| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is fabG [H]
Identifier: 197105309
GI number: 197105309
Start: 2070637
End: 2071434
Strand: Reverse
Name: fabG [H]
Synonym: PHZ_c1846
Alternate gene names: 197105309
Gene position: 2071434-2070637 (Counterclockwise)
Preceding gene: 197105310
Following gene: 197105304
Centisome position: 51.83
GC content: 69.8
Gene sequence:
>798_bases ATGAGCCGCAAGTCGATCTTCATCACCGGCGCGGCCTCGGGCATGGGCCGCGAGACGGCGCTGCTGTTCGCCGAGAAGGG CTGGTTCGTCGGCGCCTACGACATCAACACCGAGGGGCTGAAGGACCTGCAGGCCGAGCTCGGGGCCGAGAACTGCCTGA CCCGCCGGCTCGACGTCACCGACCGGATGGATTTCCGGGCGGCGCTGGACGACTTCGCTCCCGCCGCGGGCGGGCGGCTG GACATCCTCTACAACAACGCCGGGATCGGCCGGGGCGGGCCGTTCCACCAGCAGCCCTTCGAGGACATCCTGGCCGTGGT GCAGGTGAACCTGATCGGCGTGCTGAACGGCATCTACGAGGCCGTGCCGCTGCTGAAGGCGACGCCCAACTCCCTCTGCT TCACCACGTCGTCCTCGTCGGCGACCTTCGGCATGCCGGGGATCGCGGTCTATTCGGCGACCAAGCACGCGGTGAAGGGG CTGACCGAAGCCCTCTCGGTGGAATTCCGGGCCCTGGGCATCCGCGTCGCCGACGTCCTTCCGGGCGTGATCGACACGCC GATCCTGCCGCCGGGCGTCGCCGAGGCCGCGCCAAAGGACGGGATGTTCCGGGCGATGCACCCGTCCGAGGTCGCGAAGG TGGTGTGGGAAGCCTACCACTCCGAGCGGCTGCACTGGTTCGTTCCCGAGGAGATCGCCGAGCTGGACAAGGCCAGCGCC CTCGATCCCGAGGCGGTCCGCGAGCAGATGGCGCAGGGCGGCCTGTTCGCCGGCCCGGCCGAGCCCAAGCCGGACTGA
Upstream 100 bases:
>100_bases TGCGCCACGCCGTGATCGCCGGTCGCGAGGCCTATCTGGCCGGCCGCATGCCCAAGCGGATGTACGCCGAGCCGTCCTCG CCGCTGTCGGGCCTGATCTG
Downstream 100 bases:
>100_bases GGGCGGCTCAGGCGCCGAGCAGCCGCGCCGCGTCGGCCTCGGCCGGCAGGCCCAGGGCCGAGAGCATCTCGCGCCGATCG GGTCCCAGCTTGGGCGGATA
Product: short chain dehydrogenase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MSRKSIFITGAASGMGRETALLFAEKGWFVGAYDINTEGLKDLQAELGAENCLTRRLDVTDRMDFRAALDDFAPAAGGRL DILYNNAGIGRGGPFHQQPFEDILAVVQVNLIGVLNGIYEAVPLLKATPNSLCFTTSSSSATFGMPGIAVYSATKHAVKG LTEALSVEFRALGIRVADVLPGVIDTPILPPGVAEAAPKDGMFRAMHPSEVAKVVWEAYHSERLHWFVPEEIAELDKASA LDPEAVREQMAQGGLFAGPAEPKPD
Sequences:
>Translated_265_residues MSRKSIFITGAASGMGRETALLFAEKGWFVGAYDINTEGLKDLQAELGAENCLTRRLDVTDRMDFRAALDDFAPAAGGRL DILYNNAGIGRGGPFHQQPFEDILAVVQVNLIGVLNGIYEAVPLLKATPNSLCFTTSSSSATFGMPGIAVYSATKHAVKG LTEALSVEFRALGIRVADVLPGVIDTPILPPGVAEAAPKDGMFRAMHPSEVAKVVWEAYHSERLHWFVPEEIAELDKASA LDPEAVREQMAQGGLFAGPAEPKPD >Mature_264_residues SRKSIFITGAASGMGRETALLFAEKGWFVGAYDINTEGLKDLQAELGAENCLTRRLDVTDRMDFRAALDDFAPAAGGRLD ILYNNAGIGRGGPFHQQPFEDILAVVQVNLIGVLNGIYEAVPLLKATPNSLCFTTSSSSATFGMPGIAVYSATKHAVKGL TEALSVEFRALGIRVADVLPGVIDTPILPPGVAEAAPKDGMFRAMHPSEVAKVVWEAYHSERLHWFVPEEIAELDKASAL DPEAVREQMAQGGLFAGPAEPKPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40807363, Length=232, Percent_Identity=29.7413793103448, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI4758504, Length=255, Percent_Identity=30.5882352941176, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI66933014, Length=191, Percent_Identity=34.5549738219895, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI40548397, Length=193, Percent_Identity=31.0880829015544, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI214010158, Length=193, Percent_Identity=31.0880829015544, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI214010156, Length=193, Percent_Identity=31.0880829015544, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI22758144, Length=193, Percent_Identity=31.0880829015544, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI223718074, Length=276, Percent_Identity=26.4492753623188, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI4504505, Length=234, Percent_Identity=29.0598290598291, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI31542939, Length=199, Percent_Identity=31.6582914572864, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI40254992, Length=185, Percent_Identity=29.1891891891892, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI142976729, Length=245, Percent_Identity=25.3061224489796, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI22507405, Length=191, Percent_Identity=29.3193717277487, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI87082100, Length=238, Percent_Identity=31.5126050420168, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788459, Length=186, Percent_Identity=30.6451612903226, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1787820, Length=219, Percent_Identity=27.3972602739726, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786701, Length=234, Percent_Identity=27.3504273504274, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI2367175, Length=240, Percent_Identity=30.8333333333333, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1786812, Length=188, Percent_Identity=30.3191489361702, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1787335, Length=185, Percent_Identity=30.2702702702703, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1790717, Length=207, Percent_Identity=28.9855072463768, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787905, Length=189, Percent_Identity=30.1587301587302, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193203117, Length=235, Percent_Identity=28.0851063829787, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI193203115, Length=232, Percent_Identity=28.0172413793103, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI71994600, Length=188, Percent_Identity=31.9148936170213, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17538182, Length=238, Percent_Identity=30.2521008403361, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17564282, Length=232, Percent_Identity=26.2931034482759, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI193204405, Length=216, Percent_Identity=30.0925925925926, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI32563809, Length=243, Percent_Identity=30.0411522633745, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17507613, Length=243, Percent_Identity=30.0411522633745, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17567345, Length=239, Percent_Identity=25.5230125523013, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17508895, Length=239, Percent_Identity=25.1046025104602, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17559104, Length=199, Percent_Identity=30.1507537688442, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI71997402, Length=235, Percent_Identity=27.2340425531915, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71994604, Length=187, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17562904, Length=198, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6323882, Length=196, Percent_Identity=27.0408163265306, Blast_Score=66, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6322067, Length=193, Percent_Identity=26.9430051813472, Blast_Score=66, Evalue=6e-12, Organism=Drosophila melanogaster, GI24639444, Length=225, Percent_Identity=33.7777777777778, Blast_Score=91, Evalue=7e-19, Organism=Drosophila melanogaster, GI17737361, Length=254, Percent_Identity=31.8897637795276, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI24651139, Length=200, Percent_Identity=31.5, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI281364892, Length=249, Percent_Identity=29.3172690763052, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI18859837, Length=220, Percent_Identity=31.3636363636364, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24644339, Length=192, Percent_Identity=30.7291666666667, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI24641232, Length=225, Percent_Identity=29.7777777777778, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24581726, Length=249, Percent_Identity=27.3092369477912, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI21357041, Length=188, Percent_Identity=28.7234042553192, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI28571526, Length=192, Percent_Identity=29.6875, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI21356301, Length=195, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24641388, Length=214, Percent_Identity=29.9065420560748, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI116007236, Length=195, Percent_Identity=27.1794871794872, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI23397609, Length=189, Percent_Identity=30.6878306878307, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 28341; Mature: 28209
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKSIFITGAASGMGRETALLFAEKGWFVGAYDINTEGLKDLQAELGAENCLTRRLDVT CCCCEEEEEECCCCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHHCHHHHHHHHCCCH DRMDFRAALDDFAPAAGGRLDILYNNAGIGRGGPFHQQPFEDILAVVQVNLIGVLNGIYE HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AVPLLKATPNSLCFTTSSSSATFGMPGIAVYSATKHAVKGLTEALSVEFRALGIRVADVL HHHHHHCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCEEHHHHC PGVIDTPILPPGVAEAAPKDGMFRAMHPSEVAKVVWEAYHSERLHWFVPEEIAELDKASA CCHHCCCCCCCCCHHCCCCCCCEECCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCC LDPEAVREQMAQGGLFAGPAEPKPD CCHHHHHHHHHCCCEECCCCCCCCC >Mature Secondary Structure SRKSIFITGAASGMGRETALLFAEKGWFVGAYDINTEGLKDLQAELGAENCLTRRLDVT CCCEEEEEECCCCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHHCHHHHHHHHCCCH DRMDFRAALDDFAPAAGGRLDILYNNAGIGRGGPFHQQPFEDILAVVQVNLIGVLNGIYE HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AVPLLKATPNSLCFTTSSSSATFGMPGIAVYSATKHAVKGLTEALSVEFRALGIRVADVL HHHHHHCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCEEHHHHC PGVIDTPILPPGVAEAAPKDGMFRAMHPSEVAKVVWEAYHSERLHWFVPEEIAELDKASA CCHHCCCCCCCCCHHCCCCCCCEECCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCC LDPEAVREQMAQGGLFAGPAEPKPD CCHHHHHHHHHCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]