| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is nudG [C]
Identifier: 197105497
GI number: 197105497
Start: 2278088
End: 2278546
Strand: Reverse
Name: nudG [C]
Synonym: PHZ_c2034
Alternate gene names: 197105497
Gene position: 2278546-2278088 (Counterclockwise)
Preceding gene: 197105498
Following gene: 197105496
Centisome position: 57.02
GC content: 74.29
Gene sequence:
>459_bases ATGCCGGCCCCGCAGTTCGGCCGCCCCGAGCCCGGCCGCAGCTACAGGGACCGTCCCGCCGCCTTCGGGATCGTCGAGCG CGACGGCCGGATCGCCGTGGTGCGCGTCGCGAAGCCCGGCCATCCGGCCTGGATCGACCTGCCCGGCGGCGCCCTCGATC CCGGCGAGAGCGCCGAGCAGGCCGTGGTGCGCGAGTACGGCGAGGAGACCGGGCTGAAGGTCGCGGCCGGCGAGGCCTAC GCCCGCGCCGACCAGATGTTCGTCAACACCGACGGCGAGGCGTTCAACAACCGCGCCACGTTCTTCCGGCTGTCGCTGCA GGGCGAGGACCCGGCCCTGAAGATTGAGGACGACCATGCGCTGGCGTGGCTGGACCCGCAGGAGGCGCTCACCGCCCTGC GCCACGAGGCCCACGCCTGGGCCGTCGCCGCATGGCTGAGATTGCGCGCGCGCGCCTGA
Upstream 100 bases:
>100_bases ACGCCAGCGCCCGCCACAAGGTCGGCTGGCGCCCCGTGGCCGTGCAGGACGTGCTGGCGGGCAAGGTCGATCCCTGGCCC GCCCTCTACGGGATCGACTG
Downstream 100 bases:
>100_bases ACCGCTAGCAGCGCGCCATGACGGCGAAGATCATCGACGGCAAGGTCCTGGCCGAGCGCCTGCGCGGCCAGGTGGCGGAC GAGGTGGCGCGGCTGCGCGC
Product: MutT/nudix family protein
Products: CMP; diphosphate [C]
Alternate protein names: MutT/Nudix Family Protein; Nudix Hydrolase; Hydrolase NUDIX Family
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MPAPQFGRPEPGRSYRDRPAAFGIVERDGRIAVVRVAKPGHPAWIDLPGGALDPGESAEQAVVREYGEETGLKVAAGEAY ARADQMFVNTDGEAFNNRATFFRLSLQGEDPALKIEDDHALAWLDPQEALTALRHEAHAWAVAAWLRLRARA
Sequences:
>Translated_152_residues MPAPQFGRPEPGRSYRDRPAAFGIVERDGRIAVVRVAKPGHPAWIDLPGGALDPGESAEQAVVREYGEETGLKVAAGEAY ARADQMFVNTDGEAFNNRATFFRLSLQGEDPALKIEDDHALAWLDPQEALTALRHEAHAWAVAAWLRLRARA >Mature_151_residues PAPQFGRPEPGRSYRDRPAAFGIVERDGRIAVVRVAKPGHPAWIDLPGGALDPGESAEQAVVREYGEETGLKVAAGEAYA RADQMFVNTDGEAFNNRATFFRLSLQGEDPALKIEDDHALAWLDPQEALTALRHEAHAWAVAAWLRLRARA
Specific function: Specific For Pyrimidine Substrates. Acts On 5-Methyl- Dctp, Ctp And Dctp In Decreasing Order. [C]
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.1.- [C]
Molecular weight: Translated: 16655; Mature: 16524
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPQFGRPEPGRSYRDRPAAFGIVERDGRIAVVRVAKPGHPAWIDLPGGALDPGESAEQ CCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEECCCCCCCCCCCHHH AVVREYGEETGLKVAAGEAYARADQMFVNTDGEAFNNRATFFRLSLQGEDPALKIEDDHA HHHHHCCHHCCCEEECCCHHHCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEEECCCE LAWLDPQEALTALRHEAHAWAVAAWLRLRARA EEEECHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PAPQFGRPEPGRSYRDRPAAFGIVERDGRIAVVRVAKPGHPAWIDLPGGALDPGESAEQ CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEECCCCCCCCCCCHHH AVVREYGEETGLKVAAGEAYARADQMFVNTDGEAFNNRATFFRLSLQGEDPALKIEDDHA HHHHHCCHHCCCEEECCCHHHCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEEECCCE LAWLDPQEALTALRHEAHAWAVAAWLRLRARA EEEECHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: CTP; H2O [C]
Specific reaction: CTP + H2O = CMP + diphosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA