| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105307
Identifier: 197105307
GI number: 197105307
Start: 2068353
End: 2069096
Strand: Direct
Name: 197105307
Synonym: PHZ_c1844
Alternate gene names: NA
Gene position: 2068353-2069096 (Clockwise)
Preceding gene: 197105306
Following gene: 197105308
Centisome position: 51.76
GC content: 69.62
Gene sequence:
>744_bases ATGACCCTGACCGCCCTCAAGTCCGCGGCCGTGCTCGCCGCCGCCCTGTCCCTCGCCGGCTGCCAGCAGCAGAGCGACGA AGCCTTCGGCCAGCGCGTGCGCGCCTACCTGCTGGAGCACCCGGAAGTCCTGCAGGAGGTCTCGGTCGCCCTGCAGCAGA AGCAGCAGGCCGAGCTGGCCAAGGCCTCTTCGGACGCCATCGAGAAGCACCGCGCCCAGCTCGAGCGCGACCCGCGCGAC TTCGTGGCCAATCCCGACGGCAAGATCACGGTGGTCGAGTTCTTCGACTACAACTGCGCCTACTGCAAGATCGCCGCCCC GGAGGTCGTGAAGCTGATCCAGGAGAACCCGGACGTCCGGTTCGTCTTCAAGGAATTCGCCTTCCAGACTCCCGATTCCA TCGAGGCGGCGCACATCGCCCTGACGCCGCAGGCCAAGGCCAAGGGGCTCGAGCTGCACCGCCTGCTGATGGCTCAGAAG CCGCTCAACCAGGCCGCCATCGACCGGTCCCTGCGCGAGGCCGGCGTCGATCCCGCCGCGGCGCGGGCGGCGGCCAAGGA CCCCGCGATCGAGCGCCAGCTGCTGGACGTGCGCGCCCTCGCCCAGGCGCTGCACATCGACGGCACGCCGGCCTTCGTGG TCGGCGACAAGGTCATCCCCGGCGCCGATATCGAGGCTCTGAGGGCGGCCATCGCCGCCGCCAAGGCCACGGACCTCAAG CGTCCGTCTGGAAATCCCTCCTAG
Upstream 100 bases:
>100_bases CCGAACCCTCCCGCGACGAACTGCGGGAACTGGCCCGCGAGGGCTCCACCACGCGCCGCTCGCGTTGAGCCGCCGCCGAA AGCCCTCTATCTCCACGCCC
Downstream 100 bases:
>100_bases CCCCTCCCCTTACGTCCCGGCGCCCGCGTAGGATCGTCGTTCTCTGGGGAGGGGACGATGGCGGAACGGGTCGTCGTGAT CGGCGCCGGCATGGCCGGCC
Product: protein-disulfide isomerase
Products: NA
Alternate protein names: Outer Membrane Protein; Dsba Oxidoreductase; Twin-Arginine Translocation Pathway Signal; 27kDa Outer Membrane Protein; 27 KDa Outer Membrane Protein; DSBA-Like Thioredoxin Domain Protein; ThiolDisulfide Interchange Protein DsbA; Metal Resistance Protein; Disulfide Bond Formation Protein D; Protein-Disulfide Isomerase; DsbA Oxidoreductase; Secreted Protein Suppressor For Copper-Sensitivity ScsC; DSBA-Like Thioredoxin Domain-Containing Protein; Secreted Protein Suppressor For Copper-Sensitivity C; Suppressor For Copper-Sensitivity C; Oxidoreductase; DSBA Family Oxidoreductase; Thioredoxin Domain-Containing Protein; BcfH Protein; ThiolDisulfide Interchange Protein; Thioredoxin Domain Protein; Disulfide Oxidoreductase; Secreted Copper-Sensitivity Suppressor C; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTLTALKSAAVLAAALSLAGCQQQSDEAFGQRVRAYLLEHPEVLQEVSVALQQKQQAELAKASSDAIEKHRAQLERDPRD FVANPDGKITVVEFFDYNCAYCKIAAPEVVKLIQENPDVRFVFKEFAFQTPDSIEAAHIALTPQAKAKGLELHRLLMAQK PLNQAAIDRSLREAGVDPAAARAAAKDPAIERQLLDVRALAQALHIDGTPAFVVGDKVIPGADIEALRAAIAAAKATDLK RPSGNPS
Sequences:
>Translated_247_residues MTLTALKSAAVLAAALSLAGCQQQSDEAFGQRVRAYLLEHPEVLQEVSVALQQKQQAELAKASSDAIEKHRAQLERDPRD FVANPDGKITVVEFFDYNCAYCKIAAPEVVKLIQENPDVRFVFKEFAFQTPDSIEAAHIALTPQAKAKGLELHRLLMAQK PLNQAAIDRSLREAGVDPAAARAAAKDPAIERQLLDVRALAQALHIDGTPAFVVGDKVIPGADIEALRAAIAAAKATDLK RPSGNPS >Mature_246_residues TLTALKSAAVLAAALSLAGCQQQSDEAFGQRVRAYLLEHPEVLQEVSVALQQKQQAELAKASSDAIEKHRAQLERDPRDF VANPDGKITVVEFFDYNCAYCKIAAPEVVKLIQENPDVRFVFKEFAFQTPDSIEAAHIALTPQAKAKGLELHRLLMAQKP LNQAAIDRSLREAGVDPAAARAAAKDPAIERQLLDVRALAQALHIDGTPAFVVGDKVIPGADIEALRAAIAAAKATDLKR PSGNPS
Specific function: Unknown
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26591; Mature: 26459
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTALKSAAVLAAALSLAGCQQQSDEAFGQRVRAYLLEHPEVLQEVSVALQQKQQAELA CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH KASSDAIEKHRAQLERDPRDFVANPDGKITVVEFFDYNCAYCKIAAPEVVKLIQENPDVR HHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEECCCCEEEEECHHHHHHHHHCCCCEE FVFKEFAFQTPDSIEAAHIALTPQAKAKGLELHRLLMAQKPLNQAAIDRSLREAGVDPAA EHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHH ARAAAKDPAIERQLLDVRALAQALHIDGTPAFVVGDKVIPGADIEALRAAIAAAKATDLK HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCC RPSGNPS CCCCCCC >Mature Secondary Structure TLTALKSAAVLAAALSLAGCQQQSDEAFGQRVRAYLLEHPEVLQEVSVALQQKQQAELA CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH KASSDAIEKHRAQLERDPRDFVANPDGKITVVEFFDYNCAYCKIAAPEVVKLIQENPDVR HHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEECCCCEEEEECHHHHHHHHHCCCCEE FVFKEFAFQTPDSIEAAHIALTPQAKAKGLELHRLLMAQKPLNQAAIDRSLREAGVDPAA EHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHH ARAAAKDPAIERQLLDVRALAQALHIDGTPAFVVGDKVIPGADIEALRAAIAAAKATDLK HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCC RPSGNPS CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA