| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105205
Identifier: 197105205
GI number: 197105205
Start: 1952020
End: 1952427
Strand: Reverse
Name: 197105205
Synonym: PHZ_c1742
Alternate gene names: NA
Gene position: 1952427-1952020 (Counterclockwise)
Preceding gene: 197105206
Following gene: 197105204
Centisome position: 48.86
GC content: 67.65
Gene sequence:
>408_bases ATGAGCGGCTCGCCCTTCGAGTGGCGCGCCGGCGGATGCCACTGCGGCGGCGTCCGCTTCGAGGTCGCCCTGCCGGACCG GGTCGAGGCCCAGGCCTGCAACTGCTCGATCTGCGCCAAGACCGGCTTCGTGCACATCATCGTGCCCGAGAGCCGCTTCC GCATCGTCAAGGGCGCCGATAGGCTGGCCGAATACACCTTCAACAGCCGGGTGGCGAAGCACCTCTTCTGCGCCGAATGC GGCGTGAAGAGCTTCTACCGCCCCAGGTCCAACCCCGACGGCTGGAGCGTCAACGCCCGGTGCCTCGATACGGTCGAGGG ACTGGAGATCGCGATCGAAGCCTTCGACGGCCAGAACTGGGAGGCGAACGCCGCCGGCCTGGCCCATCTGTCCAAGGAAC CCGCATGA
Upstream 100 bases:
>100_bases GCCAGGAGGACGTGCCGCTGCCCTACGCGGCGAACCTCGAGGCCCTGTCGCTGCCGTCCGTCGAGCGGATCGTGAAGGCC GCCAAGGCGGTCTCGTACCG
Downstream 100 bases:
>100_bases CGGACATCCTCATGCCCGCCCTGTCTCCGACCATGGAGGAGGGCACCCTCGCCAAATGGCACGTGAAGCAGGGCGACGCC GTCCGCTCGGGCGACGTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Gfa-Like Protein; Glutathione-Dependent Formaldehyde-Activating Protein Gfa
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSGSPFEWRAGGCHCGGVRFEVALPDRVEAQACNCSICAKTGFVHIIVPESRFRIVKGADRLAEYTFNSRVAKHLFCAEC GVKSFYRPRSNPDGWSVNARCLDTVEGLEIAIEAFDGQNWEANAAGLAHLSKEPA
Sequences:
>Translated_135_residues MSGSPFEWRAGGCHCGGVRFEVALPDRVEAQACNCSICAKTGFVHIIVPESRFRIVKGADRLAEYTFNSRVAKHLFCAEC GVKSFYRPRSNPDGWSVNARCLDTVEGLEIAIEAFDGQNWEANAAGLAHLSKEPA >Mature_134_residues SGSPFEWRAGGCHCGGVRFEVALPDRVEAQACNCSICAKTGFVHIIVPESRFRIVKGADRLAEYTFNSRVAKHLFCAECG VKSFYRPRSNPDGWSVNARCLDTVEGLEIAIEAFDGQNWEANAAGLAHLSKEPA
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56118234, Length=127, Percent_Identity=46.4566929133858, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI25149380, Length=111, Percent_Identity=40.5405405405405, Blast_Score=105, Evalue=1e-23, Organism=Caenorhabditis elegans, GI25149382, Length=84, Percent_Identity=45.2380952380952, Blast_Score=92, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14750; Mature: 14619
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSPFEWRAGGCHCGGVRFEVALPDRVEAQACNCSICAKTGFVHIIVPESRFRIVKGAD CCCCCCCCCCCCEEECCEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCEEEECCHH RLAEYTFNSRVAKHLFCAECGVKSFYRPRSNPDGWSVNARCLDTVEGLEIAIEAFDGQNW HHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCEECCEEECCCCCEEEEEEECCCCCC EANAAGLAHLSKEPA CCCCCHHHCCCCCCC >Mature Secondary Structure SGSPFEWRAGGCHCGGVRFEVALPDRVEAQACNCSICAKTGFVHIIVPESRFRIVKGAD CCCCCCCCCCCEEECCEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCEEEECCHH RLAEYTFNSRVAKHLFCAECGVKSFYRPRSNPDGWSVNARCLDTVEGLEIAIEAFDGQNW HHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCEECCEEECCCCCEEEEEEECCCCCC EANAAGLAHLSKEPA CCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA