTGATCGCCGGCCTTGCGGCCCGAGGCGAAACGGTCGTCAACCGCGTTTACCACCTCGACCGCGGTTTCGAGCGC CTGGAAGAGAAGCTTGGCGC
Downstream 100 bases:
>100_bases GCGGCGTAGCGTTCCGCCGCTCGCGCCGTTAAAGAGGCGCGCCATGCGCCGTTTCGCCTTCACAGACCCGGGCTTCCAAG AGGCTTTCGCCGCGTTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MRGADPPHQGRRNGRGGLRRMGETGPLRLLAQDADDLAVLSAALQDAVGKVGDIRYEPRARQLTVAFNRFRWEAGTRQRV RSALQLGGVLKVQARNVRRDRPDAVIELLALTFEPGEEPGGIVMLSFAGGGDLRAEVECVDAVLADVSQPWPTPRTPAHE S
Sequences:
>Translated_161_residues MRGADPPHQGRRNGRGGLRRMGETGPLRLLAQDADDLAVLSAALQDAVGKVGDIRYEPRARQLTVAFNRFRWEAGTRQRV RSALQLGGVLKVQARNVRRDRPDAVIELLALTFEPGEEPGGIVMLSFAGGGDLRAEVECVDAVLADVSQPWPTPRTPAHE S >Mature_161_residues MRGADPPHQGRRNGRGGLRRMGETGPLRLLAQDADDLAVLSAALQDAVGKVGDIRYEPRARQLTVAFNRFRWEAGTRQRV RSALQLGGVLKVQARNVRRDRPDAVIELLALTFEPGEEPGGIVMLSFAGGGDLRAEVECVDAVLADVSQPWPTPRTPAHE S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17513; Mature: 17513
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGADPPHQGRRNGRGGLRRMGETGPLRLLAQDADDLAVLSAALQDAVGKVGDIRYEPRA CCCCCCCCCCCCCCCCHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCC RQLTVAFNRFRWEAGTRQRVRSALQLGGVLKVQARNVRRDRPDAVIELLALTFEPGEEPG HHHEEHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC GIVMLSFAGGGDLRAEVECVDAVLADVSQPWPTPRTPAHES CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MRGADPPHQGRRNGRGGLRRMGETGPLRLLAQDADDLAVLSAALQDAVGKVGDIRYEPRA CCCCCCCCCCCCCCCCHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCC RQLTVAFNRFRWEAGTRQRVRSALQLGGVLKVQARNVRRDRPDAVIELLALTFEPGEEPG HHHEEHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC GIVMLSFAGGGDLRAEVECVDAVLADVSQPWPTPRTPAHES CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA