| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105641
Identifier: 197105641
GI number: 197105641
Start: 2459025
End: 2459948
Strand: Direct
Name: 197105641
Synonym: PHZ_c2178
Alternate gene names: NA
Gene position: 2459025-2459948 (Clockwise)
Preceding gene: 197105637
Following gene: 197105643
Centisome position: 61.53
GC content: 80.95
Gene sequence:
>924_bases ATGTCCGCATCCCCCGGCGGCCGTCCCGCCACGCTGCACGCCATAGTCGCCGCCCTCGGCGGCGACCTCTACGCCGGCGG GCGACGGGCCAATGTGCCCGCGCCCGGGCACAGCCGCGCCGACCGCTCCGTCTCCCTGCTGCTGGACGGCGACCGGCTGG TGGCCCACAGCTTCGGCGGCGCCACCTGGCGCGAGGCGCTGGACGACCTGCGCGCCCGCGGCCTGATCGACGCGGAGCAC CGGCTGCTGGACGGCGGGGCGGCCCCCGCGCCCGGCCCGGCGCCGGCCGCGCCCGACCGATCCGCCCGGACAGCGGCGGC GGCCCGGCTGTGGGCCGAGGCGGGGCCGCTGCGGCCCGGGACGGCGGCCGCCCTGCACTGCCGGCGGCGCGGGGCGCCCC AGGCCGCGGAGTCCCCGGCCCTGCGGGCGCATGCGGCCGCCCCGACCTCCCTCTACCGGCCGGGCTTCCGGCGCGCCCCC GCCCTGGTCGCCGCGGTGCGCGCGCCGGACGGGCCGCTCACCGCCGTGGAGGTCACCTACCTGACCGACGACGGCCGCCG GCGGCGGATGACGGCGGCGCGGCGGGTGGCGGGCGTCCTGCCGCCGGGCGCCGCCGTGCGGCTGGCCGATCCCGGCGCCG AGATGCTCGCCGCCGAGGGGGTGTTCACCGCCCTGTCGGCGATGCGGGTCTTCGGGCTGCCGGGCTGGGCTCTGCTCGGC GCGCACAACCTGGCGCGCTGGACGCCGCCGGACGGCGTCCGGCGGGTGCTCATCGCCGCCGACAACGGACGCATCGGCCT GGCGACGGCCGACCGCCTGCAGCGCCGGCTCCGGGAGATGGGGCTGCAGGCGCAGGTGCGCCCCCCGCCCGCGCCCTTCG GCGACTGGAACGATCTTCACGGCGCCAAGGCCGAGGCGGGCTGA
Upstream 100 bases:
>100_bases CTGCGCCTGGTGCGCGAGCCGGCCAGCGGACGGGGCGGCTGAAGGCCCGAGGAAGGGCGGCGGACGGCCCCTTGAGGACC GGAGGCGAAGGAGACCGACC
Downstream 100 bases:
>100_bases GGCGGTCGGACGCGGCGCTTGCGCCGACGGGCGACTCGCCTCCCGAGTCGCGGCGGAAAGGGAAGTCCCGTGATCGAACC CGCGCCCAGGCTGAAGACGC
Product: conserved hypothetical genomic island protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSASPGGRPATLHAIVAALGGDLYAGGRRANVPAPGHSRADRSVSLLLDGDRLVAHSFGGATWREALDDLRARGLIDAEH RLLDGGAAPAPGPAPAAPDRSARTAAAARLWAEAGPLRPGTAAALHCRRRGAPQAAESPALRAHAAAPTSLYRPGFRRAP ALVAAVRAPDGPLTAVEVTYLTDDGRRRRMTAARRVAGVLPPGAAVRLADPGAEMLAAEGVFTALSAMRVFGLPGWALLG AHNLARWTPPDGVRRVLIAADNGRIGLATADRLQRRLREMGLQAQVRPPPAPFGDWNDLHGAKAEAG
Sequences:
>Translated_307_residues MSASPGGRPATLHAIVAALGGDLYAGGRRANVPAPGHSRADRSVSLLLDGDRLVAHSFGGATWREALDDLRARGLIDAEH RLLDGGAAPAPGPAPAAPDRSARTAAAARLWAEAGPLRPGTAAALHCRRRGAPQAAESPALRAHAAAPTSLYRPGFRRAP ALVAAVRAPDGPLTAVEVTYLTDDGRRRRMTAARRVAGVLPPGAAVRLADPGAEMLAAEGVFTALSAMRVFGLPGWALLG AHNLARWTPPDGVRRVLIAADNGRIGLATADRLQRRLREMGLQAQVRPPPAPFGDWNDLHGAKAEAG >Mature_306_residues SASPGGRPATLHAIVAALGGDLYAGGRRANVPAPGHSRADRSVSLLLDGDRLVAHSFGGATWREALDDLRARGLIDAEHR LLDGGAAPAPGPAPAAPDRSARTAAAARLWAEAGPLRPGTAAALHCRRRGAPQAAESPALRAHAAAPTSLYRPGFRRAPA LVAAVRAPDGPLTAVEVTYLTDDGRRRRMTAARRVAGVLPPGAAVRLADPGAEMLAAEGVFTALSAMRVFGLPGWALLGA HNLARWTPPDGVRRVLIAADNGRIGLATADRLQRRLREMGLQAQVRPPPAPFGDWNDLHGAKAEAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31845; Mature: 31713
Theoretical pI: Translated: 11.85; Mature: 11.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASPGGRPATLHAIVAALGGDLYAGGRRANVPAPGHSRADRSVSLLLDGDRLVAHSFGG CCCCCCCCCHHHHHHHHHHCCCEECCCEECCCCCCCCCCCCCEEEEEECCCEEEEECCCC ATWREALDDLRARGLIDAEHRLLDGGAAPAPGPAPAAPDRSARTAAAARLWAEAGPLRPG HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC TAAALHCRRRGAPQAAESPALRAHAAAPTSLYRPGFRRAPALVAAVRAPDGPLTAVEVTY HHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHCCCCHHCCHHEEEEECCCCCEEEEEEEE LTDDGRRRRMTAARRVAGVLPPGAAVRLADPGAEMLAAEGVFTALSAMRVFGLPGWALLG ECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHC AHNLARWTPPDGVRRVLIAADNGRIGLATADRLQRRLREMGLQAQVRPPPAPFGDWNDLH CCCCCCCCCCHHHEEEEEEECCCCEEEHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCC GAKAEAG CCCCCCC >Mature Secondary Structure SASPGGRPATLHAIVAALGGDLYAGGRRANVPAPGHSRADRSVSLLLDGDRLVAHSFGG CCCCCCCCHHHHHHHHHHCCCEECCCEECCCCCCCCCCCCCEEEEEECCCEEEEECCCC ATWREALDDLRARGLIDAEHRLLDGGAAPAPGPAPAAPDRSARTAAAARLWAEAGPLRPG HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC TAAALHCRRRGAPQAAESPALRAHAAAPTSLYRPGFRRAPALVAAVRAPDGPLTAVEVTY HHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHCCCCHHCCHHEEEEECCCCCEEEEEEEE LTDDGRRRRMTAARRVAGVLPPGAAVRLADPGAEMLAAEGVFTALSAMRVFGLPGWALLG ECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHC AHNLARWTPPDGVRRVLIAADNGRIGLATADRLQRRLREMGLQAQVRPPPAPFGDWNDLH CCCCCCCCCCHHHEEEEEEECCCCEEEHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCC GAKAEAG CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA