| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105653
Identifier: 197105653
GI number: 197105653
Start: 2477183
End: 2477893
Strand: Reverse
Name: 197105653
Synonym: PHZ_c2190
Alternate gene names: NA
Gene position: 2477893-2477183 (Counterclockwise)
Preceding gene: 197105654
Following gene: 197105651
Centisome position: 62.01
GC content: 71.73
Gene sequence:
>711_bases ATGGCTGAGACATCACCGAACGAAGCCGTCCACGTCCGGCACAACCCGTTCGACGACCCCAAGCCCAAGCGCAGCAAGGG CATCACGGTCGCCATCGCGTTGTCGATCGCGGTTCACGCGGCGCTCGGCGTCTACCTCTGGAAGACGCGCTTCGAGCCCA AGTACAAGGAGTACTCGGACGAGGTGACGGACGTGGCTATCATCAAGCCCGTTCCGCCGCCGCCGCCGCCGCCTCCGCCG CCGCCGCCGCCGAACACGCCGCCGCCGCCGCCGCCGAAGCTGCAGCCCAGGCCGCCGGTCGCGGTGCCGGACGTCCCGAG CATCCCGCCTCTGCCGGTTCCGCCGGTCGAGCGCCGGATCGAGACGCCCGAGCCTCCGCGCGCTCCGCCGCCCGAGCCGC CGCGTCCGTCGGTGATCACCAATCCCGACTGGCAGCGTCGTCCCTCTGGCGAGGACCTGGCCCGGTACTATCCGGACCGG GCCATGCGGATGGAGGTTGAAGGCAGCGCCACCATCAGCTGCCGGGTCACGGCCCGCGGCACGCTGGAGGGCTGCTCGGT CACCGCGGAGTCCCCGGCCGACATGGGCTTCGGCGACGCCGCGATGCGCATGAGCCGCCTCTTCAAGATGCGGCCGCAGA CCAAGGACGGCCAGCCCGTCGACGGGGGCACGGTGCGGATCCCGATCCGCTTCACCCTCCCGAGAGGCTGA
Upstream 100 bases:
>100_bases GACGTGATGTACGGTGACTTCATGGGCGTGATGAACATGCTGCAGGACAACGGGTTCTACAGCGTGGCTCTCGTCGGTGA AGAGCAGTAGGTGGTGAAGC
Downstream 100 bases:
>100_bases GGCTGACCCCTCGAATGAAGAGCCCCGGTCGCGAAAGCGGCCGGGGCTTTTTCTTTGTCCGCTATTCCGCGGCCGCCGGG GCGGTTCGTGGCGCGCGGGG
Product: TonB protein
Products: NA
Alternate protein names: NB Protein; NB Family C-Terminal Domain Protein; NB1 Protein; Transcriptional Regulator
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MAETSPNEAVHVRHNPFDDPKPKRSKGITVAIALSIAVHAALGVYLWKTRFEPKYKEYSDEVTDVAIIKPVPPPPPPPPP PPPPNTPPPPPPKLQPRPPVAVPDVPSIPPLPVPPVERRIETPEPPRAPPPEPPRPSVITNPDWQRRPSGEDLARYYPDR AMRMEVEGSATISCRVTARGTLEGCSVTAESPADMGFGDAAMRMSRLFKMRPQTKDGQPVDGGTVRIPIRFTLPRG
Sequences:
>Translated_236_residues MAETSPNEAVHVRHNPFDDPKPKRSKGITVAIALSIAVHAALGVYLWKTRFEPKYKEYSDEVTDVAIIKPVPPPPPPPPP PPPPNTPPPPPPKLQPRPPVAVPDVPSIPPLPVPPVERRIETPEPPRAPPPEPPRPSVITNPDWQRRPSGEDLARYYPDR AMRMEVEGSATISCRVTARGTLEGCSVTAESPADMGFGDAAMRMSRLFKMRPQTKDGQPVDGGTVRIPIRFTLPRG >Mature_235_residues AETSPNEAVHVRHNPFDDPKPKRSKGITVAIALSIAVHAALGVYLWKTRFEPKYKEYSDEVTDVAIIKPVPPPPPPPPPP PPPNTPPPPPPKLQPRPPVAVPDVPSIPPLPVPPVERRIETPEPPRAPPPEPPRPSVITNPDWQRRPSGEDLARYYPDRA MRMEVEGSATISCRVTARGTLEGCSVTAESPADMGFGDAAMRMSRLFKMRPQTKDGQPVDGGTVRIPIRFTLPRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25819; Mature: 25688
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETSPNEAVHVRHNPFDDPKPKRSKGITVAIALSIAVHAALGVYLWKTRFEPKYKEYSD CCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHCC EVTDVAIIKPVPPPPPPPPPPPPPNTPPPPPPKLQPRPPVAVPDVPSIPPLPVPPVERRI CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC ETPEPPRAPPPEPPRPSVITNPDWQRRPSGEDLARYYPDRAMRMEVEGSATISCRVTARG CCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHCCCCEEEEEECCCEEEEEEEEECC TLEGCSVTAESPADMGFGDAAMRMSRLFKMRPQTKDGQPVDGGTVRIPIRFTLPRG CCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCC >Mature Secondary Structure AETSPNEAVHVRHNPFDDPKPKRSKGITVAIALSIAVHAALGVYLWKTRFEPKYKEYSD CCCCCCCEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHCC EVTDVAIIKPVPPPPPPPPPPPPPNTPPPPPPKLQPRPPVAVPDVPSIPPLPVPPVERRI CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC ETPEPPRAPPPEPPRPSVITNPDWQRRPSGEDLARYYPDRAMRMEVEGSATISCRVTARG CCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHCCCCEEEEEECCCEEEEEEEEECC TLEGCSVTAESPADMGFGDAAMRMSRLFKMRPQTKDGQPVDGGTVRIPIRFTLPRG CCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA