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The map label for this gene is 197105251

Identifier: 197105251

GI number: 197105251

Start: 2001394

End: 2003076

Strand: Reverse

Name: 197105251

Synonym: PHZ_c1788

Alternate gene names: NA

Gene position: 2003076-2001394 (Counterclockwise)

Preceding gene: 197105252

Following gene: 197105250

Centisome position: 50.12

GC content: 71.06

Gene sequence:

>1683_bases
ATGGCGCGTAACAAGGACACCGACGAACTCGTCTTCCTGCCGCTGGGCGGGTCGAACGAGATCGGCATGAACTTCAACCT
CTACGGCTTCGGCCCGGCGCACGACCGCAAGTGGATCGTGGTGGACCTGGGCGTGACCTTCGGCGACCAGACCACGCCGG
GCGTCGAGGTGATCCTGCCCGACCCCGAGTTCATCGAGGAATACGCCGACCGCATCCTGGGGATCGTGCTGACCCACGCC
CACGAGGACCACATCGGGGCGGTCGCCTGGCTGTGGCCGCGCCTGAAGGCGCCGATCTACGCCACGCCGTTCACCGCCTT
CGTCCTGCGCGAGAAGCTGCGCGAGGCCGACCTGCTGGAGGCGGCGCAGATCACCGAGGTTCCGCTGGGCGGGACGATCG
AGCTCGGCCCCTTCAAGCTGGAGCTCATCACGCTCACCCACTCGATCCCGGAGCCGAACGGCCTGGCGATCCGCACGCCG
CTGGGCACCATCCTGCACACCGGGGACTGGAAGATCGACCCCGACCCGCTGCTGGGCGGGCCGACCGACGAGGACGCCAT
CCGCCGGCTGGGCGACGAGGGCGTGCTGGCCATGGTCTGCGATTCGACCAACGTCTTCGTCGACGGCCACGCCGGCTCCG
AGGCCGAGGTGCGGGCCGCGCTGATCCCGCTGATCGGCGGGCTGAAAGGCAAGGTGGCGGTCGCCTGCTTCGCCTCCAAC
GTGGCGCGGATGGACAGCGTCGCGCGCGCGGCGCAGGCGGCCGGCCGGCGGGTCTGTCTTGTCGGTCGCTCGATGATCCG
CATGGCCTCCGCGGCCAAGTCGGTCGGGCTGATGCAGGACCTGCCGCCGTTCGTCACCGAGGCCGAGGCCAACCACCATC
CGGCGAACGAGATCCTCTATCTCTGCACCGGCAGCCAGGGCGAGCCGCGCGCGGCCCTGGCCCGCATCGCCGACGGGACG
CATCCGCACGTGAGCCTCGGGGAAGGCGACCACTGCATCTTCTCCTCGCGGGTGATCCCTGGGAACGAGATCCCGATCCG
CAACCTGCAGAACAACCTCGCCGACCGCGGCGTGCGCCTCTACACCGAGCGCGACCACCCGGGCATCCACGTCTCGGGCC
ACCCGTGCCGGGACGAGCTGGCCGAGATGTACCGCTGGGCGCGGCCGCAGGTCGCCGTGCCGACCCACGGCGAGCGCCGC
CACCTGCTCGAGCACGCCGCCTTCGCCCGCGACCTGCAGGTGCCCCAGCAGGTCACCCCTCGGAACGGCGACATGGTCCG
CCTCGCGCCCGGCCGGGCCGAGATCGTCGACGAGGTGCCGTCGGGCCGCATCTATGTGGACGCCGGCGTGCTGACGCCCG
AGAACGGCCCGTCGCTGCGCGAGCGGCGGCACGCCTCGTACAATGGCGTCGTCGCGGTCTCAGTCGTGCTGGACGGGCGC
GGCCGCATCGCCTCGGGTCCGCAGGTGAGGGCGCTGGGGTTGCCCACCGACGAGGACTATCCGCTCGACGAGGTGCTGGA
AGACCTGGCCGACGAGGCCAAGGAGGCCCTTGGCCGGCTGAAGGGCGAGCAGCGCGAGCTGGACGACGAGATCGAGACCG
CCATGTCCCGCGCGGTGAAGAAGGCCAGCCAGCGCATCTGGGGCCGCCGGCCCGTGGTCGAGACGACGGTGCTGAGGATC
TGA

Upstream 100 bases:

>100_bases
CGCTCTTCCACGGCGCGACCGCGGCCATCGACAAGTTCGACCCCGACCTCACCATCCGCGGCATGCTGGAGATCTGGCGC
CGCAACCAGGCGAAGGCGTG

Downstream 100 bases:

>100_bases
CGTTCCGCTGCGTGATCTCGCGCCCGTTCCGCAACCGGCGTATACCGCCCGCATGAAGATCGGGAAGCTGAACCACGTGG
GCGTCGCCACGCCCTCCATC

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: RNase J [H]

Number of amino acids: Translated: 560; Mature: 559

Protein sequence:

>560_residues
MARNKDTDELVFLPLGGSNEIGMNFNLYGFGPAHDRKWIVVDLGVTFGDQTTPGVEVILPDPEFIEEYADRILGIVLTHA
HEDHIGAVAWLWPRLKAPIYATPFTAFVLREKLREADLLEAAQITEVPLGGTIELGPFKLELITLTHSIPEPNGLAIRTP
LGTILHTGDWKIDPDPLLGGPTDEDAIRRLGDEGVLAMVCDSTNVFVDGHAGSEAEVRAALIPLIGGLKGKVAVACFASN
VARMDSVARAAQAAGRRVCLVGRSMIRMASAAKSVGLMQDLPPFVTEAEANHHPANEILYLCTGSQGEPRAALARIADGT
HPHVSLGEGDHCIFSSRVIPGNEIPIRNLQNNLADRGVRLYTERDHPGIHVSGHPCRDELAEMYRWARPQVAVPTHGERR
HLLEHAAFARDLQVPQQVTPRNGDMVRLAPGRAEIVDEVPSGRIYVDAGVLTPENGPSLRERRHASYNGVVAVSVVLDGR
GRIASGPQVRALGLPTDEDYPLDEVLEDLADEAKEALGRLKGEQRELDDEIETAMSRAVKKASQRIWGRRPVVETTVLRI

Sequences:

>Translated_560_residues
MARNKDTDELVFLPLGGSNEIGMNFNLYGFGPAHDRKWIVVDLGVTFGDQTTPGVEVILPDPEFIEEYADRILGIVLTHA
HEDHIGAVAWLWPRLKAPIYATPFTAFVLREKLREADLLEAAQITEVPLGGTIELGPFKLELITLTHSIPEPNGLAIRTP
LGTILHTGDWKIDPDPLLGGPTDEDAIRRLGDEGVLAMVCDSTNVFVDGHAGSEAEVRAALIPLIGGLKGKVAVACFASN
VARMDSVARAAQAAGRRVCLVGRSMIRMASAAKSVGLMQDLPPFVTEAEANHHPANEILYLCTGSQGEPRAALARIADGT
HPHVSLGEGDHCIFSSRVIPGNEIPIRNLQNNLADRGVRLYTERDHPGIHVSGHPCRDELAEMYRWARPQVAVPTHGERR
HLLEHAAFARDLQVPQQVTPRNGDMVRLAPGRAEIVDEVPSGRIYVDAGVLTPENGPSLRERRHASYNGVVAVSVVLDGR
GRIASGPQVRALGLPTDEDYPLDEVLEDLADEAKEALGRLKGEQRELDDEIETAMSRAVKKASQRIWGRRPVVETTVLRI
>Mature_559_residues
ARNKDTDELVFLPLGGSNEIGMNFNLYGFGPAHDRKWIVVDLGVTFGDQTTPGVEVILPDPEFIEEYADRILGIVLTHAH
EDHIGAVAWLWPRLKAPIYATPFTAFVLREKLREADLLEAAQITEVPLGGTIELGPFKLELITLTHSIPEPNGLAIRTPL
GTILHTGDWKIDPDPLLGGPTDEDAIRRLGDEGVLAMVCDSTNVFVDGHAGSEAEVRAALIPLIGGLKGKVAVACFASNV
ARMDSVARAAQAAGRRVCLVGRSMIRMASAAKSVGLMQDLPPFVTEAEANHHPANEILYLCTGSQGEPRAALARIADGTH
PHVSLGEGDHCIFSSRVIPGNEIPIRNLQNNLADRGVRLYTERDHPGIHVSGHPCRDELAEMYRWARPQVAVPTHGERRH
LLEHAAFARDLQVPQQVTPRNGDMVRLAPGRAEIVDEVPSGRIYVDAGVLTPENGPSLRERRHASYNGVVAVSVVLDGRG
RIASGPQVRALGLPTDEDYPLDEVLEDLADEAKEALGRLKGEQRELDDEIETAMSRAVKKASQRIWGRRPVVETTVLRI

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR001587 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 60990; Mature: 60859

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARNKDTDELVFLPLGGSNEIGMNFNLYGFGPAHDRKWIVVDLGVTFGDQTTPGVEVILP
CCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEECEEECCCCCCCEEEEEC
DPEFIEEYADRILGIVLTHAHEDHIGAVAWLWPRLKAPIYATPFTAFVLREKLREADLLE
CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHH
AAQITEVPLGGTIELGPFKLELITLTHSIPEPNGLAIRTPLGTILHTGDWKIDPDPLLGG
HHHHHCCCCCCEEEECCEEEEEEEEEECCCCCCCEEEECCCCCEEECCCCCCCCCCCCCC
PTDEDAIRRLGDEGVLAMVCDSTNVFVDGHAGSEAEVRAALIPLIGGLKGKVAVACFASN
CCCHHHHHHCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHH
VARMDSVARAAQAAGRRVCLVGRSMIRMASAAKSVGLMQDLPPFVTEAEANHHPANEILY
HHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCHHHHCCCHHCCCCCCCCCCCCEEE
LCTGSQGEPRAALARIADGTHPHVSLGEGDHCIFSSRVIPGNEIPIRNLQNNLADRGVRL
EEECCCCCCHHHHHHHCCCCCCEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCEEE
YTERDHPGIHVSGHPCRDELAEMYRWARPQVAVPTHGERRHLLEHAAFARDLQVPQQVTP
EEECCCCCEEECCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHCCCCHHCCC
RNGDMVRLAPGRAEIVDEVPSGRIYVDAGVLTPENGPSLRERRHASYNGVVAVSVVLDGR
CCCCEEEECCCHHHHHHCCCCCEEEEEECEECCCCCCHHHHHHCCCCCCEEEEEEEECCC
GRIASGPQVRALGLPTDEDYPLDEVLEDLADEAKEALGRLKGEQRELDDEIETAMSRAVK
CCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KASQRIWGRRPVVETTVLRI
HHHHHHCCCCCCHHHHEECC
>Mature Secondary Structure 
ARNKDTDELVFLPLGGSNEIGMNFNLYGFGPAHDRKWIVVDLGVTFGDQTTPGVEVILP
CCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEECEEECCCCCCCEEEEEC
DPEFIEEYADRILGIVLTHAHEDHIGAVAWLWPRLKAPIYATPFTAFVLREKLREADLLE
CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHH
AAQITEVPLGGTIELGPFKLELITLTHSIPEPNGLAIRTPLGTILHTGDWKIDPDPLLGG
HHHHHCCCCCCEEEECCEEEEEEEEEECCCCCCCEEEECCCCCEEECCCCCCCCCCCCCC
PTDEDAIRRLGDEGVLAMVCDSTNVFVDGHAGSEAEVRAALIPLIGGLKGKVAVACFASN
CCCHHHHHHCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHH
VARMDSVARAAQAAGRRVCLVGRSMIRMASAAKSVGLMQDLPPFVTEAEANHHPANEILY
HHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCHHHHCCCHHCCCCCCCCCCCCEEE
LCTGSQGEPRAALARIADGTHPHVSLGEGDHCIFSSRVIPGNEIPIRNLQNNLADRGVRL
EEECCCCCCHHHHHHHCCCCCCEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCEEE
YTERDHPGIHVSGHPCRDELAEMYRWARPQVAVPTHGERRHLLEHAAFARDLQVPQQVTP
EEECCCCCEEECCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHCCCCHHCCC
RNGDMVRLAPGRAEIVDEVPSGRIYVDAGVLTPENGPSLRERRHASYNGVVAVSVVLDGR
CCCCEEEECCCHHHHHHCCCCCEEEEEECEECCCCCCHHHHHHCCCCCCEEEEEEEECCC
GRIASGPQVRALGLPTDEDYPLDEVLEDLADEAKEALGRLKGEQRELDDEIETAMSRAVK
CCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KASQRIWGRRPVVETTVLRI
HHHHHHCCCCCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]