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The map label for this gene is yubM [H]

Identifier: 197105643

GI number: 197105643

Start: 2460692

End: 2462878

Strand: Direct

Name: yubM [H]

Synonym: PHZ_c2180

Alternate gene names: 197105643

Gene position: 2460692-2462878 (Clockwise)

Preceding gene: 197105641

Following gene: 197105644

Centisome position: 61.57

GC content: 78.74

Gene sequence:

>2187_bases
GTGGACAATGCATATACGCATTGTGTTGACATCGCCGATACGACCCGAGGATCGCCGCGAGGTTGCGTCGCCCCGCGCCG
GCCCGGCGATCGGCGGGCGGAGGGGGAGGCAGGGCGGGGTCGGGCGCCCGGCCCGGGGGTGGTCCCCGACGGCCGGGCGG
AGAGCCCATCCATGTCCGATCCTGCGATTGCGGCGCCCGAGGCGCGCCTGCCCGTCACCTTCCCGCTCCGCGACCTGGCC
GTCGCGCCCGAGAACCTGCGCTTCGGCGAGCCGCCGGACGAGGGGATCCCGCAGCTGGCGGAGGCCCTCCTGGCGGCCGG
CCTGCTGCAGCCCCTCACCGTGCGGCCCGGCCGCCGCCGGGAGAAGCCGGCCATGGTGCTCGACGGCCGGCGCCGCTGGC
TGGCCCTGACCTCGCTGCGGGAGGCCGGGCGCATCGCCGCCGACCATCCGGTGAGCGCTTTCCTCGAGACCGACCCCGCC
CGGCAGGCCGCCGCCCTGGTGCTGACCAACACCGGGGTGCCGGCCCACATCGCCGACGTGATCGCCGCCATCGGCCGCAT
GCTGAAGGCCAGGCTCACCGTGGCGGCGATCGCCGGGGCGCTCGGCTACGCCGAGCTCGAGGTGCGGCGGCTGGCGGCGC
TCGCCGACCTCCATCCCAAGGCGCTCGAGGCGCTGAAGGCCGGCCGCCTCACCCTGCGCCAGGCGCGGCTGCTGGCGCGG
CTGCCCGACCGGCGCGAGCAGGGCGAGCTCGCCGGCCAGGCCCTCGCCGGCCACGGCTTCCCGGAATGGCGGATCACCGA
ACGGCTCGACCGCGAGCGGCTCACCGCCGCGGACCGGCGCTTCCGGCTGGTGGGGCCCGGCGGGTACGCGGCCGCCGGCG
GGCGCACCGAGAGCGACCTGTTCGGCGAGCGCCCGGACGTGCTGCTCGATCCCGAGGCGCTGGAGGCCGCCTGGACCGCC
CGCGCCGAGGCGCTGGCGGACGTCCTGGCGGCGCCGGGTCGGGAGGTTCGGATCGCCTCGGCGATCCCGGACCCGGACGC
CGCCCTGGAGCCGTTCGGGCACGCCTGGGGCGACGGCCTGGACGCCGCGGCGCTCGACGTCTGGCGGGCCGCGGAGGCCG
CGGCGGACGAGGCGCGCGCGGCGCTCGCCGACCTCGACCTCTCGGACGGCGCCAGCGACCCGCTCATCCGGACCTATCTG
GACGCCCGGCTGACCGCCCTGGTCGCCGGCGAGCCGCCGCGGCCGGTCAGCCTCGTGCAGGTCTTCGCCAGCGGCCGCAC
CGGGCTCGAGCTGTCCGCCTATGGGCCGCCCGGCGAGGCGCCGGAGTCGGCCGTCGAGGCCGGCGCGGCGCTGGACGACG
AACAGGGGGACGCGGGCGCGGCGGCCCATCGGCCCGCCTCGTCGGCCCCGGTCCGGTGCGTGGCGCCGGCGCCGCCCCCG
GAGCTCGAGGGCGTCAACCACGCCCTGCACGAGGTCCGCACCGACACCGCCACGCGGGCGCTGATCCGGGCGCTGGCAGA
CGATCCGGGGAGCGCGGTCGTGGCGCTGACGGCGCGGCTCTTCTCGGTGATGGTGCTGCGGCAGGGGCTCGGCCGCGGGG
GCGGGGCGCTGACGCTGCAGGCGGAGGCCTACGGCCGCCCGGGGGCCTCGCCGATCGGCCCTCTGGACGGCGAGGTGCGC
CGGCGGCTGGCCGAGCGGCGGGCCGCCTGGGAGGCCTCGGGCCTGTCGCCGATCGCCTGGGCGGCGGGCCTGCCGCACGG
CGAGCGGATGGCGATGCTTGCGGAGCTGACGGCGCTCGGCCTCGACCTGCGCGAGGCGCGCACCAGCCAGGTCCGGACCG
CCGCGCGGGCGGAGGCGGCGGAGATCGCCGCCCTGTGCGGCGCCGACGTCGCCCTGCACTGGACGCCGGACGAGGCCTTC
CTCGCGGCGCACCCCAAGAGCCGGCTGCTGGCCATGCTCGATGAGATGGGCGCGTCGGACAGTCGCGCCGGCGGCTGCCG
CAAGGACGAGCTCGTCGCCCTGGTGGCGGAGCGGGCCGCGGAGCGAGGCTGGGCCCCCGCCTATCTCTCCTGGGCCGCCG
CGCTGCCGGACGCGCCGGAGCCCGCGGAGAGCGAGGCCGAGGCGGCGGACGCGGCCGGCGCCGACGGCGTCCCGACGCCG
CCGGACGGGGCGGCGATCGCCGCCTGA

Upstream 100 bases:

>100_bases
ATGAGGTCGGGACGTCGGGCCGCGGCGGGGATGCTGATGGACATGCCGCGGGTGGCGTCCGGACGGTCCAGCGCACCTGT
CGCCATGACGATCCTCCTGT

Downstream 100 bases:

>100_bases
CCGGACCGCCCGACGGCGCCGCCCGTCGCGAACGCCGGGGAGCCCCGCGGCCTGGAGCGGCCGCGGCCCCGGGGTGGGCA
CGTCTAGGAGCGCTCCGCGG

Product: predicted transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 728; Mature: 728

Protein sequence:

>728_residues
MDNAYTHCVDIADTTRGSPRGCVAPRRPGDRRAEGEAGRGRAPGPGVVPDGRAESPSMSDPAIAAPEARLPVTFPLRDLA
VAPENLRFGEPPDEGIPQLAEALLAAGLLQPLTVRPGRRREKPAMVLDGRRRWLALTSLREAGRIAADHPVSAFLETDPA
RQAAALVLTNTGVPAHIADVIAAIGRMLKARLTVAAIAGALGYAELEVRRLAALADLHPKALEALKAGRLTLRQARLLAR
LPDRREQGELAGQALAGHGFPEWRITERLDRERLTAADRRFRLVGPGGYAAAGGRTESDLFGERPDVLLDPEALEAAWTA
RAEALADVLAAPGREVRIASAIPDPDAALEPFGHAWGDGLDAAALDVWRAAEAAADEARAALADLDLSDGASDPLIRTYL
DARLTALVAGEPPRPVSLVQVFASGRTGLELSAYGPPGEAPESAVEAGAALDDEQGDAGAAAHRPASSAPVRCVAPAPPP
ELEGVNHALHEVRTDTATRALIRALADDPGSAVVALTARLFSVMVLRQGLGRGGGALTLQAEAYGRPGASPIGPLDGEVR
RRLAERRAAWEASGLSPIAWAAGLPHGERMAMLAELTALGLDLREARTSQVRTAARAEAAEIAALCGADVALHWTPDEAF
LAAHPKSRLLAMLDEMGASDSRAGGCRKDELVALVAERAAERGWAPAYLSWAAALPDAPEPAESEAEAADAAGADGVPTP
PDGAAIAA

Sequences:

>Translated_728_residues
MDNAYTHCVDIADTTRGSPRGCVAPRRPGDRRAEGEAGRGRAPGPGVVPDGRAESPSMSDPAIAAPEARLPVTFPLRDLA
VAPENLRFGEPPDEGIPQLAEALLAAGLLQPLTVRPGRRREKPAMVLDGRRRWLALTSLREAGRIAADHPVSAFLETDPA
RQAAALVLTNTGVPAHIADVIAAIGRMLKARLTVAAIAGALGYAELEVRRLAALADLHPKALEALKAGRLTLRQARLLAR
LPDRREQGELAGQALAGHGFPEWRITERLDRERLTAADRRFRLVGPGGYAAAGGRTESDLFGERPDVLLDPEALEAAWTA
RAEALADVLAAPGREVRIASAIPDPDAALEPFGHAWGDGLDAAALDVWRAAEAAADEARAALADLDLSDGASDPLIRTYL
DARLTALVAGEPPRPVSLVQVFASGRTGLELSAYGPPGEAPESAVEAGAALDDEQGDAGAAAHRPASSAPVRCVAPAPPP
ELEGVNHALHEVRTDTATRALIRALADDPGSAVVALTARLFSVMVLRQGLGRGGGALTLQAEAYGRPGASPIGPLDGEVR
RRLAERRAAWEASGLSPIAWAAGLPHGERMAMLAELTALGLDLREARTSQVRTAARAEAAEIAALCGADVALHWTPDEAF
LAAHPKSRLLAMLDEMGASDSRAGGCRKDELVALVAERAAERGWAPAYLSWAAALPDAPEPAESEAEAADAAGADGVPTP
PDGAAIAA
>Mature_728_residues
MDNAYTHCVDIADTTRGSPRGCVAPRRPGDRRAEGEAGRGRAPGPGVVPDGRAESPSMSDPAIAAPEARLPVTFPLRDLA
VAPENLRFGEPPDEGIPQLAEALLAAGLLQPLTVRPGRRREKPAMVLDGRRRWLALTSLREAGRIAADHPVSAFLETDPA
RQAAALVLTNTGVPAHIADVIAAIGRMLKARLTVAAIAGALGYAELEVRRLAALADLHPKALEALKAGRLTLRQARLLAR
LPDRREQGELAGQALAGHGFPEWRITERLDRERLTAADRRFRLVGPGGYAAAGGRTESDLFGERPDVLLDPEALEAAWTA
RAEALADVLAAPGREVRIASAIPDPDAALEPFGHAWGDGLDAAALDVWRAAEAAADEARAALADLDLSDGASDPLIRTYL
DARLTALVAGEPPRPVSLVQVFASGRTGLELSAYGPPGEAPESAVEAGAALDDEQGDAGAAAHRPASSAPVRCVAPAPPP
ELEGVNHALHEVRTDTATRALIRALADDPGSAVVALTARLFSVMVLRQGLGRGGGALTLQAEAYGRPGASPIGPLDGEVR
RRLAERRAAWEASGLSPIAWAAGLPHGERMAMLAELTALGLDLREARTSQVRTAARAEAAEIAALCGADVALHWTPDEAF
LAAHPKSRLLAMLDEMGASDSRAGGCRKDELVALVAERAAERGWAPAYLSWAAALPDAPEPAESEAEAADAAGADGVPTP
PDGAAIAA

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 75801; Mature: 75801

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNAYTHCVDIADTTRGSPRGCVAPRRPGDRRAEGEAGRGRAPGPGVVPDGRAESPSMSD
CCCCCEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAIAAPEARLPVTFPLRDLAVAPENLRFGEPPDEGIPQLAEALLAAGLLQPLTVRPGRRR
CCCCCCCCCCCEEECHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
EKPAMVLDGRRRWLALTSLREAGRIAADHPVSAFLETDPARQAAALVLTNTGVPAHIADV
CCCCEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHEEEEEECCCCCHHHHHH
IAAIGRMLKARLTVAAIAGALGYAELEVRRLAALADLHPKALEALKAGRLTLRQARLLAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LPDRREQGELAGQALAGHGFPEWRITERLDRERLTAADRRFRLVGPGGYAAAGGRTESDL
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCHHH
FGERPDVLLDPEALEAAWTARAEALADVLAAPGREVRIASAIPDPDAALEPFGHAWGDGL
CCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCHHHCCCC
DAAALDVWRAAEAAADEARAALADLDLSDGASDPLIRTYLDARLTALVAGEPPRPVSLVQ
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCHHHHH
VFASGRTGLELSAYGPPGEAPESAVEAGAALDDEQGDAGAAAHRPASSAPVRCVAPAPPP
HHHCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
ELEGVNHALHEVRTDTATRALIRALADDPGSAVVALTARLFSVMVLRQGLGRGGGALTLQ
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
AEAYGRPGASPIGPLDGEVRRRLAERRAAWEASGLSPIAWAAGLPHGERMAMLAELTALG
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHC
LDLREARTSQVRTAARAEAAEIAALCGADVALHWTPDEAFLAAHPKSRLLAMLDEMGASD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCHHHHHHHHHHHCCCC
SRAGGCRKDELVALVAERAAERGWAPAYLSWAAALPDAPEPAESEAEAADAAGADGVPTP
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCC
PDGAAIAA
CCCCCCCC
>Mature Secondary Structure
MDNAYTHCVDIADTTRGSPRGCVAPRRPGDRRAEGEAGRGRAPGPGVVPDGRAESPSMSD
CCCCCEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAIAAPEARLPVTFPLRDLAVAPENLRFGEPPDEGIPQLAEALLAAGLLQPLTVRPGRRR
CCCCCCCCCCCEEECHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
EKPAMVLDGRRRWLALTSLREAGRIAADHPVSAFLETDPARQAAALVLTNTGVPAHIADV
CCCCEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHEEEEEECCCCCHHHHHH
IAAIGRMLKARLTVAAIAGALGYAELEVRRLAALADLHPKALEALKAGRLTLRQARLLAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LPDRREQGELAGQALAGHGFPEWRITERLDRERLTAADRRFRLVGPGGYAAAGGRTESDL
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCHHH
FGERPDVLLDPEALEAAWTARAEALADVLAAPGREVRIASAIPDPDAALEPFGHAWGDGL
CCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCHHHCCCC
DAAALDVWRAAEAAADEARAALADLDLSDGASDPLIRTYLDARLTALVAGEPPRPVSLVQ
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCHHHHH
VFASGRTGLELSAYGPPGEAPESAVEAGAALDDEQGDAGAAAHRPASSAPVRCVAPAPPP
HHHCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
ELEGVNHALHEVRTDTATRALIRALADDPGSAVVALTARLFSVMVLRQGLGRGGGALTLQ
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
AEAYGRPGASPIGPLDGEVRRRLAERRAAWEASGLSPIAWAAGLPHGERMAMLAELTALG
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHC
LDLREARTSQVRTAARAEAAEIAALCGADVALHWTPDEAFLAAHPKSRLLAMLDEMGASD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCHHHHHHHHHHHCCCC
SRAGGCRKDELVALVAERAAERGWAPAYLSWAAALPDAPEPAESEAEAADAAGADGVPTP
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCC
PDGAAIAA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]