| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is yegT [H]
Identifier: 197105620
GI number: 197105620
Start: 2428223
End: 2429446
Strand: Reverse
Name: yegT [H]
Synonym: PHZ_c2157
Alternate gene names: 197105620
Gene position: 2429446-2428223 (Counterclockwise)
Preceding gene: 197105622
Following gene: 197105619
Centisome position: 60.79
GC content: 69.12
Gene sequence:
>1224_bases ATGGGCGTCAAGGCTCGGCTGTTTCTGATGATGGTGCTCCAGCTCGCCGTCTGGGGCGCCTGGGCGCCGAAGCTGTTCCC CTACATGGGCATGCTGGGCTTCGCGCCGTGGCAGCAGTCGCTGGTCGGCAGCTCGTGGGGCGTGGCCGCCCTGCTCGGGA TCTTCTTCTCCAACCAGTTCGCCGACCGCAACTTCGCCGCCGAGCGGTTCATGGCGGCGAGCCATCTGCTGAGCGGCCTG GCGCTGCTCTTCACCGCCTTCCAGGCGGAGTTCTGGCCCTTCTTCGCCGGCTACCTCGTCTACAGCCTGCTGTACGTGCC GACGCTGTCGGTCGCCAACTCGGTCGCCTTCGCCAACCTCGCCGAGCCGGCGCGGGACTTCGGCGCGATCCGCATGGGCG GCACGGTCGGTTGGATGCTGGTGAGCTGGCCTTTCGTGTTCCTGCTGGGCGCCGGGGCCGAGCCGCAGCAGGTGCGCTCG ATCTTCATCGTCGCCGCCGTCGTCTCGTTCGCACTGGCCGCCTACAGCCTCACCCTGCCGCACACGCCGCCCAAGCGCGG CGGCGAGGCCGCGGACCCGCTGGCCTGGCGCGAGGCCTTCCGACTGCTGCGCGTGCCCTTCGTAGCCGTGCTCTTCGTGG TGACCTTCGTCGATAGCGTCATCCACAACGGCTACTTCGTGATGGCGGACGCCTTCCTCACCCAGCGCGTGGGGATCGCC GGCAACCTCTCCATGGTGGTCCTCAGCCTCGGCCAGCTGGCCGAGATCGTCACCATGTTCATCCTGGGCGGCGTGCTGAT CCGGATCGGCTGGAAGGCGACGCTGATCGTCGGCGTCCTGGGCCATGCCGCGCGCTTCGCCGTCTTCGCCTTCTTCCCCG ACAGCGTGCCCGTGATCGTCGCGGTGCAGCTGCTGCACGGGATCTGCTACGCGTTCTTCTTCGCGACGGTCTACATCTTC GTGGACGCCGCCTTCCCGGAGGACGTGCGCTCCAGCGCCCAGGGGCTGTTCAACCTGCTGATCCTCGGCGTCGGCAGCGT GGTCGCGAGCTTCCTCTTCCCGCACCTCATGGGCCGCCTGACGACGGCGACGGCCGCCGGGCCGCAGGTGGACTACCAGA CGCTGTTCCTGGTCCCCACCGGCATGGCCCTCGTCGCCGTGCTGCTGCTCGCGCTCTTCTTCCGCCCGCCGCAGAAGGGG CCCGCGGGTCCCGTCACGCCGTGA
Upstream 100 bases:
>100_bases GGATCGTGGCCATAGCTTGCACCGCCGGCTTGAACGTGTAATCGATTACATCGCGCGAGCGGGGCCGCACAAGAGTTCTC GCCGCCGGGGGAGGCGAGGC
Downstream 100 bases:
>100_bases CCGCTCCACCGACAAGCGAAGGAGGCGCTCCATGCCGTCCATGCCCCAACTCCATCGGCGAGGCTTCCTGGCGGCCGGAG CGGCCGCGGCGGGCCTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MGVKARLFLMMVLQLAVWGAWAPKLFPYMGMLGFAPWQQSLVGSSWGVAALLGIFFSNQFADRNFAAERFMAASHLLSGL ALLFTAFQAEFWPFFAGYLVYSLLYVPTLSVANSVAFANLAEPARDFGAIRMGGTVGWMLVSWPFVFLLGAGAEPQQVRS IFIVAAVVSFALAAYSLTLPHTPPKRGGEAADPLAWREAFRLLRVPFVAVLFVVTFVDSVIHNGYFVMADAFLTQRVGIA GNLSMVVLSLGQLAEIVTMFILGGVLIRIGWKATLIVGVLGHAARFAVFAFFPDSVPVIVAVQLLHGICYAFFFATVYIF VDAAFPEDVRSSAQGLFNLLILGVGSVVASFLFPHLMGRLTTATAAGPQVDYQTLFLVPTGMALVAVLLLALFFRPPQKG PAGPVTP
Sequences:
>Translated_407_residues MGVKARLFLMMVLQLAVWGAWAPKLFPYMGMLGFAPWQQSLVGSSWGVAALLGIFFSNQFADRNFAAERFMAASHLLSGL ALLFTAFQAEFWPFFAGYLVYSLLYVPTLSVANSVAFANLAEPARDFGAIRMGGTVGWMLVSWPFVFLLGAGAEPQQVRS IFIVAAVVSFALAAYSLTLPHTPPKRGGEAADPLAWREAFRLLRVPFVAVLFVVTFVDSVIHNGYFVMADAFLTQRVGIA GNLSMVVLSLGQLAEIVTMFILGGVLIRIGWKATLIVGVLGHAARFAVFAFFPDSVPVIVAVQLLHGICYAFFFATVYIF VDAAFPEDVRSSAQGLFNLLILGVGSVVASFLFPHLMGRLTTATAAGPQVDYQTLFLVPTGMALVAVLLLALFFRPPQKG PAGPVTP >Mature_406_residues GVKARLFLMMVLQLAVWGAWAPKLFPYMGMLGFAPWQQSLVGSSWGVAALLGIFFSNQFADRNFAAERFMAASHLLSGLA LLFTAFQAEFWPFFAGYLVYSLLYVPTLSVANSVAFANLAEPARDFGAIRMGGTVGWMLVSWPFVFLLGAGAEPQQVRSI FIVAAVVSFALAAYSLTLPHTPPKRGGEAADPLAWREAFRLLRVPFVAVLFVVTFVDSVIHNGYFVMADAFLTQRVGIAG NLSMVVLSLGQLAEIVTMFILGGVLIRIGWKATLIVGVLGHAARFAVFAFFPDSVPVIVAVQLLHGICYAFFFATVYIFV DAAFPEDVRSSAQGLFNLLILGVGSVVASFLFPHLMGRLTTATAAGPQVDYQTLFLVPTGMALVAVLLLALFFRPPQKGP AGPVTP
Specific function: Could be involved in nucleoside transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788415, Length=410, Percent_Identity=30, Blast_Score=151, Evalue=7e-38, Organism=Escherichia coli, GI1788745, Length=434, Percent_Identity=27.6497695852535, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI87082192, Length=439, Percent_Identity=25.9681093394077, Blast_Score=99, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR004740 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43923; Mature: 43791
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVKARLFLMMVLQLAVWGAWAPKLFPYMGMLGFAPWQQSLVGSSWGVAALLGIFFSNQF CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHH ADRNFAAERFMAASHLLSGLALLFTAFQAEFWPFFAGYLVYSLLYVPTLSVANSVAFANL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEPARDFGAIRMGGTVGWMLVSWPFVFLLGAGAEPQQVRSIFIVAAVVSFALAAYSLTLP HHHHHHHCCEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEECC HTPPKRGGEAADPLAWREAFRLLRVPFVAVLFVVTFVDSVIHNGYFVMADAFLTQRVGIA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCC GNLSMVVLSLGQLAEIVTMFILGGVLIRIGWKATLIVGVLGHAARFAVFAFFPDSVPVIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHEECCCCCHHHH AVQLLHGICYAFFFATVYIFVDAAFPEDVRSSAQGLFNLLILGVGSVVASFLFPHLMGRL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTATAAGPQVDYQTLFLVPTGMALVAVLLLALFFRPPQKGPAGPVTP HHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure GVKARLFLMMVLQLAVWGAWAPKLFPYMGMLGFAPWQQSLVGSSWGVAALLGIFFSNQF CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHH ADRNFAAERFMAASHLLSGLALLFTAFQAEFWPFFAGYLVYSLLYVPTLSVANSVAFANL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEPARDFGAIRMGGTVGWMLVSWPFVFLLGAGAEPQQVRSIFIVAAVVSFALAAYSLTLP HHHHHHHCCEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEECC HTPPKRGGEAADPLAWREAFRLLRVPFVAVLFVVTFVDSVIHNGYFVMADAFLTQRVGIA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCC GNLSMVVLSLGQLAEIVTMFILGGVLIRIGWKATLIVGVLGHAARFAVFAFFPDSVPVIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHEECCCCCHHHH AVQLLHGICYAFFFATVYIFVDAAFPEDVRSSAQGLFNLLILGVGSVVASFLFPHLMGRL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTATAAGPQVDYQTLFLVPTGMALVAVLLLALFFRPPQKGPAGPVTP HHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]