| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105539
Identifier: 197105539
GI number: 197105539
Start: 2322256
End: 2323545
Strand: Direct
Name: 197105539
Synonym: PHZ_c2076
Alternate gene names: NA
Gene position: 2322256-2323545 (Clockwise)
Preceding gene: 197105533
Following gene: 197105540
Centisome position: 58.11
GC content: 65.12
Gene sequence:
>1290_bases ATGTTCGCCACCGGGATCGAGAACTCGATCCCGAAGATCCAGAACGGCAGCATCCGCATCGACCAGATGGAGGCGTGCGG CCACTACCGCCATTGGCGAAAGGACTTCGACCTCGTCGAGGAGCTGGGGCTGCGATACCTCCGCTACGGCCCGCCGCTGC ACACCAGCTTCCTCGGCCCCGACAGGTTCGACTGGGAGTTCGCCGACGTCACCTTCGCCGAGCTGCGGCGCCGCGACATC AACCCCATCGTGGACCTGTGCCACTTCGGCGTGCCCGACTGGATCGGCGACTTCCAGAACCCGGACTTCCCCGAGCTGTT CGCCAGCTATGCGGCGGCCTTCGCCCGGCGCTTCCCGTGGGTCCAGCTCTACACGCCTGTGAACGAGATGTTCATCTGCG CCCAGTTCTCGGCCAAGTTCGGCTGGTGGAACGAGCAGGGCACCACCGACCTGACGTTCGTGACGGCGCTCAAGCACATC GTCCGGGCCAACGTGCGGGCCATGCAGGAAATCCTGAAGGTCCGGGCCGACGCGATCTTCATCCAGAGCGAGTCCTCAGA GTACTTCCACGCCGAGAACCCGCTGGCCATCAAGCCAGCCGAGATCGAGAACTCGCGTCGCTTCCTCTCGCTCGACCTGA ACTACGGACACCGGGTCGATTCCGAGATGTACGAGTACCTGATGGACAACGGGATGACGCGGGAGGAGTACCACTTCTTC CTCGGCAACTCGCTGCGCCACCACTGCATCCTGGGCAACGACTACTACTGGACGAACGAGCATCGGGTGTCGGCCAACGG CATGCACCGGGCCTCGGGCGAGATCTTCGGCTACTCCGAGATCACCCGGCAGTACTACAACCGCTACCGCCTGCCGGTGA TGCACACCGAGACCAACATCGCCGAGGGGCCGAACGGCGACGAGGCGGTGAACTGGCTCTGGAAAGAGTGGGCCAACGTC CTGCGCGTGCGCAACGACGGGGTGCCGACCGTCGGGTTCACCTGGTACTCGCTGACCGACCAGATCGACTGGGACGTGGG CTTGCGCGAACAAAACAACCGCGTCCACCCTGTCGGCCTGTACGACCTCAACCGCGAGATCCGCCCCGTGGGCCTCTCCT ACAAGCAGCTGATCCAGGACTGGCACGAGGTGCTGCCCACCCAGAGTGTCTGCCTCACCGTGCCCATCGTCCCACCGGCC GAGTACGGAGATCCGATCTCCGAGCGCCACCGCGTCGAGGCGCGGCGCCTGCGAGCCTACGAACTGGCCACCGGCGGCGA GGGCGGCTGA
Upstream 100 bases:
>100_bases GATCACCGCAAACTGAACCCCCGTCCCGCCCCGGAGTTGTAGCTTCGGGGAGCGATGTCGCTCGCGCGAGGAAAGGGGAG GACGGACCATCTCCGCCTTC
Downstream 100 bases:
>100_bases GCCGATGCGGATCGGAGGCGCGCCGGTCGTCCGGCTGACCGCCGAGGCTCCCGCGGGCGCGCCGGCGGGGACTCCGGGCT TCGTGGAGGCCGAGATCCTG
Product: beta-glucosidase
Products: NA
Alternate protein names: Beta-Glucosidase; Glycoside Hydrolase Family Protein; UDP-Galactopyranose Mutase
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MFATGIENSIPKIQNGSIRIDQMEACGHYRHWRKDFDLVEELGLRYLRYGPPLHTSFLGPDRFDWEFADVTFAELRRRDI NPIVDLCHFGVPDWIGDFQNPDFPELFASYAAAFARRFPWVQLYTPVNEMFICAQFSAKFGWWNEQGTTDLTFVTALKHI VRANVRAMQEILKVRADAIFIQSESSEYFHAENPLAIKPAEIENSRRFLSLDLNYGHRVDSEMYEYLMDNGMTREEYHFF LGNSLRHHCILGNDYYWTNEHRVSANGMHRASGEIFGYSEITRQYYNRYRLPVMHTETNIAEGPNGDEAVNWLWKEWANV LRVRNDGVPTVGFTWYSLTDQIDWDVGLREQNNRVHPVGLYDLNREIRPVGLSYKQLIQDWHEVLPTQSVCLTVPIVPPA EYGDPISERHRVEARRLRAYELATGGEGG
Sequences:
>Translated_429_residues MFATGIENSIPKIQNGSIRIDQMEACGHYRHWRKDFDLVEELGLRYLRYGPPLHTSFLGPDRFDWEFADVTFAELRRRDI NPIVDLCHFGVPDWIGDFQNPDFPELFASYAAAFARRFPWVQLYTPVNEMFICAQFSAKFGWWNEQGTTDLTFVTALKHI VRANVRAMQEILKVRADAIFIQSESSEYFHAENPLAIKPAEIENSRRFLSLDLNYGHRVDSEMYEYLMDNGMTREEYHFF LGNSLRHHCILGNDYYWTNEHRVSANGMHRASGEIFGYSEITRQYYNRYRLPVMHTETNIAEGPNGDEAVNWLWKEWANV LRVRNDGVPTVGFTWYSLTDQIDWDVGLREQNNRVHPVGLYDLNREIRPVGLSYKQLIQDWHEVLPTQSVCLTVPIVPPA EYGDPISERHRVEARRLRAYELATGGEGG >Mature_429_residues MFATGIENSIPKIQNGSIRIDQMEACGHYRHWRKDFDLVEELGLRYLRYGPPLHTSFLGPDRFDWEFADVTFAELRRRDI NPIVDLCHFGVPDWIGDFQNPDFPELFASYAAAFARRFPWVQLYTPVNEMFICAQFSAKFGWWNEQGTTDLTFVTALKHI VRANVRAMQEILKVRADAIFIQSESSEYFHAENPLAIKPAEIENSRRFLSLDLNYGHRVDSEMYEYLMDNGMTREEYHFF LGNSLRHHCILGNDYYWTNEHRVSANGMHRASGEIFGYSEITRQYYNRYRLPVMHTETNIAEGPNGDEAVNWLWKEWANV LRVRNDGVPTVGFTWYSLTDQIDWDVGLREQNNRVHPVGLYDLNREIRPVGLSYKQLIQDWHEVLPTQSVCLTVPIVPPA EYGDPISERHRVEARRLRAYELATGGEGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50030; Mature: 50030
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFATGIENSIPKIQNGSIRIDQMEACGHYRHWRKDFDLVEELGLRYLRYGPPLHTSFLGP CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DRFDWEFADVTFAELRRRDINPIVDLCHFGVPDWIGDFQNPDFPELFASYAAAFARRFPW CCCCCCHHCCCHHHHHHCCCHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCC VQLYTPVNEMFICAQFSAKFGWWNEQGTTDLTFVTALKHIVRANVRAMQEILKVRADAIF EEEECCCCCEEEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE IQSESSEYFHAENPLAIKPAEIENSRRFLSLDLNYGHRVDSEMYEYLMDNGMTREEYHFF EECCCCCEEECCCCCEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHH LGNSLRHHCILGNDYYWTNEHRVSANGMHRASGEIFGYSEITRQYYNRYRLPVMHTETNI HCCCCCCEEEECCCEEECCCCEECCCCCCCCCCCEECHHHHHHHHHHHCCCEEEECCCCC AEGPNGDEAVNWLWKEWANVLRVRNDGVPTVGFTWYSLTDQIDWDVGLREQNNRVHPVGL CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEE YDLNREIRPVGLSYKQLIQDWHEVLPTQSVCLTVPIVPPAEYGDPISERHRVEARRLRAY EECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHE ELATGGEGG EECCCCCCC >Mature Secondary Structure MFATGIENSIPKIQNGSIRIDQMEACGHYRHWRKDFDLVEELGLRYLRYGPPLHTSFLGP CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DRFDWEFADVTFAELRRRDINPIVDLCHFGVPDWIGDFQNPDFPELFASYAAAFARRFPW CCCCCCHHCCCHHHHHHCCCHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCC VQLYTPVNEMFICAQFSAKFGWWNEQGTTDLTFVTALKHIVRANVRAMQEILKVRADAIF EEEECCCCCEEEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE IQSESSEYFHAENPLAIKPAEIENSRRFLSLDLNYGHRVDSEMYEYLMDNGMTREEYHFF EECCCCCEEECCCCCEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHH LGNSLRHHCILGNDYYWTNEHRVSANGMHRASGEIFGYSEITRQYYNRYRLPVMHTETNI HCCCCCCEEEECCCEEECCCCEECCCCCCCCCCCEECHHHHHHHHHHHCCCEEEECCCCC AEGPNGDEAVNWLWKEWANVLRVRNDGVPTVGFTWYSLTDQIDWDVGLREQNNRVHPVGL CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEE YDLNREIRPVGLSYKQLIQDWHEVLPTQSVCLTVPIVPPAEYGDPISERHRVEARRLRAY EECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHE ELATGGEGG EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA