| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is hisD [H]
Identifier: 197105662
GI number: 197105662
Start: 2483788
End: 2485077
Strand: Reverse
Name: hisD [H]
Synonym: PHZ_c2199
Alternate gene names: 197105662
Gene position: 2485077-2483788 (Counterclockwise)
Preceding gene: 197105663
Following gene: 197105661
Centisome position: 62.19
GC content: 73.18
Gene sequence:
>1290_bases ATGCGCCGTTTCGCCTTCACAGACCCGGGCTTCCAAGAGGCTTTCGCCGCGTTCGTCGCCGAGCGCCGCGATACGCCCGA GGACGTGGACGCGGTCGTAAGGGACGTGCTGGCGGCCGTGCGGAGCGAGGGGCTGGACGCCCTACTGCGTTTCACGCGCG ACTTCGACCGCGTCGACGTCACCGAGGAAACCATACGCGTCTCGGCGGCCGAGATCGCCGAAGGCGCGGCGGCATGTCCT GCGGAGGTTCGCGAGGCGATCGCCTTCGCTGCGGCCCGAATCCGCGCCTATCACGAGCGGCAGCGACCGGCGGACCAGCG GTTCACCGACGAGGCGGGCGTGGAGCTCGGCTGGCGTTGGACGCCGCTCGACGCCGTAGGGATCTATGTCCCCGGGGGGA GGGCGGCCTATCCCTCGACCGTGCTGATGAACGCCGTCCCGGCGGCTGCGGCCGGCGTCGGCCGGATCGCCATGGTGACG CCGCCCGGCCGGCTGCAGCCTGCGGTGCTCGCCGCGGCGCAGGCCGCCGGCGTGACCGAGATCTGGCGGGTGGGCGGCGC CCAGGCCGTGGCGGCGCTGGCCTATGGCGCGGGCCCCATCCGGCCGGTCGATAAGATCGTCGGGCCCGGCAACGCCTTCG TGACCGCGGCCAAGCGGCGGGTCTACGGCGTCGTGGGCATCGACGCGCTCGCCGGCCCTTCCGAAATCGTCGTCGTCGCG GACGGTGCGAACGACCCGGACTGGATCGCAGCCGACCTGCTGTCCCAGGCCGAACACGACCCCGCCGCCCAATCCATCCT GATCACCGACGACGCCGCCTTCGCCGAGCGGGTGGTCAGGGCGGTCGAGGCGCAACTCGCGACCCTCGCCACCGGCGAGG ACGCCGCCGCCTCGTGGCGCGATCACGGCGCGATCGTCATGGCGCCGCTGGACGAGGCTCCGGGCCTGGTCGATTTCATC GCCCCCGAACACGTGGAGTTCGCCGTGGAGGCGCCCGAGCGGCTGGCCGATCGCGTCCGGCACGCCGGGGCGATCTTCCT CGGCCGGCATGCGCCGGAGGCCGTGGGCGACTATGTCGCCGGATCGAACCACGTCCTGCCGACCAGCCGGGCGGCGCGGT TTTCCTCTGGCCTTTCCCTCTTCGACTTCCTCAAGCGCACCTCGTTCGTGAAGTGCGACCCCGCGGCCTTCGCCGCCCTC GCGCCCGCCACCATCGCCCTGGCCGAGGCCGAGGGGCTGCCGGCCCATGCCCGGTCCGCCTCCATCCGCCTGGAGCCGCC GGGCGGCTGA
Upstream 100 bases:
>100_bases CTGGCGGACGTCTCGCAGCCCTGGCCCACGCCGCGCACGCCCGCGCACGAATCCTAAGCGGCGTAGCGTTCCGCCGCTCG CGCCGTTAAAGAGGCGCGCC
Downstream 100 bases:
>100_bases ACGCCCGTTCGGAAAGCTGAACAATTCCTGTCGAACGGGCTCCGGACCCGTTCAGGCCAAGCTCCCTACCGTCGCGAAAT CGGATCACGCGAAGGACGGA
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MRRFAFTDPGFQEAFAAFVAERRDTPEDVDAVVRDVLAAVRSEGLDALLRFTRDFDRVDVTEETIRVSAAEIAEGAAACP AEVREAIAFAAARIRAYHERQRPADQRFTDEAGVELGWRWTPLDAVGIYVPGGRAAYPSTVLMNAVPAAAAGVGRIAMVT PPGRLQPAVLAAAQAAGVTEIWRVGGAQAVAALAYGAGPIRPVDKIVGPGNAFVTAAKRRVYGVVGIDALAGPSEIVVVA DGANDPDWIAADLLSQAEHDPAAQSILITDDAAFAERVVRAVEAQLATLATGEDAAASWRDHGAIVMAPLDEAPGLVDFI APEHVEFAVEAPERLADRVRHAGAIFLGRHAPEAVGDYVAGSNHVLPTSRAARFSSGLSLFDFLKRTSFVKCDPAAFAAL APATIALAEAEGLPAHARSASIRLEPPGG
Sequences:
>Translated_429_residues MRRFAFTDPGFQEAFAAFVAERRDTPEDVDAVVRDVLAAVRSEGLDALLRFTRDFDRVDVTEETIRVSAAEIAEGAAACP AEVREAIAFAAARIRAYHERQRPADQRFTDEAGVELGWRWTPLDAVGIYVPGGRAAYPSTVLMNAVPAAAAGVGRIAMVT PPGRLQPAVLAAAQAAGVTEIWRVGGAQAVAALAYGAGPIRPVDKIVGPGNAFVTAAKRRVYGVVGIDALAGPSEIVVVA DGANDPDWIAADLLSQAEHDPAAQSILITDDAAFAERVVRAVEAQLATLATGEDAAASWRDHGAIVMAPLDEAPGLVDFI APEHVEFAVEAPERLADRVRHAGAIFLGRHAPEAVGDYVAGSNHVLPTSRAARFSSGLSLFDFLKRTSFVKCDPAAFAAL APATIALAEAEGLPAHARSASIRLEPPGG >Mature_429_residues MRRFAFTDPGFQEAFAAFVAERRDTPEDVDAVVRDVLAAVRSEGLDALLRFTRDFDRVDVTEETIRVSAAEIAEGAAACP AEVREAIAFAAARIRAYHERQRPADQRFTDEAGVELGWRWTPLDAVGIYVPGGRAAYPSTVLMNAVPAAAAGVGRIAMVT PPGRLQPAVLAAAQAAGVTEIWRVGGAQAVAALAYGAGPIRPVDKIVGPGNAFVTAAKRRVYGVVGIDALAGPSEIVVVA DGANDPDWIAADLLSQAEHDPAAQSILITDDAAFAERVVRAVEAQLATLATGEDAAASWRDHGAIVMAPLDEAPGLVDFI APEHVEFAVEAPERLADRVRHAGAIFLGRHAPEAVGDYVAGSNHVLPTSRAARFSSGLSLFDFLKRTSFVKCDPAAFAAL APATIALAEAEGLPAHARSASIRLEPPGG
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=402, Percent_Identity=40.547263681592, Blast_Score=274, Evalue=7e-75, Organism=Saccharomyces cerevisiae, GI6319819, Length=410, Percent_Identity=34.8780487804878, Blast_Score=226, Evalue=6e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 44970; Mature: 44970
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFAFTDPGFQEAFAAFVAERRDTPEDVDAVVRDVLAAVRSEGLDALLRFTRDFDRVDV CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC TEETIRVSAAEIAEGAAACPAEVREAIAFAAARIRAYHERQRPADQRFTDEAGVELGWRW CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEECEEE TPLDAVGIYVPGGRAAYPSTVLMNAVPAAAAGVGRIAMVTPPGRLQPAVLAAAQAAGVTE CCCCEEEEEECCCCCCCCHHHHHHCCCHHHHCCCEEEEECCCCCCCHHHHHHHHHCCHHH IWRVGGAQAVAALAYGAGPIRPVDKIVGPGNAFVTAAKRRVYGVVGIDALAGPSEIVVVA HHHCCCHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHEEEEEEECCCCCCCEEEEEE DGANDPDWIAADLLSQAEHDPAAQSILITDDAAFAERVVRAVEAQLATLATGEDAAASWR CCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHC DHGAIVMAPLDEAPGLVDFIAPEHVEFAVEAPERLADRVRHAGAIFLGRHAPEAVGDYVA CCCCEEEEECCCCCCCEECCCCCCCEEECCCHHHHHHHHHHCCEEEEECCCCHHHHHHHC GSNHVLPTSRAARFSSGLSLFDFLKRTSFVKCDPAAFAALAPATIALAEAEGLPAHARSA CCCCCCCCHHHHHHHCCCHHHHHHHHCCCEEECHHHHHHHHHHHEEEECCCCCCCCCCCC SIRLEPPGG EEEECCCCC >Mature Secondary Structure MRRFAFTDPGFQEAFAAFVAERRDTPEDVDAVVRDVLAAVRSEGLDALLRFTRDFDRVDV CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC TEETIRVSAAEIAEGAAACPAEVREAIAFAAARIRAYHERQRPADQRFTDEAGVELGWRW CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEECEEE TPLDAVGIYVPGGRAAYPSTVLMNAVPAAAAGVGRIAMVTPPGRLQPAVLAAAQAAGVTE CCCCEEEEEECCCCCCCCHHHHHHCCCHHHHCCCEEEEECCCCCCCHHHHHHHHHCCHHH IWRVGGAQAVAALAYGAGPIRPVDKIVGPGNAFVTAAKRRVYGVVGIDALAGPSEIVVVA HHHCCCHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHEEEEEEECCCCCCCEEEEEE DGANDPDWIAADLLSQAEHDPAAQSILITDDAAFAERVVRAVEAQLATLATGEDAAASWR CCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHC DHGAIVMAPLDEAPGLVDFIAPEHVEFAVEAPERLADRVRHAGAIFLGRHAPEAVGDYVA CCCCEEEEECCCCCCCEECCCCCCCEEECCCHHHHHHHHHHCCEEEEECCCCHHHHHHHC GSNHVLPTSRAARFSSGLSLFDFLKRTSFVKCDPAAFAALAPATIALAEAEGLPAHARSA CCCCCCCCHHHHHHHCCCHHHHHHHHCCCEEECHHHHHHHHHHHEEEECCCCCCCCCCCC SIRLEPPGG EEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]