Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197105307

Identifier: 197105307

GI number: 197105307

Start: 2068353

End: 2069096

Strand: Direct

Name: 197105307

Synonym: PHZ_c1844

Alternate gene names: NA

Gene position: 2068353-2069096 (Clockwise)

Preceding gene: 197105306

Following gene: 197105308

Centisome position: 51.76

GC content: 69.62

Gene sequence:

>744_bases
ATGACCCTGACCGCCCTCAAGTCCGCGGCCGTGCTCGCCGCCGCCCTGTCCCTCGCCGGCTGCCAGCAGCAGAGCGACGA
AGCCTTCGGCCAGCGCGTGCGCGCCTACCTGCTGGAGCACCCGGAAGTCCTGCAGGAGGTCTCGGTCGCCCTGCAGCAGA
AGCAGCAGGCCGAGCTGGCCAAGGCCTCTTCGGACGCCATCGAGAAGCACCGCGCCCAGCTCGAGCGCGACCCGCGCGAC
TTCGTGGCCAATCCCGACGGCAAGATCACGGTGGTCGAGTTCTTCGACTACAACTGCGCCTACTGCAAGATCGCCGCCCC
GGAGGTCGTGAAGCTGATCCAGGAGAACCCGGACGTCCGGTTCGTCTTCAAGGAATTCGCCTTCCAGACTCCCGATTCCA
TCGAGGCGGCGCACATCGCCCTGACGCCGCAGGCCAAGGCCAAGGGGCTCGAGCTGCACCGCCTGCTGATGGCTCAGAAG
CCGCTCAACCAGGCCGCCATCGACCGGTCCCTGCGCGAGGCCGGCGTCGATCCCGCCGCGGCGCGGGCGGCGGCCAAGGA
CCCCGCGATCGAGCGCCAGCTGCTGGACGTGCGCGCCCTCGCCCAGGCGCTGCACATCGACGGCACGCCGGCCTTCGTGG
TCGGCGACAAGGTCATCCCCGGCGCCGATATCGAGGCTCTGAGGGCGGCCATCGCCGCCGCCAAGGCCACGGACCTCAAG
CGTCCGTCTGGAAATCCCTCCTAG

Upstream 100 bases:

>100_bases
CCGAACCCTCCCGCGACGAACTGCGGGAACTGGCCCGCGAGGGCTCCACCACGCGCCGCTCGCGTTGAGCCGCCGCCGAA
AGCCCTCTATCTCCACGCCC

Downstream 100 bases:

>100_bases
CCCCTCCCCTTACGTCCCGGCGCCCGCGTAGGATCGTCGTTCTCTGGGGAGGGGACGATGGCGGAACGGGTCGTCGTGAT
CGGCGCCGGCATGGCCGGCC

Product: protein-disulfide isomerase

Products: NA

Alternate protein names: Outer Membrane Protein; Dsba Oxidoreductase; Twin-Arginine Translocation Pathway Signal; 27kDa Outer Membrane Protein; 27 KDa Outer Membrane Protein; DSBA-Like Thioredoxin Domain Protein; ThiolDisulfide Interchange Protein DsbA; Metal Resistance Protein; Disulfide Bond Formation Protein D; Protein-Disulfide Isomerase; DsbA Oxidoreductase; Secreted Protein Suppressor For Copper-Sensitivity ScsC; DSBA-Like Thioredoxin Domain-Containing Protein; Secreted Protein Suppressor For Copper-Sensitivity C; Suppressor For Copper-Sensitivity C; Oxidoreductase; DSBA Family Oxidoreductase; Thioredoxin Domain-Containing Protein; BcfH Protein; ThiolDisulfide Interchange Protein; Thioredoxin Domain Protein; Disulfide Oxidoreductase; Secreted Copper-Sensitivity Suppressor C; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTLTALKSAAVLAAALSLAGCQQQSDEAFGQRVRAYLLEHPEVLQEVSVALQQKQQAELAKASSDAIEKHRAQLERDPRD
FVANPDGKITVVEFFDYNCAYCKIAAPEVVKLIQENPDVRFVFKEFAFQTPDSIEAAHIALTPQAKAKGLELHRLLMAQK
PLNQAAIDRSLREAGVDPAAARAAAKDPAIERQLLDVRALAQALHIDGTPAFVVGDKVIPGADIEALRAAIAAAKATDLK
RPSGNPS

Sequences:

>Translated_247_residues
MTLTALKSAAVLAAALSLAGCQQQSDEAFGQRVRAYLLEHPEVLQEVSVALQQKQQAELAKASSDAIEKHRAQLERDPRD
FVANPDGKITVVEFFDYNCAYCKIAAPEVVKLIQENPDVRFVFKEFAFQTPDSIEAAHIALTPQAKAKGLELHRLLMAQK
PLNQAAIDRSLREAGVDPAAARAAAKDPAIERQLLDVRALAQALHIDGTPAFVVGDKVIPGADIEALRAAIAAAKATDLK
RPSGNPS
>Mature_246_residues
TLTALKSAAVLAAALSLAGCQQQSDEAFGQRVRAYLLEHPEVLQEVSVALQQKQQAELAKASSDAIEKHRAQLERDPRDF
VANPDGKITVVEFFDYNCAYCKIAAPEVVKLIQENPDVRFVFKEFAFQTPDSIEAAHIALTPQAKAKGLELHRLLMAQKP
LNQAAIDRSLREAGVDPAAARAAAKDPAIERQLLDVRALAQALHIDGTPAFVVGDKVIPGADIEALRAAIAAAKATDLKR
PSGNPS

Specific function: Unknown

COG id: COG1651

COG function: function code O; Protein-disulfide isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26591; Mature: 26459

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTALKSAAVLAAALSLAGCQQQSDEAFGQRVRAYLLEHPEVLQEVSVALQQKQQAELA
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
KASSDAIEKHRAQLERDPRDFVANPDGKITVVEFFDYNCAYCKIAAPEVVKLIQENPDVR
HHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEECCCCEEEEECHHHHHHHHHCCCCEE
FVFKEFAFQTPDSIEAAHIALTPQAKAKGLELHRLLMAQKPLNQAAIDRSLREAGVDPAA
EHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHH
ARAAAKDPAIERQLLDVRALAQALHIDGTPAFVVGDKVIPGADIEALRAAIAAAKATDLK
HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCC
RPSGNPS
CCCCCCC
>Mature Secondary Structure 
TLTALKSAAVLAAALSLAGCQQQSDEAFGQRVRAYLLEHPEVLQEVSVALQQKQQAELA
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
KASSDAIEKHRAQLERDPRDFVANPDGKITVVEFFDYNCAYCKIAAPEVVKLIQENPDVR
HHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEECCCCEEEEECHHHHHHHHHCCCCEE
FVFKEFAFQTPDSIEAAHIALTPQAKAKGLELHRLLMAQKPLNQAAIDRSLREAGVDPAA
EHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHH
ARAAAKDPAIERQLLDVRALAQALHIDGTPAFVVGDKVIPGADIEALRAAIAAAKATDLK
HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCC
RPSGNPS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA