| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is yfjG [C]
Identifier: 197105199
GI number: 197105199
Start: 1945627
End: 1946100
Strand: Reverse
Name: yfjG [C]
Synonym: PHZ_c1736
Alternate gene names: 197105199
Gene position: 1946100-1945627 (Counterclockwise)
Preceding gene: 197105200
Following gene: 197105197
Centisome position: 48.7
GC content: 67.72
Gene sequence:
>474_bases TTGCGGCACCACGTCTCCAAGGCGCTGCCCTATACGCCCGACCAGCTCTTCCAGCTGGTGGGGGACGTCGATCGCTACCC GGAGTTTGTACCCTGGGTCACGGCCCTGCGGACCTGGAACGCCCGCACGCTCAGCGAAGGCGTGGACAGCCTCGACGCCG AGGCCGCCGTCGGTTTCTCGTTCCTGAAGGAGCGTTTCGCCACCCGCGTCCGCCGCGACACGCTGAACCGGCAGATCGAC GTCAGCCTGCTGTCGGGCCCGTTCCGGAAGCTGGTGAACCGCTGGCGCTTCATCGATGCGGGCCACGGCTGCACGCGCGT GGAGTTCGACATCGAGTTCCAGTTCAAGTCTCGCCTGCTGGAGGGCCTGCTGCGGGCGAACTTCCACCATGCGGTCGAGC GGCTGATGGGCTGCTTCGAGGCCCGCGCGGAGGCCCTCTATGGCAAGGCGCAGCCCGAGATTTCGCCCGGCTGA
Upstream 100 bases:
>100_bases GGTTTCGGCCAGCCCGCTCACCCGCTCGTCGCATCACGCCGGCGAGGACTTCGCCCGCCTGCAGGCCGCGCGCCTCGCCA AGGAATCGGCGGCCTAGGGC
Downstream 100 bases:
>100_bases ACCGCTGGCTACCGTGGCGAGCCCCTAGGCCAGCCGGTCCCTCAGCGCCTGAAGCGCCGCCTGCACCGCGGCCAGCTGGA TCTCCTCGCGGGTCTCGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MRHHVSKALPYTPDQLFQLVGDVDRYPEFVPWVTALRTWNARTLSEGVDSLDAEAAVGFSFLKERFATRVRRDTLNRQID VSLLSGPFRKLVNRWRFIDAGHGCTRVEFDIEFQFKSRLLEGLLRANFHHAVERLMGCFEARAEALYGKAQPEISPG
Sequences:
>Translated_157_residues MRHHVSKALPYTPDQLFQLVGDVDRYPEFVPWVTALRTWNARTLSEGVDSLDAEAAVGFSFLKERFATRVRRDTLNRQID VSLLSGPFRKLVNRWRFIDAGHGCTRVEFDIEFQFKSRLLEGLLRANFHHAVERLMGCFEARAEALYGKAQPEISPG >Mature_157_residues MRHHVSKALPYTPDQLFQLVGDVDRYPEFVPWVTALRTWNARTLSEGVDSLDAEAAVGFSFLKERFATRVRRDTLNRQID VSLLSGPFRKLVNRWRFIDAGHGCTRVEFDIEFQFKSRLLEGLLRANFHHAVERLMGCFEARAEALYGKAQPEISPG
Specific function: Unknown
COG id: COG2867
COG function: function code I; Oligoketide cyclase/lipid transport protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0083 family [H]
Homologues:
Organism=Escherichia coli, GI1788972, Length=140, Percent_Identity=30.7142857142857, Blast_Score=84, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 18052; Mature: 18052
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHHVSKALPYTPDQLFQLVGDVDRYPEFVPWVTALRTWNARTLSEGVDSLDAEAAVGFS CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH FLKERFATRVRRDTLNRQIDVSLLSGPFRKLVNRWRFIDAGHGCTRVEFDIEFQFKSRLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHH EGLLRANFHHAVERLMGCFEARAEALYGKAQPEISPG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRHHVSKALPYTPDQLFQLVGDVDRYPEFVPWVTALRTWNARTLSEGVDSLDAEAAVGFS CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH FLKERFATRVRRDTLNRQIDVSLLSGPFRKLVNRWRFIDAGHGCTRVEFDIEFQFKSRLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHH EGLLRANFHHAVERLMGCFEARAEALYGKAQPEISPG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]