Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197105619

Identifier: 197105619

GI number: 197105619

Start: 2427232

End: 2428191

Strand: Reverse

Name: 197105619

Synonym: PHZ_c2156

Alternate gene names: NA

Gene position: 2428191-2427232 (Counterclockwise)

Preceding gene: 197105620

Following gene: 197105618

Centisome position: 60.76

GC content: 72.5

Gene sequence:

>960_bases
ATGCCGTCCATGCCCCAACTCCATCGGCGAGGCTTCCTGGCGGCCGGAGCGGCCGCGGCGGGCCTGAGCATGGCGGGGGA
GGCGGCCGCCGCGGCCTTCTTCGCCCGCACCGGCCTGCCGATCGGCGTGCAGCTCTACACCTTCGGCCCGGAGGGCATGA
AGGACCTCGACGCGACCCTCGCGGCGGTCCGCGCCATCGGCTACCGCACGGTCGAGATCCCGGGCTTCATGGGCCGCACG
GCCGCCGAGCTGAAGGCGGCGCTGGACCGGGCGGGCCTGGCCTGCCCAAGCGCCCACATCCAGGCCCGCGGCGGCTTCGA
CGGCGACCTGGCCAAGCTGGCGGACGACCTCGCCACCCTCGGCGTCACCCAGGCGGTCATGCCCAGTCCCTACGTCCCCG
ACCACGCGCGGAAGGCGGCGGAGGGCGCGAGCGGCGCCGACGTCTACCGCCGGATGATGGGCGCCCTGACCGGCGACGAC
TGGAAGATGAACGCCGACTTCCTGAACGAGAAGGGCGCGGCGCTGAAGGCCTCCGGGATCACGGTCGGCTACCACAACCA
CAACTTCGAGTTCGCGCCGCAGGAAGGCGCAGGGCAGGGCGGCCCGACCGGCCTCGACATCCTGCTGGCGCGCACGGATC
CGGCGCTGGTCACCTTCCAGGCCGACGTCGGCTGGATGGCCGCGGCGGGTGTCGATCCCGCGGCCTATCTGCAGAAGCAC
AAGGGTCGTTTCACGCTCATGCACGTGAAGGACGTGAAGGCCTCGACCCGGCCGAACTTCGACCTGCGCATGGAGCCCAC
GGAAGTGGGCTCGGGGCGTCTCGACTGGAAGCGCCTGCTGCCGGCCGCGCACGCCGCCGGGGTGCGCGGCTTCTTCGTCG
AGCAGGAGCCGCCGTTCGAACGGCCCCGGCTCGAGGCCGCCCGGATCAGCCACGACTTCCTGGGAGGGCTCCAGGCATGA

Upstream 100 bases:

>100_bases
GCCGTGCTGCTGCTCGCGCTCTTCTTCCGCCCGCCGCAGAAGGGGCCCGCGGGTCCCGTCACGCCGTGACCGCTCCACCG
ACAAGCGAAGGAGGCGCTCC

Downstream 100 bases:

>100_bases
GCGTCCTGCGGCTGGCCATGGTCGGCGGCGGGCCGGGCGCTTTCATCGGCCCGGTGCACCGCATGGCCGCCGAGTTGGAC
GGCCGCATCCGCCTGGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Xylose Isomerase Domain-Containing Protein; Sugar Phosphate Isomerase/Epimerase; Twin-Arginine Translocation Pathway Signal; Xylose Isomerase DomaiN-Containing Protein Tim Barrel; Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase Family Protein; AP Endonuclease Family 2 Superfamily; Sugar Phosphate Isomerase / Epimerase; Sugar Phosphate Isomerases/Epimerases; Xlose Isomerase Domain-Containing Protein; Xylose Isomerase Domain-Containing Protein Tim Barrel

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MPSMPQLHRRGFLAAGAAAAGLSMAGEAAAAAFFARTGLPIGVQLYTFGPEGMKDLDATLAAVRAIGYRTVEIPGFMGRT
AAELKAALDRAGLACPSAHIQARGGFDGDLAKLADDLATLGVTQAVMPSPYVPDHARKAAEGASGADVYRRMMGALTGDD
WKMNADFLNEKGAALKASGITVGYHNHNFEFAPQEGAGQGGPTGLDILLARTDPALVTFQADVGWMAAAGVDPAAYLQKH
KGRFTLMHVKDVKASTRPNFDLRMEPTEVGSGRLDWKRLLPAAHAAGVRGFFVEQEPPFERPRLEAARISHDFLGGLQA

Sequences:

>Translated_319_residues
MPSMPQLHRRGFLAAGAAAAGLSMAGEAAAAAFFARTGLPIGVQLYTFGPEGMKDLDATLAAVRAIGYRTVEIPGFMGRT
AAELKAALDRAGLACPSAHIQARGGFDGDLAKLADDLATLGVTQAVMPSPYVPDHARKAAEGASGADVYRRMMGALTGDD
WKMNADFLNEKGAALKASGITVGYHNHNFEFAPQEGAGQGGPTGLDILLARTDPALVTFQADVGWMAAAGVDPAAYLQKH
KGRFTLMHVKDVKASTRPNFDLRMEPTEVGSGRLDWKRLLPAAHAAGVRGFFVEQEPPFERPRLEAARISHDFLGGLQA
>Mature_318_residues
PSMPQLHRRGFLAAGAAAAGLSMAGEAAAAAFFARTGLPIGVQLYTFGPEGMKDLDATLAAVRAIGYRTVEIPGFMGRTA
AELKAALDRAGLACPSAHIQARGGFDGDLAKLADDLATLGVTQAVMPSPYVPDHARKAAEGASGADVYRRMMGALTGDDW
KMNADFLNEKGAALKASGITVGYHNHNFEFAPQEGAGQGGPTGLDILLARTDPALVTFQADVGWMAAAGVDPAAYLQKHK
GRFTLMHVKDVKASTRPNFDLRMEPTEVGSGRLDWKRLLPAAHAAGVRGFFVEQEPPFERPRLEAARISHDFLGGLQA

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33683; Mature: 33552

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSMPQLHRRGFLAAGAAAAGLSMAGEAAAAAFFARTGLPIGVQLYTFGPEGMKDLDATL
CCCCCCHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHH
AAVRAIGYRTVEIPGFMGRTAAELKAALDRAGLACPSAHIQARGGFDGDLAKLADDLATL
HHHHHHCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHH
GVTQAVMPSPYVPDHARKAAEGASGADVYRRMMGALTGDDWKMNADFLNEKGAALKASGI
HHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCEECHHHHCCCCCEEEECCE
TVGYHNHNFEFAPQEGAGQGGPTGLDILLARTDPALVTFQADVGWMAAAGVDPAAYLQKH
EEEEECCCCEECCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCEEEECCCCHHHHHHHC
KGRFTLMHVKDVKASTRPNFDLRMEPTEVGSGRLDWKRLLPAAHAAGVRGFFVEQEPPFE
CCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHCCHHHHCCCCEEEECCCCCCC
RPRLEAARISHDFLGGLQA
CCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PSMPQLHRRGFLAAGAAAAGLSMAGEAAAAAFFARTGLPIGVQLYTFGPEGMKDLDATL
CCCCCHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHH
AAVRAIGYRTVEIPGFMGRTAAELKAALDRAGLACPSAHIQARGGFDGDLAKLADDLATL
HHHHHHCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHH
GVTQAVMPSPYVPDHARKAAEGASGADVYRRMMGALTGDDWKMNADFLNEKGAALKASGI
HHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCEECHHHHCCCCCEEEECCE
TVGYHNHNFEFAPQEGAGQGGPTGLDILLARTDPALVTFQADVGWMAAAGVDPAAYLQKH
EEEEECCCCEECCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCEEEECCCCHHHHHHHC
KGRFTLMHVKDVKASTRPNFDLRMEPTEVGSGRLDWKRLLPAAHAAGVRGFFVEQEPPFE
CCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHCCHHHHCCCCEEEECCCCCCC
RPRLEAARISHDFLGGLQA
CCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA