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The map label for this gene is yngJ [H]

Identifier: 197105384

GI number: 197105384

Start: 2151499

End: 2152836

Strand: Direct

Name: yngJ [H]

Synonym: PHZ_c1921

Alternate gene names: 197105384

Gene position: 2151499-2152836 (Clockwise)

Preceding gene: 197105377

Following gene: 197105386

Centisome position: 53.84

GC content: 67.49

Gene sequence:

>1338_bases
ATGGACTTCGACCTGCCCCAGGATCTCGTCGACTACCTCGCCGAGCTGGACGACTTCATCGAACGCGAGATCAGGCCGCT
CGAGCAGCAGGACGACAACATCCGCTTCTTCGACCACCGGCGCGAGTACGCCCGCACCGACTGGGAGAACCAGGGCCTGC
CGCGCAAGGAGTGGGAGGAGCTGCTGGCCGAGGCGCGGCGCCGCGCCGACGCGGCCGGCCACTTCCGCTACGCCTGGCCC
GTCGAGATGGGCGGCAAGGGCGGCAGCCAGCTGGCCATGGCGGTGATCCGCGAGCACCTGGCGGCCAAGGGCCTGGGCCT
GCACAACGACCTGCAGAACGAGCACTCGATCGTCGGCAACAACCCGTTCGTGCTGATGTTCAAGAGCTTCGCCACGAACG
AACAATACGAGCGCTACGCCGACGCCCTGCTGTCGGGGAAGATGCGCACCGCCTTCGGCCTCACCGAACCCAACCACGGC
TCGGACGCCACATTCATGGAGACCCGCGCGGTCCGCGAGCCCCGCGACGGCAAGCCCGGCTGGCGCATCGACGGCGCGAA
GATGTGGACGACCGGCATGCACGTGGCGACCCACTGCATGGTCTTCGCGCGCACCTCGGGCAAGGACGGCGACGCGACCG
GCATCACCTGCTTCATCGTCCCGACCGACAATCCCGGGATCAACGTCGAGGAGTACCTCTGGACCTTCAACATGCCGACC
GACCACCCGCGGGTGTCGATCAGCGACTGCTGGGTGCCGGAGGATTCCTACTGGGGCGAGATCGACCGGGGCCTGGGCCT
GGGCCAGAGCTTCGTGCACCAGAACCGGATCCGGCAGGCCGCCTCCTCGCTCGGCGCGGCGGTGTTCTGCATCGAGGAGA
GCGTGAAGTACGCGCGCAGCCGCAAGCCGTTCGGCAAGGCGCTGGCCGAGAACCAGGCGATCCAGTGGCCGCTGGTCGAG
CTGTCCACCCAGTGCGAGATGCTGCGCCTGCTGATCCGCAAGACCGCCTGGCAGATGGACCGCATGGATCACAAGCAGAT
CGAGAAGGAGATCTCGGACAAGGTCTCGATGTGCAACTACTGGGCGAACCGGCTGGTCTGCGAGGCGGCCGACCGGGCCA
TGCAGGTGCATGGCGGCATCGGCTATTCGCGCCACAAGCCCTTCGAGCACATCTACCGCCACCACCGGCGCTACCGGATC
ACCGAGGGCTCGGAGGAGATCCAGATGCGCAAGGTCGCCGCCTACCTGTTCGGCTACCTCGGCCCCCGGCGGCAGATGTT
CAAGGAGATCGAGGCGGGCACGGACTACGTCCAGCCCATCCCCGCCCGGCACGGCTAG

Upstream 100 bases:

>100_bases
CCGATTGGTCTAGTCTGCCCCCGATCTGGCGGGGCCGCGGCCGGCTTGTAAATGCCTCCGCAGCGTCAACCCCGCCCAAG
AAAGGCGTGAGGAAACGGCC

Downstream 100 bases:

>100_bases
CGGTCAGGCCGCGGCGGGCTCGGCATAGAGCTGGTCGAAGACCGGCGGCAGGCTGTCGGGCAGGCCCAGGAGCGGGCCCG
AGGAGAGCAGCAGCACGACC

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MDFDLPQDLVDYLAELDDFIEREIRPLEQQDDNIRFFDHRREYARTDWENQGLPRKEWEELLAEARRRADAAGHFRYAWP
VEMGGKGGSQLAMAVIREHLAAKGLGLHNDLQNEHSIVGNNPFVLMFKSFATNEQYERYADALLSGKMRTAFGLTEPNHG
SDATFMETRAVREPRDGKPGWRIDGAKMWTTGMHVATHCMVFARTSGKDGDATGITCFIVPTDNPGINVEEYLWTFNMPT
DHPRVSISDCWVPEDSYWGEIDRGLGLGQSFVHQNRIRQAASSLGAAVFCIEESVKYARSRKPFGKALAENQAIQWPLVE
LSTQCEMLRLLIRKTAWQMDRMDHKQIEKEISDKVSMCNYWANRLVCEAADRAMQVHGGIGYSRHKPFEHIYRHHRRYRI
TEGSEEIQMRKVAAYLFGYLGPRRQMFKEIEAGTDYVQPIPARHG

Sequences:

>Translated_445_residues
MDFDLPQDLVDYLAELDDFIEREIRPLEQQDDNIRFFDHRREYARTDWENQGLPRKEWEELLAEARRRADAAGHFRYAWP
VEMGGKGGSQLAMAVIREHLAAKGLGLHNDLQNEHSIVGNNPFVLMFKSFATNEQYERYADALLSGKMRTAFGLTEPNHG
SDATFMETRAVREPRDGKPGWRIDGAKMWTTGMHVATHCMVFARTSGKDGDATGITCFIVPTDNPGINVEEYLWTFNMPT
DHPRVSISDCWVPEDSYWGEIDRGLGLGQSFVHQNRIRQAASSLGAAVFCIEESVKYARSRKPFGKALAENQAIQWPLVE
LSTQCEMLRLLIRKTAWQMDRMDHKQIEKEISDKVSMCNYWANRLVCEAADRAMQVHGGIGYSRHKPFEHIYRHHRRYRI
TEGSEEIQMRKVAAYLFGYLGPRRQMFKEIEAGTDYVQPIPARHG
>Mature_445_residues
MDFDLPQDLVDYLAELDDFIEREIRPLEQQDDNIRFFDHRREYARTDWENQGLPRKEWEELLAEARRRADAAGHFRYAWP
VEMGGKGGSQLAMAVIREHLAAKGLGLHNDLQNEHSIVGNNPFVLMFKSFATNEQYERYADALLSGKMRTAFGLTEPNHG
SDATFMETRAVREPRDGKPGWRIDGAKMWTTGMHVATHCMVFARTSGKDGDATGITCFIVPTDNPGINVEEYLWTFNMPT
DHPRVSISDCWVPEDSYWGEIDRGLGLGQSFVHQNRIRQAASSLGAAVFCIEESVKYARSRKPFGKALAENQAIQWPLVE
LSTQCEMLRLLIRKTAWQMDRMDHKQIEKEISDKVSMCNYWANRLVCEAADRAMQVHGGIGYSRHKPFEHIYRHHRRYRI
TEGSEEIQMRKVAAYLFGYLGPRRQMFKEIEAGTDYVQPIPARHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=419, Percent_Identity=27.2076372315036, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI4557231, Length=350, Percent_Identity=27.4285714285714, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI187960098, Length=350, Percent_Identity=27.4285714285714, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI21361497, Length=411, Percent_Identity=26.7639902676399, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI4501859, Length=337, Percent_Identity=26.7062314540059, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI7656849, Length=360, Percent_Identity=27.2222222222222, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI76496475, Length=402, Percent_Identity=26.6169154228856, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI4557235, Length=402, Percent_Identity=26.6169154228856, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI4501857, Length=389, Percent_Identity=24.4215938303342, Blast_Score=106, Evalue=6e-23,
Organism=Homo sapiens, GI226958412, Length=397, Percent_Identity=22.9219143576826, Blast_Score=96, Evalue=9e-20,
Organism=Homo sapiens, GI211971008, Length=294, Percent_Identity=25.8503401360544, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI48976061, Length=294, Percent_Identity=25.8503401360544, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI226958414, Length=333, Percent_Identity=24.3243243243243, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI38505218, Length=293, Percent_Identity=25.938566552901, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI7669494, Length=329, Percent_Identity=27.0516717325228, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI4503943, Length=314, Percent_Identity=27.3885350318471, Blast_Score=83, Evalue=5e-16,
Organism=Escherichia coli, GI87081958, Length=294, Percent_Identity=26.530612244898, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1786223, Length=288, Percent_Identity=27.0833333333333, Blast_Score=93, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17569725, Length=360, Percent_Identity=27.7777777777778, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI17534899, Length=357, Percent_Identity=28.2913165266106, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17570075, Length=423, Percent_Identity=24.3498817966903, Blast_Score=129, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI71985184, Length=340, Percent_Identity=29.1176470588235, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17533517, Length=406, Percent_Identity=25.615763546798, Blast_Score=118, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI17508101, Length=337, Percent_Identity=27.0029673590504, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17505929, Length=345, Percent_Identity=28.9855072463768, Blast_Score=112, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17506239, Length=344, Percent_Identity=27.0348837209302, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI71985192, Length=300, Percent_Identity=27.6666666666667, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17551932, Length=351, Percent_Identity=25.6410256410256, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17538396, Length=354, Percent_Identity=24.8587570621469, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71990804, Length=260, Percent_Identity=25, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17562446, Length=292, Percent_Identity=24.3150684931507, Blast_Score=85, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17534353, Length=270, Percent_Identity=25.9259259259259, Blast_Score=82, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI32563615, Length=242, Percent_Identity=28.5123966942149, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71982178, Length=228, Percent_Identity=26.7543859649123, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24660351, Length=417, Percent_Identity=28.0575539568345, Blast_Score=135, Evalue=8e-32,
Organism=Drosophila melanogaster, GI21356377, Length=354, Percent_Identity=28.2485875706215, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24646207, Length=382, Percent_Identity=28.0104712041885, Blast_Score=125, Evalue=9e-29,
Organism=Drosophila melanogaster, GI24666513, Length=346, Percent_Identity=28.9017341040462, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI21355753, Length=395, Percent_Identity=26.8354430379747, Blast_Score=111, Evalue=8e-25,
Organism=Drosophila melanogaster, GI281363737, Length=420, Percent_Identity=25.952380952381, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI19920834, Length=203, Percent_Identity=32.512315270936, Blast_Score=89, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 51222; Mature: 51222

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFDLPQDLVDYLAELDDFIEREIRPLEQQDDNIRFFDHRREYARTDWENQGLPRKEWEE
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCHHHHHH
LLAEARRRADAAGHFRYAWPVEMGGKGGSQLAMAVIREHLAAKGLGLHNDLQNEHSIVGN
HHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEECC
NPFVLMFKSFATNEQYERYADALLSGKMRTAFGLTEPNHGSDATFMETRAVREPRDGKPG
CCEEEEEECCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
WRIDGAKMWTTGMHVATHCMVFARTSGKDGDATGITCFIVPTDNPGINVEEYLWTFNMPT
CEECCCCHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHEEEECCCC
DHPRVSISDCWVPEDSYWGEIDRGLGLGQSFVHQNRIRQAASSLGAAVFCIEESVKYARS
CCCEEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHC
RKPFGKALAENQAIQWPLVELSTQCEMLRLLIRKTAWQMDRMDHKQIEKEISDKVSMCNY
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WANRLVCEAADRAMQVHGGIGYSRHKPFEHIYRHHRRYRITEGSEEIQMRKVAAYLFGYL
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCEECCCCHHHHHHHHHHHHHHHHC
GPRRQMFKEIEAGTDYVQPIPARHG
CHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MDFDLPQDLVDYLAELDDFIEREIRPLEQQDDNIRFFDHRREYARTDWENQGLPRKEWEE
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCHHHHHH
LLAEARRRADAAGHFRYAWPVEMGGKGGSQLAMAVIREHLAAKGLGLHNDLQNEHSIVGN
HHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEECC
NPFVLMFKSFATNEQYERYADALLSGKMRTAFGLTEPNHGSDATFMETRAVREPRDGKPG
CCEEEEEECCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
WRIDGAKMWTTGMHVATHCMVFARTSGKDGDATGITCFIVPTDNPGINVEEYLWTFNMPT
CEECCCCHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHEEEECCCC
DHPRVSISDCWVPEDSYWGEIDRGLGLGQSFVHQNRIRQAASSLGAAVFCIEESVKYARS
CCCEEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHC
RKPFGKALAENQAIQWPLVELSTQCEMLRLLIRKTAWQMDRMDHKQIEKEISDKVSMCNY
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WANRLVCEAADRAMQVHGGIGYSRHKPFEHIYRHHRRYRITEGSEEIQMRKVAAYLFGYL
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCEECCCCHHHHHHHHHHHHHHHHC
GPRRQMFKEIEAGTDYVQPIPARHG
CHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]