| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105626
Identifier: 197105626
GI number: 197105626
Start: 2435684
End: 2437684
Strand: Direct
Name: 197105626
Synonym: PHZ_c2163
Alternate gene names: NA
Gene position: 2435684-2437684 (Clockwise)
Preceding gene: 197105621
Following gene: 197105628
Centisome position: 60.95
GC content: 74.06
Gene sequence:
>2001_bases GTGCCCCTTGTGCCCCGCGGTGTAGGTGAGGCCGGCGAGCTGGGCGTTGATCTCGCCCGCGTCGCCGACGAGCTGCAGGC CCTCCGCGGCCTCGTCCGCGTCGGCCGCGCCCGCGATCTCGCCGTGCTCGGCGACGAGGGTCACCGTCAACGGATCGTCG TCCGCGTCAGCGACCGTGAAGTCCGGCAGCGGCGAGGCCACCCCCCAGCGGACCGTCACGTCGTCCAATGTCAGGCCGTG CAGGGTCGGCGAGGCGTTGGGGGGCGCGCTGAGCCACAAGGTTCCCCAGGTCGGGAACAGCTGGCGGCCGTCTTCCAGGC TCATCTGAAGGAAGTCCAGCCCGCCCTGGTCCACCTTGACCGTGGCCGCGGCGAGTTGGGCGTTGATCTCCTCCGCCGTG CCGACGAGCTGGATCCCGTCGGCCTCCCCGTCCGCATCGGCGAGCCCGATCAGCTCGATCGCCCCGGGAATGATCGTCAG CACCAGGGAGTCCCCGTCCGCGTCCGAGACGGTGAAATCAGGCAGGTCCACCGCCCGCCCCGCCGCCACGGGCGCTGGGC TGTCGGCGTCGTTCAGCCCCGCGAAGGCCGGCGCGGCGTTGCCGCCCGTGGCGGTCATCATGATGACGCCCGAGGCCGAC AGGGCGCCGTCGCTCACGGCGATGTCGATCCAGGCCAGGTCGTCGCCGCGGTCGGCGGTGAAGGTCATGCCGGACAGCAG GGCGGTGAGTTCGGCTGCAGACCCGCTCAGCTGGATTCCGGCGACATCCGGGTCCGCGTCCGTCAGTCCGCCGATCACGC CGTTGTAGCTGGTCAAGGTCGCCAGCAGCGGATCGTCGTCGAGGTCCTCGACCACCGGGTCGAGCACCTCGATCTCGACG CCGGCCGGCGCCTCCGGCTGAGGGACGATCGGCACGAGGATGCTGGGGGCGCGGTTGCCGGCGGGCGGGTCGCCGCCCTC CCCGTCCCCGGAGCCCTCGCCGCCCGCGGAGACGTTGTACATCAGCGATCCGGCGGCGACGTCGATCCCGTCGGTGACCG AGATGTTGATCCAGGCGAACCCTTCCGCATCCGGCGTGAAGGTGAGCCCGGCGAGCTTGCTGTTGAGGTCCGCCGCCGTC CCCCTCAGCTGGACGCCCGCCATTGTCGGATCCTCGTCCGTCACCCCGCCGATGAGGCCGAAGCCGGGCGAAAGCGTCAC CTCCAGGAGGTCGCCGTCGGCGTCGCCCACGGTCAGGTCCGGGGCCTCCACCGTCGCGCCCGCCGCGGCCGTCGGCCAGG GCCAGGGCACGCCCTCGAGCGTGGGCGGGGTGTTGGCGGCGAGCAGGCCGGCATAGGCCTCGAGGGCGGGCGTCACGAAC GCCACCGCCGGGCTGCCGGCGTCGCCGTCAGAGGCGACGTCGAGGTTCCAGTCCCCGCCAAGCCCGGCGCCTCCGGTCGG CGTGGCCGACGCCGCGACCCGGGCGCCCATCGCCTGGGCCAGCGCCGCGACGAACGCCCGCCCCTCGGTCCCGGCCCCCG CCCGGCAGCCGTAGACCAGCACCTGGCCGGCGGGCCCCAGGGCCTGCCCGAAGGCGGCCAGGTCGCGGGACCGCGCCCCG AGCCCGGCCCGGTCCAGGCGCAGCGACCCCAGCGTCAGCGCTCCGGGTTCGCCATGGGAGACCAGGTGGATGGCCTCCAG GCCGCGGCGCGTGCGCAAGGCCTCGGCGATGCGGGACAGACCGTCGTCCGACTCAGGCAGGACCTGGACCTCCACGCCTT CGCGCAGGCCGGCGAGCAGCACCTCGATGTGCGGCACGTCGGACAGGATGAACAACAGTTCGGCGTCGTGGGCAGGCGCG CGAGCCGGCGCGGCGTGATGCGGCATGGTTCCCCCCGGAACGGACGATCAGGGCCCTCGCCGCTATCACGAGGCCGCGGC CGCGGGTCCGGGCGCGCGCCCCGAATTGGGGGATTTGGGCGCCGCGGCGCCCCAGAATGGGGGGCGCGCCCGCCTCGCTA G
Upstream 100 bases:
>100_bases GCGCGCCGGAGATGGACGGGGCTCCGTTGGCCTTGGCCCACAGATTGATCCAGGTGATGGTCTCGTCGCGGCCATCCGTG ACCTCGACCCGGATCAGCCC
Downstream 100 bases:
