| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105438
Identifier: 197105438
GI number: 197105438
Start: 2205163
End: 2205855
Strand: Direct
Name: 197105438
Synonym: PHZ_c1975
Alternate gene names: NA
Gene position: 2205163-2205855 (Clockwise)
Preceding gene: 197105437
Following gene: 197105439
Centisome position: 55.18
GC content: 71.14
Gene sequence:
>693_bases ATGACCAATCTCATCGCCGCCGCCGCATTCTTCGTGCTGATCCATCTGCTGATCTCGGGGACCCGGGTCCGCGACGCCCT GACCGGCAGGATCGGAGACGGCCCCTACATGGGCCTGTTCTCCCTGACCTCGGCGGCGGGCCTCGTCTGGCTGGGCTTCG CCTTCGCCGCCGCCCGCAGCGCCCCTGACAACGACGTGCTGTGGGGAGTCTCCACCGGGACCCGCCACCTGCAGCTCCTC ATCCAGCTCGTGGCGGTGACGTTCATCGTCGTGGGCCTGACCACCCCCAACCCCACCAGCGTCCGCCAGGAGGGCGCGCT GGACCGGCCGGGCTTGGTGCGCGGCATGCTCCGGGTCACCCGCCACCCCTTCCTGTGGGGCGTCGCGATCTGGGCCCTGG GGCACCTGCTGGTGAACGGCGACGCCGCCAGCCTGATCCTGTTCGGCTCGATGCTGGCCCTCGGCCTGTTCGGCACCGCG AGCATCGACGCCAAGCGTCGGCGCAAGCTGGGGACCAAGTGGGACGCCTTCGCGGCCCAGACCTCGAACGTGCCCTTCCT GGCCATCGCCCAGGGCCGCCAGCGCCTGAGCTTGGGAGAGATCGGCTGGTGGCGGTTCGCCGTCGCGATCCTGGTTTGGG CCGCGCTGGCCTTCGGCCACCCCTGGCTGTTCGGCGTCCCCGCCCTCCCCTGA
Upstream 100 bases:
>100_bases ACCCCTCCGCAGGACGACGAGCCGGAGGACGAGTCGGCCGACGCGGCATGACTTGACGCTGTAAATTTATAAGGCCACGG TCCCGCGCCAGGAGGGCCCC
Downstream 100 bases:
>100_bases CGGCCTTGAAGTGGCCGACGGGCGGGAGTGGAATGGGTCCATGCCCGTCTTCGCCCCCACGACCCAGCTCGCCACCCACG AGGTCCTGAACCAGCCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NnrUfamily Protein; NnrU Protein; Denitrification Regulatory Protein; Denitrification Regulator Protein; MFS Superfamily Permease
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MTNLIAAAAFFVLIHLLISGTRVRDALTGRIGDGPYMGLFSLTSAAGLVWLGFAFAAARSAPDNDVLWGVSTGTRHLQLL IQLVAVTFIVVGLTTPNPTSVRQEGALDRPGLVRGMLRVTRHPFLWGVAIWALGHLLVNGDAASLILFGSMLALGLFGTA SIDAKRRRKLGTKWDAFAAQTSNVPFLAIAQGRQRLSLGEIGWWRFAVAILVWAALAFGHPWLFGVPALP
Sequences:
>Translated_230_residues MTNLIAAAAFFVLIHLLISGTRVRDALTGRIGDGPYMGLFSLTSAAGLVWLGFAFAAARSAPDNDVLWGVSTGTRHLQLL IQLVAVTFIVVGLTTPNPTSVRQEGALDRPGLVRGMLRVTRHPFLWGVAIWALGHLLVNGDAASLILFGSMLALGLFGTA SIDAKRRRKLGTKWDAFAAQTSNVPFLAIAQGRQRLSLGEIGWWRFAVAILVWAALAFGHPWLFGVPALP >Mature_229_residues TNLIAAAAFFVLIHLLISGTRVRDALTGRIGDGPYMGLFSLTSAAGLVWLGFAFAAARSAPDNDVLWGVSTGTRHLQLLI QLVAVTFIVVGLTTPNPTSVRQEGALDRPGLVRGMLRVTRHPFLWGVAIWALGHLLVNGDAASLILFGSMLALGLFGTAS IDAKRRRKLGTKWDAFAAQTSNVPFLAIAQGRQRLSLGEIGWWRFAVAILVWAALAFGHPWLFGVPALP
Specific function: Unknown
COG id: COG4094
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24678; Mature: 24547
Theoretical pI: Translated: 12.05; Mature: 12.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLIAAAAFFVLIHLLISGTRVRDALTGRIGDGPYMGLFSLTSAAGLVWLGFAFAAARS CCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC APDNDVLWGVSTGTRHLQLLIQLVAVTFIVVGLTTPNPTSVRQEGALDRPGLVRGMLRVT CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHH RHPFLWGVAIWALGHLLVNGDAASLILFGSMLALGLFGTASIDAKRRRKLGTKWDAFAAQ HCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHH TSNVPFLAIAQGRQRLSLGEIGWWRFAVAILVWAALAFGHPWLFGVPALP CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TNLIAAAAFFVLIHLLISGTRVRDALTGRIGDGPYMGLFSLTSAAGLVWLGFAFAAARS CHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC APDNDVLWGVSTGTRHLQLLIQLVAVTFIVVGLTTPNPTSVRQEGALDRPGLVRGMLRVT CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHH RHPFLWGVAIWALGHLLVNGDAASLILFGSMLALGLFGTASIDAKRRRKLGTKWDAFAAQ HCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHH TSNVPFLAIAQGRQRLSLGEIGWWRFAVAILVWAALAFGHPWLFGVPALP CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA