| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105501
Identifier: 197105501
GI number: 197105501
Start: 2281701
End: 2282975
Strand: Direct
Name: 197105501
Synonym: PHZ_c2038
Alternate gene names: NA
Gene position: 2281701-2282975 (Clockwise)
Preceding gene: 197105500
Following gene: 197105508
Centisome position: 57.1
GC content: 72.78
Gene sequence:
>1275_bases TTGCCGCGTTCGGTCTGCGGGAGGCCGTCCTTGCCAAGCTGGCTCTTTCAACTCAGCCGGGCCCTCAACCGCCTGTGGGT CACGGTCGGCCTCTACAGCGCGCTCGGCATCGCCGCTGCGCTGGCCTCGGCGCAGTTCGGCCATCTGGTGCCAAGCGACT TCTCGCTGAAGCTCGGCTCGGACTCGGTCGACGACATCCTCTCGATCCTGGCCAGCAGCATGCTCGCCGTGGCGACATTC TCGCTGGCGACGCTGGTCACCGCCTACACCTCGCTGGTGGGAAGCGTGTCGCCGCGGGCCGCCGAGCTGCTCGTCTCGGA CGGGGGCGTGCGCCGTTCGCTGGCCACCTTCGTGGGCGCGTTTGTCTACAGCATCGTCGGCATCATCGCGGTGCACACGG GCTACTACGGCGCCGAGGGACGGGTGATCCTGTTCTTCGTCACCCTGGCGGTGCTGACGCTGGTCGTGCTGGCGATGCTG CGCTGGATCGGCCAGCTGTCGCAGCTGGGTCAGATCGGCGACCTGGTCGGCCGGGTCGTGGCCGTCACCGAGAAGGCGCT GCGGGCGCGGCCCATCCTGTGCGCACGCGCCTCGGAGGGCCGGCCGGCGGGGGAGCCAGACTGCACGCTGACCGCCGACG AGGTGGGCTATGTGCAGAACGTCGACCTCGACGGCCTGGCCGCGTTCGCCGAGCGGCGCAGCGTCCGGGTGCATCTGGAG GTGCTGCCGGGAGAGCTGGTGCACGCGGGCGCGAGGCTCGTATCCGTCGAAGGCGCCCGGCTCACCGACGAAGAGACCGA GGAGCTGCGCGGCAAGATCGCGGTCGGCGCCCGGCGCACCTTCGAGCAGGACCCGCGCTACGGCCTGACCGTGCTCGGAG AGATCGCCGCCCGCGCCTTGTCGCCCGGGGTCAACGAATTCGGCGTCGCGCGCGAGGTGACCGCGCGGACCGTCCGGCTG CTGGCCGAATGGACGCGCGAGGCGGAGGAGCCCGACACGCCGCCCGACGTGACCGTCCCGCCCCTGGGGATCGACGCGCT GCTGGAGGAGGCCCTGGGCCCGGTGGCGCGATACGGCGCCAGCAATCCCTCGCTCCAGTGCGAGCTGCAGCGCGCGCTGC TGGCCCTGGCCCGGACCGACGACGCGCGCATGGCGGCGGCGGCGCGGAGGCTCTCGCGGGCGGCGCTGGGCCACGCCCGC GCGGCGCTGAAGCGCAGGGGAGATTTCCTGGAGGTCCGGCGCGCCTCCGCGCCGGTCCTGCGCGGGGACGCGTAG
Upstream 100 bases:
>100_bases GGCTGCGCCGTCGCGCCCGAGAGCGCGCGCGCCGTGATCCGCACCGAGGGCGGCCGCCCGCCGCCGCCTAGCGCGACGGC AGGGCGGAGCCGAGCGGCCG
Downstream 100 bases:
>100_bases CGGCGCCTCAGGTCTCGACGAAGGCCTTCTCGAGCACGAAGTCGCCGGGCTGGGCGATCGAGCCCTCGACGAAGCCGCGG TCGAGGAGCTGCTGCTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MPRSVCGRPSLPSWLFQLSRALNRLWVTVGLYSALGIAAALASAQFGHLVPSDFSLKLGSDSVDDILSILASSMLAVATF SLATLVTAYTSLVGSVSPRAAELLVSDGGVRRSLATFVGAFVYSIVGIIAVHTGYYGAEGRVILFFVTLAVLTLVVLAML RWIGQLSQLGQIGDLVGRVVAVTEKALRARPILCARASEGRPAGEPDCTLTADEVGYVQNVDLDGLAAFAERRSVRVHLE VLPGELVHAGARLVSVEGARLTDEETEELRGKIAVGARRTFEQDPRYGLTVLGEIAARALSPGVNEFGVAREVTARTVRL LAEWTREAEEPDTPPDVTVPPLGIDALLEEALGPVARYGASNPSLQCELQRALLALARTDDARMAAAARRLSRAALGHAR AALKRRGDFLEVRRASAPVLRGDA
Sequences:
>Translated_424_residues MPRSVCGRPSLPSWLFQLSRALNRLWVTVGLYSALGIAAALASAQFGHLVPSDFSLKLGSDSVDDILSILASSMLAVATF SLATLVTAYTSLVGSVSPRAAELLVSDGGVRRSLATFVGAFVYSIVGIIAVHTGYYGAEGRVILFFVTLAVLTLVVLAML RWIGQLSQLGQIGDLVGRVVAVTEKALRARPILCARASEGRPAGEPDCTLTADEVGYVQNVDLDGLAAFAERRSVRVHLE VLPGELVHAGARLVSVEGARLTDEETEELRGKIAVGARRTFEQDPRYGLTVLGEIAARALSPGVNEFGVAREVTARTVRL LAEWTREAEEPDTPPDVTVPPLGIDALLEEALGPVARYGASNPSLQCELQRALLALARTDDARMAAAARRLSRAALGHAR AALKRRGDFLEVRRASAPVLRGDA >Mature_423_residues PRSVCGRPSLPSWLFQLSRALNRLWVTVGLYSALGIAAALASAQFGHLVPSDFSLKLGSDSVDDILSILASSMLAVATFS LATLVTAYTSLVGSVSPRAAELLVSDGGVRRSLATFVGAFVYSIVGIIAVHTGYYGAEGRVILFFVTLAVLTLVVLAMLR WIGQLSQLGQIGDLVGRVVAVTEKALRARPILCARASEGRPAGEPDCTLTADEVGYVQNVDLDGLAAFAERRSVRVHLEV LPGELVHAGARLVSVEGARLTDEETEELRGKIAVGARRTFEQDPRYGLTVLGEIAARALSPGVNEFGVAREVTARTVRLL AEWTREAEEPDTPPDVTVPPLGIDALLEEALGPVARYGASNPSLQCELQRALLALARTDDARMAAAARRLSRAALGHARA ALKRRGDFLEVRRASAPVLRGDA
Specific function: Unknown
COG id: COG4325
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45092; Mature: 44961
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSVCGRPSLPSWLFQLSRALNRLWVTVGLYSALGIAAALASAQFGHLVPSDFSLKLGS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC DSVDDILSILASSMLAVATFSLATLVTAYTSLVGSVSPRAAELLVSDGGVRRSLATFVGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH FVYSIVGIIAVHTGYYGAEGRVILFFVTLAVLTLVVLAMLRWIGQLSQLGQIGDLVGRVV HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVTEKALRARPILCARASEGRPAGEPDCTLTADEVGYVQNVDLDGLAAFAERRSVRVHLE HHHHHHHHCCCCEEEECCCCCCCCCCCCEEEHHHCCCEECCCHHHHHHHHHCCCEEEEEE VLPGELVHAGARLVSVEGARLTDEETEELRGKIAVGARRTFEQDPRYGLTVLGEIAARAL ECCCHHHHCCCCEEEECCCCCCCHHHHHHHCHHHHCHHHHHCCCCCCCHHHHHHHHHHHH SPGVNEFGVAREVTARTVRLLAEWTREAEEPDTPPDVTVPPLGIDALLEEALGPVARYGA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC SNPSLQCELQRALLALARTDDARMAAAARRLSRAALGHARAALKRRGDFLEVRRASAPVL CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC RGDA CCCC >Mature Secondary Structure PRSVCGRPSLPSWLFQLSRALNRLWVTVGLYSALGIAAALASAQFGHLVPSDFSLKLGS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC DSVDDILSILASSMLAVATFSLATLVTAYTSLVGSVSPRAAELLVSDGGVRRSLATFVGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH FVYSIVGIIAVHTGYYGAEGRVILFFVTLAVLTLVVLAMLRWIGQLSQLGQIGDLVGRVV HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVTEKALRARPILCARASEGRPAGEPDCTLTADEVGYVQNVDLDGLAAFAERRSVRVHLE HHHHHHHHCCCCEEEECCCCCCCCCCCCEEEHHHCCCEECCCHHHHHHHHHCCCEEEEEE VLPGELVHAGARLVSVEGARLTDEETEELRGKIAVGARRTFEQDPRYGLTVLGEIAARAL ECCCHHHHCCCCEEEECCCCCCCHHHHHHHCHHHHCHHHHHCCCCCCCHHHHHHHHHHHH SPGVNEFGVAREVTARTVRLLAEWTREAEEPDTPPDVTVPPLGIDALLEEALGPVARYGA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC SNPSLQCELQRALLALARTDDARMAAAARRLSRAALGHARAALKRRGDFLEVRRASAPVL CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC RGDA CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA