| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105308
Identifier: 197105308
GI number: 197105308
Start: 2069154
End: 2070629
Strand: Direct
Name: 197105308
Synonym: PHZ_c1845
Alternate gene names: NA
Gene position: 2069154-2070629 (Clockwise)
Preceding gene: 197105307
Following gene: 197105312
Centisome position: 51.78
GC content: 73.92
Gene sequence:
>1476_bases ATGGCGGAACGGGTCGTCGTGATCGGCGCCGGCATGGCCGGCCTTTGGACCGCGCTGGCGCTCGCGCCCACCGGCCGCGA GGTGATCCTGCTCGAGCGGGACCCGCCGCCGCCGGACGACGATCCGGACGTGGCCTTCGAGACCTGGGCCCGTCGCGGGG TCGGCCAGCTCCGCCACAGCCACGCCTTCCTCGCCCGCCTACGGCTGCTCATCCGGGACCGTCATCCCGAGCTGCTGGCC GATCTCCACGCCGCCGGCTGCCGCGACCTGGGCCTCGACGGCTCGCTCACCGCCAGGCATCGCGAGCGCTACGTACCGAA GCCCGTGGACGAGGATCTCGTCATCCTGACCAGCCGGCGCACGACCCTGGAGCTGGTCATGCGGCGCTACGTGGCGCGCC TGCCAGGGGTCACGATCCGGTCCGGCGCCTTCGTGCGCGAACTCGTCATCGAGCCCGGCCCGGTCCCGCGCGTGACGGGC GTTCGCCTCGACGACAGCGTGCTTTCCGCCGACGTGGTCGTGGACGCCGCCGGCCGCACCTCGCCGGCGACCGAGCAGCT CGTCGCCGCAGGCGCGCCGGTCCGCGAGAATTCCGAAGGCGCCGGGGTCATCTACTTCACCCGCTTCTACCGGCTGCGGC CGGGCGCCGAGGAGCCGCCCCGGGGTCAGGCCCCGTCCAACGGCGACCTCGGCTACCTGAAGTTCGGGGTCTTTCCCGGG GACAGCGGCTGGTTCTCGATCACCCTGTGCACGCCCGAGATCGAGGAGGAGCTGCGCAAGGCGATCGTGGATCCCGCGGT GTTCGACGCCGTGTGCCGCGCCCTGCCCGGCCCTGCCCGCTGGATCGAGCCCGAGCGGGCCGAGGGCGCGAGCCGCGTGT TCGGCATGGGTCAGCTGGAGAGCCGCTGGCGGGACTTCGCGCCGGGCGGGCGCGCGGGCGTGCACGGCTTCTTCGCGCTG GGCGACAGCCTGGTGCGCAGCAATCCTCTCTACGGCCGCGGCTGCTCCTTCGCCGCGGTCTCGGCCGAACTGCTGCGGGA GGCCCTCGATGCGGGCTCCGACCCCGAGGCCCGGCTGGTCCGCTATGTCGCGGGCGTCGAGCGCGAGCTTCGCCCCTACT ACGAGGTCATGCGCGACGCCGACCGCACCGCCTTGCGCCGGGCCCGCCAAGCCCTGCTGGGAGCCCGGCCCAGCCTCCGC GGCCGGATGGTGAAGAGCTTCCTGGACGACGGCGTGGCGATCGCCCTGCGGGAGGACGTCGACCTACTGCGCGCGTTCCT GCGGGGCTTCCACATGCTGGAGCATCCCCAGGCGTGGCTGAAGCGGCCGGCCAATCTCGCGAAGGTCCTGGCGACCTGGG CCCGGCCGCGCCGGACCAAGGCCTATCCGCCCAAGCTGGGACCCGATCGGCGCGAGATGCTCTCGGCCCTGGGCCTGCCG GCCGAGGCCGACGCGGCGCGGCTGCTCGGCGCCTGA
Upstream 100 bases:
>100_bases CAAGGCCACGGACCTCAAGCGTCCGTCTGGAAATCCCTCCTAGCCCCTCCCCTTACGTCCCGGCGCCCGCGTAGGATCGT CGTTCTCTGGGGAGGGGACG
Downstream 100 bases:
>100_bases GCCGCCCTCAGTCCGGCTTGGGCTCGGCCGGGCCGGCGAACAGGCCGCCCTGCGCCATCTGCTCGCGGACCGCCTCGGGA TCGAGGGCGCTGGCCTTGTC
Product: NADPH-dependent glutamate synthase beta chain
Products: NA
Alternate protein names: NADPH-Dependent Glutamate Synthase Beta Chain; FAD-Dependent Oxidoreductase; Monooxygenase; Dehydrogenase Signal Peptide; Signal Peptide Protein
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MAERVVVIGAGMAGLWTALALAPTGREVILLERDPPPPDDDPDVAFETWARRGVGQLRHSHAFLARLRLLIRDRHPELLA DLHAAGCRDLGLDGSLTARHRERYVPKPVDEDLVILTSRRTTLELVMRRYVARLPGVTIRSGAFVRELVIEPGPVPRVTG VRLDDSVLSADVVVDAAGRTSPATEQLVAAGAPVRENSEGAGVIYFTRFYRLRPGAEEPPRGQAPSNGDLGYLKFGVFPG DSGWFSITLCTPEIEEELRKAIVDPAVFDAVCRALPGPARWIEPERAEGASRVFGMGQLESRWRDFAPGGRAGVHGFFAL GDSLVRSNPLYGRGCSFAAVSAELLREALDAGSDPEARLVRYVAGVERELRPYYEVMRDADRTALRRARQALLGARPSLR GRMVKSFLDDGVAIALREDVDLLRAFLRGFHMLEHPQAWLKRPANLAKVLATWARPRRTKAYPPKLGPDRREMLSALGLP AEADAARLLGA
Sequences:
>Translated_491_residues MAERVVVIGAGMAGLWTALALAPTGREVILLERDPPPPDDDPDVAFETWARRGVGQLRHSHAFLARLRLLIRDRHPELLA DLHAAGCRDLGLDGSLTARHRERYVPKPVDEDLVILTSRRTTLELVMRRYVARLPGVTIRSGAFVRELVIEPGPVPRVTG VRLDDSVLSADVVVDAAGRTSPATEQLVAAGAPVRENSEGAGVIYFTRFYRLRPGAEEPPRGQAPSNGDLGYLKFGVFPG DSGWFSITLCTPEIEEELRKAIVDPAVFDAVCRALPGPARWIEPERAEGASRVFGMGQLESRWRDFAPGGRAGVHGFFAL GDSLVRSNPLYGRGCSFAAVSAELLREALDAGSDPEARLVRYVAGVERELRPYYEVMRDADRTALRRARQALLGARPSLR GRMVKSFLDDGVAIALREDVDLLRAFLRGFHMLEHPQAWLKRPANLAKVLATWARPRRTKAYPPKLGPDRREMLSALGLP AEADAARLLGA >Mature_490_residues AERVVVIGAGMAGLWTALALAPTGREVILLERDPPPPDDDPDVAFETWARRGVGQLRHSHAFLARLRLLIRDRHPELLAD LHAAGCRDLGLDGSLTARHRERYVPKPVDEDLVILTSRRTTLELVMRRYVARLPGVTIRSGAFVRELVIEPGPVPRVTGV RLDDSVLSADVVVDAAGRTSPATEQLVAAGAPVRENSEGAGVIYFTRFYRLRPGAEEPPRGQAPSNGDLGYLKFGVFPGD SGWFSITLCTPEIEEELRKAIVDPAVFDAVCRALPGPARWIEPERAEGASRVFGMGQLESRWRDFAPGGRAGVHGFFALG DSLVRSNPLYGRGCSFAAVSAELLREALDAGSDPEARLVRYVAGVERELRPYYEVMRDADRTALRRARQALLGARPSLRG RMVKSFLDDGVAIALREDVDLLRAFLRGFHMLEHPQAWLKRPANLAKVLATWARPRRTKAYPPKLGPDRREMLSALGLPA EADAARLLGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53907; Mature: 53775
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERVVVIGAGMAGLWTALALAPTGREVILLERDPPPPDDDPDVAFETWARRGVGQLRHS CCCEEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH HAFLARLRLLIRDRHPELLADLHAAGCRDLGLDGSLTARHRERYVPKPVDEDLVILTSRR HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEECCH TTLELVMRRYVARLPGVTIRSGAFVRELVIEPGPVPRVTGVRLDDSVLSADVVVDAAGRT HHHHHHHHHHHHHCCCCEEECCHHHHHHHCCCCCCCCEECCEECHHHHHHHHEEECCCCC SPATEQLVAAGAPVRENSEGAGVIYFTRFYRLRPGAEEPPRGQAPSNGDLGYLKFGVFPG CCHHHHHHHCCCCCCCCCCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCCEEEEEEEEECC DSGWFSITLCTPEIEEELRKAIVDPAVFDAVCRALPGPARWIEPERAEGASRVFGMGQLE CCCEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHCCCCHHCCCCHHCCCHHHHHCCHHHH SRWRDFAPGGRAGVHGFFALGDSLVRSNPLYGRGCSFAAVSAELLREALDAGSDPEARLV HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH RYVAGVERELRPYYEVMRDADRTALRRARQALLGARPSLRGRMVKSFLDDGVAIALREDV HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEHHHH DLLRAFLRGFHMLEHPQAWLKRPANLAKVLATWARPRRTKAYPPKLGPDRREMLSALGLP HHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC AEADAARLLGA CCCCHHHHCCC >Mature Secondary Structure AERVVVIGAGMAGLWTALALAPTGREVILLERDPPPPDDDPDVAFETWARRGVGQLRHS CCEEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH HAFLARLRLLIRDRHPELLADLHAAGCRDLGLDGSLTARHRERYVPKPVDEDLVILTSRR HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEECCH TTLELVMRRYVARLPGVTIRSGAFVRELVIEPGPVPRVTGVRLDDSVLSADVVVDAAGRT HHHHHHHHHHHHHCCCCEEECCHHHHHHHCCCCCCCCEECCEECHHHHHHHHEEECCCCC SPATEQLVAAGAPVRENSEGAGVIYFTRFYRLRPGAEEPPRGQAPSNGDLGYLKFGVFPG CCHHHHHHHCCCCCCCCCCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCCEEEEEEEEECC DSGWFSITLCTPEIEEELRKAIVDPAVFDAVCRALPGPARWIEPERAEGASRVFGMGQLE CCCEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHCCCCHHCCCCHHCCCHHHHHCCHHHH SRWRDFAPGGRAGVHGFFALGDSLVRSNPLYGRGCSFAAVSAELLREALDAGSDPEARLV HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH RYVAGVERELRPYYEVMRDADRTALRRARQALLGARPSLRGRMVKSFLDDGVAIALREDV HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEHHHH DLLRAFLRGFHMLEHPQAWLKRPANLAKVLATWARPRRTKAYPPKLGPDRREMLSALGLP HHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC AEADAARLLGA CCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA