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The map label for this gene is ycjS [C]

Identifier: 197105618

GI number: 197105618

Start: 2426108

End: 2427235

Strand: Reverse

Name: ycjS [C]

Synonym: PHZ_c2155

Alternate gene names: 197105618

Gene position: 2427235-2426108 (Counterclockwise)

Preceding gene: 197105619

Following gene: 197105617

Centisome position: 60.74

GC content: 73.76

Gene sequence:

>1128_bases
ATGAGCGTCCTGCGGCTGGCCATGGTCGGCGGCGGGCCGGGCGCTTTCATCGGCCCGGTGCACCGCATGGCCGCCGAGTT
GGACGGCCGCATCCGCCTGGTGGCCGGCGCCTTCAGCCGCGATCCGGACAAGAGCGCCGCCGCAGCGCAGGCTTGGGGTG
TGCGCGGCTATGCCGACTGGTCCGAGATGATCGCCGCCGAGGCGGGCCGCGAGGACGGCGCCCAGGCGGTGGCGGTGGTC
ACGCCGAACCACCTCCACCTGGCCGTCTCGCGGGTCGCGCTGCAGGCCGGGCTGCACGTCATCAGCGACAAGCCCGCGAC
CCGGACGCTGGCCGAGGCGCGGGAGCTGGCCGCCGCCGTCGCCGCCTCGGGGCGCCTCTACGGCCTGACCTACACCTACA
CGGGCTATCCGATGGTGCGCGAGGCGCGGGAGATCGTCCGCCGGGGAGATCTCGGGTCGGTCCGCAAGGTCGTCGTCGAG
TACGCGCAGGGCTGGCTGTCGCGGCCGCGCGAGCGCGAGGGCGCCAAGCAGGCCGAGTGGCGGACCGATCCCGCCCTGGC
CGGGGCGGGCTGCATCGGCGACATCGGAGTGCACGCCTTCAACCTCGCCGAATTCGTCTCTGGCCGGCGCGTGGAGCGTC
TGTGCGCCGACGTCGGCACGGTGGTCCCGGGACGGCGGCTGGACGACGACTGCAACGTGCTGCTGCGGTTCGGCGGCGGT
GCGCGGGGCGTGCTGATCGCCTCGCAGATCTCGGCCGGCGCCCGCAACGGCCTGAAGCTCCAGGTCTATGGCGAGAGCGG
CGGCCTGACCTGGTCGCACGAGCGGCCGTCCGAGCTCACGATCGACCGGCTGGAGGGCCCCAGCCAGACGCTGCACGCGG
CCTCCGTCTATCTGTCGGGGCCGGCGCAGGCGGCCTCGCGGATTCCCACGGGCCATCCCGAGGGCTTCATCGAGGCCTTC
GCCAACCTCTACCGCGACTTCGCCGACGCGATCGCGGAGGGACGAGCGGACGCGCACCCCGTGCCCGATATCGAGGAGGG
CGTCCGCAGCATGGCCTTCGTGGAGACCGCCGTCGCCGCCAGCCGCGACGAGTCCGGCTGGGTCGCGCTGGACGGGAGGA
TCGCATGA

Upstream 100 bases:

>100_bases
CCGGGGTGCGCGGCTTCTTCGTCGAGCAGGAGCCGCCGTTCGAACGGCCCCGGCTCGAGGCCGCCCGGATCAGCCACGAC
TTCCTGGGAGGGCTCCAGGC

Downstream 100 bases:

>100_bases
GGACGCTGAAGGGGCCCGGGATCTTCCTCGCCCAGTTCGTGGGACCGGAGCCGCCGTTCGATCGGCTGGAGACGCTGGCC
GACTGGGCCGCGGGCCTGGG

Product: oxidoreductase, Gfo/Idh/MocA family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MSVLRLAMVGGGPGAFIGPVHRMAAELDGRIRLVAGAFSRDPDKSAAAAQAWGVRGYADWSEMIAAEAGREDGAQAVAVV
TPNHLHLAVSRVALQAGLHVISDKPATRTLAEARELAAAVAASGRLYGLTYTYTGYPMVREAREIVRRGDLGSVRKVVVE
YAQGWLSRPREREGAKQAEWRTDPALAGAGCIGDIGVHAFNLAEFVSGRRVERLCADVGTVVPGRRLDDDCNVLLRFGGG
ARGVLIASQISAGARNGLKLQVYGESGGLTWSHERPSELTIDRLEGPSQTLHAASVYLSGPAQAASRIPTGHPEGFIEAF
ANLYRDFADAIAEGRADAHPVPDIEEGVRSMAFVETAVAASRDESGWVALDGRIA

Sequences:

>Translated_375_residues
MSVLRLAMVGGGPGAFIGPVHRMAAELDGRIRLVAGAFSRDPDKSAAAAQAWGVRGYADWSEMIAAEAGREDGAQAVAVV
TPNHLHLAVSRVALQAGLHVISDKPATRTLAEARELAAAVAASGRLYGLTYTYTGYPMVREAREIVRRGDLGSVRKVVVE
YAQGWLSRPREREGAKQAEWRTDPALAGAGCIGDIGVHAFNLAEFVSGRRVERLCADVGTVVPGRRLDDDCNVLLRFGGG
ARGVLIASQISAGARNGLKLQVYGESGGLTWSHERPSELTIDRLEGPSQTLHAASVYLSGPAQAASRIPTGHPEGFIEAF
ANLYRDFADAIAEGRADAHPVPDIEEGVRSMAFVETAVAASRDESGWVALDGRIA
>Mature_374_residues
SVLRLAMVGGGPGAFIGPVHRMAAELDGRIRLVAGAFSRDPDKSAAAAQAWGVRGYADWSEMIAAEAGREDGAQAVAVVT
PNHLHLAVSRVALQAGLHVISDKPATRTLAEARELAAAVAASGRLYGLTYTYTGYPMVREAREIVRRGDLGSVRKVVVEY
AQGWLSRPREREGAKQAEWRTDPALAGAGCIGDIGVHAFNLAEFVSGRRVERLCADVGTVVPGRRLDDDCNVLLRFGGGA
RGVLIASQISAGARNGLKLQVYGESGGLTWSHERPSELTIDRLEGPSQTLHAASVYLSGPAQAASRIPTGHPEGFIEAFA
NLYRDFADAIAEGRADAHPVPDIEEGVRSMAFVETAVAASRDESGWVALDGRIA

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39713; Mature: 39582

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLRLAMVGGGPGAFIGPVHRMAAELDGRIRLVAGAFSRDPDKSAAAAQAWGVRGYADW
CCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCH
SEMIAAEAGREDGAQAVAVVTPNHLHLAVSRVALQAGLHVISDKPATRTLAEARELAAAV
HHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHH
AASGRLYGLTYTYTGYPMVREAREIVRRGDLGSVRKVVVEYAQGWLSRPREREGAKQAEW
HHCCEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCC
RTDPALAGAGCIGDIGVHAFNLAEFVSGRRVERLCADVGTVVPGRRLDDDCNVLLRFGGG
CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC
ARGVLIASQISAGARNGLKLQVYGESGGLTWSHERPSELTIDRLEGPSQTLHAASVYLSG
CCEEEEEEHHCCCCCCCCEEEEEECCCCEEECCCCCCCCCHHHCCCCCHHHHHHEEEECC
PAQAASRIPTGHPEGFIEAFANLYRDFADAIAEGRADAHPVPDIEEGVRSMAFVETAVAA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SRDESGWVALDGRIA
CCCCCCEEEECCCCC
>Mature Secondary Structure 
SVLRLAMVGGGPGAFIGPVHRMAAELDGRIRLVAGAFSRDPDKSAAAAQAWGVRGYADW
CCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCH
SEMIAAEAGREDGAQAVAVVTPNHLHLAVSRVALQAGLHVISDKPATRTLAEARELAAAV
HHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHH
AASGRLYGLTYTYTGYPMVREAREIVRRGDLGSVRKVVVEYAQGWLSRPREREGAKQAEW
HHCCEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCC
RTDPALAGAGCIGDIGVHAFNLAEFVSGRRVERLCADVGTVVPGRRLDDDCNVLLRFGGG
CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC
ARGVLIASQISAGARNGLKLQVYGESGGLTWSHERPSELTIDRLEGPSQTLHAASVYLSG
CCEEEEEEHHCCCCCCCCEEEEEECCCCEEECCCCCCCCCHHHCCCCCHHHHHHEEEECC
PAQAASRIPTGHPEGFIEAFANLYRDFADAIAEGRADAHPVPDIEEGVRSMAFVETAVAA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SRDESGWVALDGRIA
CCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]