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The map label for this gene is greA [C]

Identifier: 197105386

GI number: 197105386

Start: 2154437

End: 2154922

Strand: Direct

Name: greA [C]

Synonym: PHZ_c1923

Alternate gene names: 197105386

Gene position: 2154437-2154922 (Clockwise)

Preceding gene: 197105384

Following gene: 197105387

Centisome position: 53.91

GC content: 72.43

Gene sequence:

>486_bases
ATGAGCAGCGCCTTCGTGCGCGAGCTGGACGAACTGCCGCCGGAGAGCCCTCCGGAGCGGGTCGTCAGCCAGCACCCCAA
CTATGTCACCTCCCGCGGGCTGAAGCTGATCGAGCGCGCCCTCGCCGACCTGGACCAGCGAATCGCCGGCTGCGAGGACG
AGGCGCAGATGGCCTGGCTGCGCCGCGACCAGCGCTACTGGGCGGCGCGTCGGGCCAACGCCCAGGTGGTCGAATCGCCC
GCCGATCCCGACGAGGTCGCGTTCGGCACGCGGGTGACCTTCCGCAAGGACGGCGGCGCGCCCGAGACCGTCGAACTGGT
CGGCGAGGATGAGGCCGAGCCCGCGCAGGGCCGGCTGAGCTGGGTCGCGCCCCTGGCCCGCGCCATGATCGGCGCCATGC
CGGGCGAGACGGTGGAGCTGGAGACCCGGACCCCGGCGATTCGGCTCGAGATCCTGGCGGTGGAACCGATCCGCCTGCTC
AACTGA

Upstream 100 bases:

>100_bases
CCTCGCGCCTTTTGATGTTTCGCGGCGCCCGCCGACGGCTCGAGCGTTGAGCCTGTCGGACCGCCGCGAGTCGCGCGGCC
GTCCGAGGAGAGTAGCACCC

Downstream 100 bases:

>100_bases
GGCGGGCGAAGGCGTTTACCCCCGCTTAACCAAAGCACCGGACCTTGCCCTCGTCTTCCTTGAAGACACCCCACCATCAC
CGACTAATTCCTGCCCGGCG

Product: transcription elongation factor GreA/GreB, family

Products: NA

Alternate protein names: GreA/GreB Family Elongation Factor; Transcription Elongation Factor GreB; Transcription Elongation Factor; Transcription Elongation Factor GreA/GreB; Transcription Elongation Factor GreA/GreB Family; Transcription Elongation Factor GreA; Transcription Elongation Factor Protein

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MSSAFVRELDELPPESPPERVVSQHPNYVTSRGLKLIERALADLDQRIAGCEDEAQMAWLRRDQRYWAARRANAQVVESP
ADPDEVAFGTRVTFRKDGGAPETVELVGEDEAEPAQGRLSWVAPLARAMIGAMPGETVELETRTPAIRLEILAVEPIRLL
N

Sequences:

>Translated_161_residues
MSSAFVRELDELPPESPPERVVSQHPNYVTSRGLKLIERALADLDQRIAGCEDEAQMAWLRRDQRYWAARRANAQVVESP
ADPDEVAFGTRVTFRKDGGAPETVELVGEDEAEPAQGRLSWVAPLARAMIGAMPGETVELETRTPAIRLEILAVEPIRLL
N
>Mature_160_residues
SSAFVRELDELPPESPPERVVSQHPNYVTSRGLKLIERALADLDQRIAGCEDEAQMAWLRRDQRYWAARRANAQVVESPA
DPDEVAFGTRVTFRKDGGAPETVELVGEDEAEPAQGRLSWVAPLARAMIGAMPGETVELETRTPAIRLEILAVEPIRLLN

Specific function: Necessary For Efficient RNA Polymerase Transcription Elongation Past Template-Encoded Arresting Sites. The Arresting Sites In DNA Have The Property Of Trapping A Certain Fraction Of Elongating RNA Polymerases That Pass Through, Resulting In Locked Ternar

COG id: COG0782

COG function: function code K; Transcription elongation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 259 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17872; Mature: 17741

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAFVRELDELPPESPPERVVSQHPNYVTSRGLKLIERALADLDQRIAGCEDEAQMAWL
CCHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RRDQRYWAARRANAQVVESPADPDEVAFGTRVTFRKDGGAPETVELVGEDEAEPAQGRLS
HHHHHHHHHHHCCCCEECCCCCCCHHCCCCEEEEECCCCCCCEEEEECCCCCCCCCCHHH
WVAPLARAMIGAMPGETVELETRTPAIRLEILAVEPIRLLN
HHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEECCHHHCC
>Mature Secondary Structure 
SSAFVRELDELPPESPPERVVSQHPNYVTSRGLKLIERALADLDQRIAGCEDEAQMAWL
CHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RRDQRYWAARRANAQVVESPADPDEVAFGTRVTFRKDGGAPETVELVGEDEAEPAQGRLS
HHHHHHHHHHHCCCCEECCCCCCCHHCCCCEEEEECCCCCCCEEEEECCCCCCCCCCHHH
WVAPLARAMIGAMPGETVELETRTPAIRLEILAVEPIRLLN
HHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA