| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105660
Identifier: 197105660
GI number: 197105660
Start: 2482481
End: 2482960
Strand: Reverse
Name: 197105660
Synonym: PHZ_c2197
Alternate gene names: NA
Gene position: 2482960-2482481 (Counterclockwise)
Preceding gene: 197105661
Following gene: 197105659
Centisome position: 62.13
GC content: 66.25
Gene sequence:
>480_bases ATGGCCGACGACGCGCGACAGAAACACCGATTGCAGAGTGTCGAGCTCGACGAGGAGTCGCTCGCTGCGGTCTCGCGCGA CCAGGAGCAGGAGCGCCAGATCGCGATCTTCGACCTACTGGAGGACAACTACTTCGCGCCCGAGGGCGCGGAGCACGGTC CGTACGACCTGCGCATGGGGCTGGTGGAGAACCGGCTGGTGCTGGACGTCAGGGGCCCCGGCTACGAGCGGCGGCACATC CTGTCGCTGTCGCCGTTCCGCGGGCTGATCCGCGACTACTTCATGATCTGCGAGAGCTACTACCAGGCGATCCGCAACTC TACGCCCGCGCAGATCGAGGCCTTGGACATGGGCCGGCGGGGTCTCCACAACGAGGCCTCGGAACTGCTGCAGACCCGGC TCAAGGGCAAGATCGAGACCGATCTCGACACGGCGCGGCGGCTGTTCACGCTGATCTGCGCGCTGCATTGGCGGGGTTGA
Upstream 100 bases:
>100_bases GGGCGTTTTTTCGTATCTGGCCTTTACCCTCGCAGGTGCGGGATGACGGCGCCCCCTCGTTTGCAATAAAGCTCGACGCG CATCCTCCGCCCCGGACGAC
Downstream 100 bases:
>100_bases CCGGCCCGATGACGTCCGATCCGGAGGCGCGGCTGCCCGATGCGGTCCTCTTCGCCTGCAATCTCAATCGGGTCCGTTCG CCCATGGCCGAGGCGCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MADDARQKHRLQSVELDEESLAAVSRDQEQERQIAIFDLLEDNYFAPEGAEHGPYDLRMGLVENRLVLDVRGPGYERRHI LSLSPFRGLIRDYFMICESYYQAIRNSTPAQIEALDMGRRGLHNEASELLQTRLKGKIETDLDTARRLFTLICALHWRG
Sequences:
>Translated_159_residues MADDARQKHRLQSVELDEESLAAVSRDQEQERQIAIFDLLEDNYFAPEGAEHGPYDLRMGLVENRLVLDVRGPGYERRHI LSLSPFRGLIRDYFMICESYYQAIRNSTPAQIEALDMGRRGLHNEASELLQTRLKGKIETDLDTARRLFTLICALHWRG >Mature_158_residues ADDARQKHRLQSVELDEESLAAVSRDQEQERQIAIFDLLEDNYFAPEGAEHGPYDLRMGLVENRLVLDVRGPGYERRHIL SLSPFRGLIRDYFMICESYYQAIRNSTPAQIEALDMGRRGLHNEASELLQTRLKGKIETDLDTARRLFTLICALHWRG
Specific function: Unknown
COG id: COG5328
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0262 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2197_PHEZH (B4RET2)
Other databases:
- EMBL: CP000747 - RefSeq: YP_002131037.1 - GeneID: 6791717 - GenomeReviews: CP000747_GR - KEGG: pzu:PHZ_c2197 - HOGENOM: HBG294171 - OMA: IDMARRG - ProtClustDB: PRK02853 - HAMAP: MF_00678 - InterPro: IPR008321 - PIRSF: PIRSF032146
Pfam domain/function: PF06793 UPF0262
EC number: NA
Molecular weight: Translated: 18404; Mature: 18273
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDARQKHRLQSVELDEESLAAVSRDQEQERQIAIFDLLEDNYFAPEGAEHGPYDLRMG CCCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH LVENRLVLDVRGPGYERRHILSLSPFRGLIRDYFMICESYYQAIRNSTPAQIEALDMGRR HHCCEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCC GLHNEASELLQTRLKGKIETDLDTARRLFTLICALHWRG CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ADDARQKHRLQSVELDEESLAAVSRDQEQERQIAIFDLLEDNYFAPEGAEHGPYDLRMG CCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH LVENRLVLDVRGPGYERRHILSLSPFRGLIRDYFMICESYYQAIRNSTPAQIEALDMGRR HHCCEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCC GLHNEASELLQTRLKGKIETDLDTARRLFTLICALHWRG CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA