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The map label for this gene is yfgC [C]

Identifier: 197105306

GI number: 197105306

Start: 2066854

End: 2068320

Strand: Direct

Name: yfgC [C]

Synonym: PHZ_c1843

Alternate gene names: 197105306

Gene position: 2066854-2068320 (Clockwise)

Preceding gene: 197105305

Following gene: 197105307

Centisome position: 51.72

GC content: 69.67

Gene sequence:

>1467_bases
GTGGCGCCGCGGCTGAGGCATTACATTCCGGTCGGGCTTCGAGGGCGGTCTGGAGAAGAGTTGAGCATGGTCTCCCCTGC
CCGATCGGTTTCCCGCCTCGCGATGAGCTTCGTCCTGGCGGCCACCGTGGCCTTCGGGGCGAAGCCCGCCGCGGCGCAGG
AGAGCCTTTCGCTCATCCGGGACACCGAGATCGAGGAGATCCTCGCCAAGGACTCCGAACCGATCCTGCGCGCCGCGGGC
ATCGACCCCCGGAATGTCGAGATCATCATCGTGGGGTCGAAGGAGCTCAACGCCTTCGCCGCCCCGCGGGTGATGGGCTT
CAACACCGGGCTCATCCTGGAGGCCGACACGCCCAACGAACTGCAGGGCGTGATCGCGCACGAGGTCAGCCACCTCGCCG
CCGGCCACAGCGCGCGGCGCGACGAGATGAACCGGGCCGGCATGCGGCCCTTCCTGCTGACCATGGGGCTGGGCGTGCTG
GCCGCGCTCGCCGGTTCGCCCGAGGCGGGCGCCGGCCTCGTGGGCAGCGCCGGTTATTTCGGCACCTTGGGCGCCCTGGG
CTACAGCCGCGAGCAGGAGAGCCGCGCCGACCAGGCCGGCGCCACCCTCCTCGACAAGGCCGGCCTGTCGGGCAAGGGCC
TGGCCGACTTCTTCGACAACTTCCGCTATCAGGAGGTCTTCGACGAGGCCCGGCGCTTCGCCTACTTCCGCAGCCACCCG
ATCTCTTCGGACCGGATCGAGGCCCTGCGCCGCCGGGTCGAGTCCCAGCCCAACTACGACAAGCCCGACACCCCTGAGTC
GCTGGCCGCGCACGCGATCATGAAGGCCAAGCTGGACGGCTTTCTGAACCCGCAGGTGGCGATCACAAAGTACAGCGAGA
CCGACGCCTCGTATCCGGCCCGCTACGCCCGTGCGATCGCCTACTACCAGCTTCGGGAGCCCGATCGGGCGATCCGGCTG
ATCGACGCCATGCTGCAGGAGCAGCCCGACAATCCCTACCTCTGGGAGCTGAAGGGCCAGATCCTGTTCGAGTTCGCCCG
CACCGAGGAGGCCGAGGAGCCCCAGCGGCGCTCGGTGGCGCTGAAGCCCGACGCGCCGCTGCTGCGGGTCAACCTGGGCC
AGACCCTCATCGCCCTTCCCGACAAGGCCAAGGTCGAGGAAGGGGTCGCCGAGCTGCGCAAGGCCCTCACCCAGGAAGAG
GACAACGCCGTCGCCTGGCGCCTGCTGGCCGAGGCCTACGACAAGCTGGGGCAGGACGGCATGGCTCGCCTCGCCACCGC
CGAGTTCAACTTCTGGGTCGGCGACCAGCGCCAGGCCCGGGTGTTCGCCATGCGGGCGCGCGAGAAGCTGGAGCGAGGCA
CCCCCGAATGGCGTCGCGCCACGGACATCGTGCTCGTTTCCGAACCCTCCCGCGACGAACTGCGGGAACTGGCCCGCGAG
GGCTCCACCACGCGCCGCTCGCGTTGA

Upstream 100 bases:

>100_bases
CGGCCGAGCCCGTGGCGGCTTCGGTTCCCGAGCCCGAGGCGCCGCAAGCGCCCGACCCGGCCGAGATCTCCGGGCCGCCG
CCGGCGCCGCGCAAAGGCTG

Downstream 100 bases:

>100_bases
GCCGCCGCCGAAAGCCCTCTATCTCCACGCCCATGACCCTGACCGCCCTCAAGTCCGCGGCCGTGCTCGCCGCCGCCCTG
TCCCTCGCCGGCTGCCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 487

Protein sequence:

>488_residues
MAPRLRHYIPVGLRGRSGEELSMVSPARSVSRLAMSFVLAATVAFGAKPAAAQESLSLIRDTEIEEILAKDSEPILRAAG
IDPRNVEIIIVGSKELNAFAAPRVMGFNTGLILEADTPNELQGVIAHEVSHLAAGHSARRDEMNRAGMRPFLLTMGLGVL
AALAGSPEAGAGLVGSAGYFGTLGALGYSREQESRADQAGATLLDKAGLSGKGLADFFDNFRYQEVFDEARRFAYFRSHP
ISSDRIEALRRRVESQPNYDKPDTPESLAAHAIMKAKLDGFLNPQVAITKYSETDASYPARYARAIAYYQLREPDRAIRL
IDAMLQEQPDNPYLWELKGQILFEFARTEEAEEPQRRSVALKPDAPLLRVNLGQTLIALPDKAKVEEGVAELRKALTQEE
DNAVAWRLLAEAYDKLGQDGMARLATAEFNFWVGDQRQARVFAMRAREKLERGTPEWRRATDIVLVSEPSRDELRELARE
GSTTRRSR

Sequences:

>Translated_488_residues
MAPRLRHYIPVGLRGRSGEELSMVSPARSVSRLAMSFVLAATVAFGAKPAAAQESLSLIRDTEIEEILAKDSEPILRAAG
IDPRNVEIIIVGSKELNAFAAPRVMGFNTGLILEADTPNELQGVIAHEVSHLAAGHSARRDEMNRAGMRPFLLTMGLGVL
AALAGSPEAGAGLVGSAGYFGTLGALGYSREQESRADQAGATLLDKAGLSGKGLADFFDNFRYQEVFDEARRFAYFRSHP
ISSDRIEALRRRVESQPNYDKPDTPESLAAHAIMKAKLDGFLNPQVAITKYSETDASYPARYARAIAYYQLREPDRAIRL
IDAMLQEQPDNPYLWELKGQILFEFARTEEAEEPQRRSVALKPDAPLLRVNLGQTLIALPDKAKVEEGVAELRKALTQEE
DNAVAWRLLAEAYDKLGQDGMARLATAEFNFWVGDQRQARVFAMRAREKLERGTPEWRRATDIVLVSEPSRDELRELARE
GSTTRRSR
>Mature_487_residues
APRLRHYIPVGLRGRSGEELSMVSPARSVSRLAMSFVLAATVAFGAKPAAAQESLSLIRDTEIEEILAKDSEPILRAAGI
DPRNVEIIIVGSKELNAFAAPRVMGFNTGLILEADTPNELQGVIAHEVSHLAAGHSARRDEMNRAGMRPFLLTMGLGVLA
ALAGSPEAGAGLVGSAGYFGTLGALGYSREQESRADQAGATLLDKAGLSGKGLADFFDNFRYQEVFDEARRFAYFRSHPI
SSDRIEALRRRVESQPNYDKPDTPESLAAHAIMKAKLDGFLNPQVAITKYSETDASYPARYARAIAYYQLREPDRAIRLI
DAMLQEQPDNPYLWELKGQILFEFARTEEAEEPQRRSVALKPDAPLLRVNLGQTLIALPDKAKVEEGVAELRKALTQEED
NAVAWRLLAEAYDKLGQDGMARLATAEFNFWVGDQRQARVFAMRAREKLERGTPEWRRATDIVLVSEPSRDELRELAREG
STTRRSR

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=345, Percent_Identity=23.768115942029, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87082185, Length=181, Percent_Identity=33.7016574585635, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 53982; Mature: 53851

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPRLRHYIPVGLRGRSGEELSMVSPARSVSRLAMSFVLAATVAFGAKPAAAQESLSLIR
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
DTEIEEILAKDSEPILRAAGIDPRNVEIIIVGSKELNAFAAPRVMGFNTGLILEADTPNE
HHHHHHHHHCCCCCHHHCCCCCCCCEEEEEECCCCCCHHHCCEEEECCCCEEEECCCCHH
LQGVIAHEVSHLAAGHSARRDEMNRAGMRPFLLTMGLGVLAALAGSPEAGAGLVGSAGYF
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
GTLGALGYSREQESRADQAGATLLDKAGLSGKGLADFFDNFRYQEVFDEARRFAYFRSHP
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCC
ISSDRIEALRRRVESQPNYDKPDTPESLAAHAIMKAKLDGFLNPQVAITKYSETDASYPA
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHH
RYARAIAYYQLREPDRAIRLIDAMLQEQPDNPYLWELKGQILFEFARTEEAEEPQRRSVA
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCCHHHCCEE
LKPDAPLLRVNLGQTLIALPDKAKVEEGVAELRKALTQEEDNAVAWRLLAEAYDKLGQDG
ECCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCH
MARLATAEFNFWVGDQRQARVFAMRAREKLERGTPEWRRATDIVLVSEPSRDELRELARE
HHHHHHEEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHCEEEEEECCCHHHHHHHHHC
GSTTRRSR
CCCCCCCC
>Mature Secondary Structure 
APRLRHYIPVGLRGRSGEELSMVSPARSVSRLAMSFVLAATVAFGAKPAAAQESLSLIR
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
DTEIEEILAKDSEPILRAAGIDPRNVEIIIVGSKELNAFAAPRVMGFNTGLILEADTPNE
HHHHHHHHHCCCCCHHHCCCCCCCCEEEEEECCCCCCHHHCCEEEECCCCEEEECCCCHH
LQGVIAHEVSHLAAGHSARRDEMNRAGMRPFLLTMGLGVLAALAGSPEAGAGLVGSAGYF
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
GTLGALGYSREQESRADQAGATLLDKAGLSGKGLADFFDNFRYQEVFDEARRFAYFRSHP
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCC
ISSDRIEALRRRVESQPNYDKPDTPESLAAHAIMKAKLDGFLNPQVAITKYSETDASYPA
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHH
RYARAIAYYQLREPDRAIRLIDAMLQEQPDNPYLWELKGQILFEFARTEEAEEPQRRSVA
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCCHHHCCEE
LKPDAPLLRVNLGQTLIALPDKAKVEEGVAELRKALTQEEDNAVAWRLLAEAYDKLGQDG
ECCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCH
MARLATAEFNFWVGDQRQARVFAMRAREKLERGTPEWRRATDIVLVSEPSRDELRELARE
HHHHHHEEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHCEEEEEECCCHHHHHHHHHC
GSTTRRSR
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]