>100_bases CGGGTCGGCTCCAGGGCGGCGCTTCGCTCCGCCTCCCATTCGGCGAGCAGGCCCTGGGCGTCCAACGCGGCGAAGAACCG GCGCAGATTGGCAAGGTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 666; Mature: 665
Protein sequence:
>666_residues MPLVPRGVGEAGELGVDLARVADELQALRGLVRVGRARDLAVLGDEGHRQRIVVRVSDREVRQRRGHPPADRHVVQCQAV QGRRGVGGRAEPQGSPGREQLAAVFQAHLKEVQPALVHLDRGRGELGVDLLRRADELDPVGLPVRIGEPDQLDRPGNDRQ HQGVPVRVRDGEIRQVHRPPRRHGRWAVGVVQPREGRRGVAARGGHHDDARGRQGAVAHGDVDPGQVVAAVGGEGHAGQQ GGEFGCRPAQLDSGDIRVRVRQSADHAVVAGQGRQQRIVVEVLDHRVEHLDLDAGRRLRLRDDRHEDAGGAVAGGRVAAL PVPGALAARGDVVHQRSGGDVDPVGDRDVDPGEPFRIRREGEPGELAVEVRRRPPQLDARHCRILVRHPADEAEAGRKRH LQEVAVGVAHGQVRGLHRRARRGRRPGPGHALERGRGVGGEQAGIGLEGGRHERHRRAAGVAVRGDVEVPVPAKPGASGR RGRRRDPGAHRLGQRRDERPPLGPGPRPAAVDQHLAGGPQGLPEGGQVAGPRPEPGPVQAQRPQRQRSGFAMGDQVDGLQ AAARAQGLGDAGQTVVRLRQDLDLHAFAQAGEQHLDVRHVGQDEQQFGVVGRRASRRGVMRHGSPRNGRSGPSPLSRGRG RGSGRAPRIGGFGRRGAPEWGARPPR
Sequences:
>Translated_666_residues MPLVPRGVGEAGELGVDLARVADELQALRGLVRVGRARDLAVLGDEGHRQRIVVRVSDREVRQRRGHPPADRHVVQCQAV QGRRGVGGRAEPQGSPGREQLAAVFQAHLKEVQPALVHLDRGRGELGVDLLRRADELDPVGLPVRIGEPDQLDRPGNDRQ HQGVPVRVRDGEIRQVHRPPRRHGRWAVGVVQPREGRRGVAARGGHHDDARGRQGAVAHGDVDPGQVVAAVGGEGHAGQQ GGEFGCRPAQLDSGDIRVRVRQSADHAVVAGQGRQQRIVVEVLDHRVEHLDLDAGRRLRLRDDRHEDAGGAVAGGRVAAL PVPGALAARGDVVHQRSGGDVDPVGDRDVDPGEPFRIRREGEPGELAVEVRRRPPQLDARHCRILVRHPADEAEAGRKRH LQEVAVGVAHGQVRGLHRRARRGRRPGPGHALERGRGVGGEQAGIGLEGGRHERHRRAAGVAVRGDVEVPVPAKPGASGR RGRRRDPGAHRLGQRRDERPPLGPGPRPAAVDQHLAGGPQGLPEGGQVAGPRPEPGPVQAQRPQRQRSGFAMGDQVDGLQ AAARAQGLGDAGQTVVRLRQDLDLHAFAQAGEQHLDVRHVGQDEQQFGVVGRRASRRGVMRHGSPRNGRSGPSPLSRGRG RGSGRAPRIGGFGRRGAPEWGARPPR >Mature_665_residues PLVPRGVGEAGELGVDLARVADELQALRGLVRVGRARDLAVLGDEGHRQRIVVRVSDREVRQRRGHPPADRHVVQCQAVQ GRRGVGGRAEPQGSPGREQLAAVFQAHLKEVQPALVHLDRGRGELGVDLLRRADELDPVGLPVRIGEPDQLDRPGNDRQH QGVPVRVRDGEIRQVHRPPRRHGRWAVGVVQPREGRRGVAARGGHHDDARGRQGAVAHGDVDPGQVVAAVGGEGHAGQQG GEFGCRPAQLDSGDIRVRVRQSADHAVVAGQGRQQRIVVEVLDHRVEHLDLDAGRRLRLRDDRHEDAGGAVAGGRVAALP VPGALAARGDVVHQRSGGDVDPVGDRDVDPGEPFRIRREGEPGELAVEVRRRPPQLDARHCRILVRHPADEAEAGRKRHL QEVAVGVAHGQVRGLHRRARRGRRPGPGHALERGRGVGGEQAGIGLEGGRHERHRRAAGVAVRGDVEVPVPAKPGASGRR GRRRDPGAHRLGQRRDERPPLGPGPRPAAVDQHLAGGPQGLPEGGQVAGPRPEPGPVQAQRPQRQRSGFAMGDQVDGLQA AARAQGLGDAGQTVVRLRQDLDLHAFAQAGEQHLDVRHVGQDEQQFGVVGRRASRRGVMRHGSPRNGRSGPSPLSRGRGR GSGRAPRIGGFGRRGAPEWGARPPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71502; Mature: 71371
Theoretical pI: Translated: 11.98; Mature: 11.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVPRGVGEAGELGVDLARVADELQALRGLVRVGRARDLAVLGDEGHRQRIVVRVSDRE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCHH VRQRRGHPPADRHVVQCQAVQGRRGVGGRAEPQGSPGREQLAAVFQAHLKEVQPALVHLD HHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHEEEE RGRGELGVDLLRRADELDPVGLPVRIGEPDQLDRPGNDRQHQGVPVRVRDGEIRQVHRPP CCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCHHHHCCCH RRHGRWAVGVVQPREGRRGVAARGGHHDDARGRQGAVAHGDVDPGQVVAAVGGEGHAGQQ HHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCCCCC GGEFGCRPAQLDSGDIRVRVRQSADHAVVAGQGRQQRIVVEVLDHRVEHLDLDAGRRLRL CCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEE RDDRHEDAGGAVAGGRVAALPVPGALAARGDVVHQRSGGDVDPVGDRDVDPGEPFRIRRE CCCCCCCCCCEECCCEEEEECCCCHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEC GEPGELAVEVRRRPPQLDARHCRILVRHPADEAEAGRKRHLQEVAVGVAHGQVRGLHRRA CCCCCEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRGRRPGPGHALERGRGVGGEQAGIGLEGGRHERHRRAAGVAVRGDVEVPVPAKPGASGR HCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCEEEECCEECCCCCCCCCCCC RGRRRDPGAHRLGQRRDERPPLGPGPRPAAVDQHLAGGPQGLPEGGQVAGPRPEPGPVQA CCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC QRPQRQRSGFAMGDQVDGLQAAARAQGLGDAGQTVVRLRQDLDLHAFAQAGEQHLDVRHV CCCHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHCCHHHCCHHHC GQDEQQFGVVGRRASRRGVMRHGSPRNGRSGPSPLSRGRGRGSGRAPRIGGFGRRGAPEW CCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC GARPPR CCCCCC >Mature Secondary Structure PLVPRGVGEAGELGVDLARVADELQALRGLVRVGRARDLAVLGDEGHRQRIVVRVSDRE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCHH VRQRRGHPPADRHVVQCQAVQGRRGVGGRAEPQGSPGREQLAAVFQAHLKEVQPALVHLD HHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHEEEE RGRGELGVDLLRRADELDPVGLPVRIGEPDQLDRPGNDRQHQGVPVRVRDGEIRQVHRPP CCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCHHHHCCCH RRHGRWAVGVVQPREGRRGVAARGGHHDDARGRQGAVAHGDVDPGQVVAAVGGEGHAGQQ HHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCCCCC GGEFGCRPAQLDSGDIRVRVRQSADHAVVAGQGRQQRIVVEVLDHRVEHLDLDAGRRLRL CCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEE RDDRHEDAGGAVAGGRVAALPVPGALAARGDVVHQRSGGDVDPVGDRDVDPGEPFRIRRE CCCCCCCCCCEECCCEEEEECCCCHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEC GEPGELAVEVRRRPPQLDARHCRILVRHPADEAEAGRKRHLQEVAVGVAHGQVRGLHRRA CCCCCEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRGRRPGPGHALERGRGVGGEQAGIGLEGGRHERHRRAAGVAVRGDVEVPVPAKPGASGR HCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCEEEECCEECCCCCCCCCCCC RGRRRDPGAHRLGQRRDERPPLGPGPRPAAVDQHLAGGPQGLPEGGQVAGPRPEPGPVQA CCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC QRPQRQRSGFAMGDQVDGLQAAARAQGLGDAGQTVVRLRQDLDLHAFAQAGEQHLDVRHV CCCHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHCCHHHCCHHHC GQDEQQFGVVGRRASRRGVMRHGSPRNGRSGPSPLSRGRGRGSGRAPRIGGFGRRGAPEW CCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC GARPPR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA