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The map label for this gene is yfhP [C]

Identifier: 197105185

GI number: 197105185

Start: 1929846

End: 1930280

Strand: Reverse

Name: yfhP [C]

Synonym: PHZ_c1722

Alternate gene names: 197105185

Gene position: 1930280-1929846 (Counterclockwise)

Preceding gene: 197105188

Following gene: 197105184

Centisome position: 48.3

GC content: 72.41

Gene sequence:

>435_bases
ATGCGACTCTCCACCAAAGGCCGCTACGCCGTGATGGCCATGGCAGACCTCGCGCGGCGCGAGGGCGAGGCCGCCCGCGC
CGTGGCGCTCGCTGACATCGCCGCGCGGCAGGAGATTTCCCTCTCTTACCTCGAACAGCTCTTCGCGCGGCTGCGCCGCA
AGGGCTTGGTGAAGAGCGCCCGCGGCCCCGGCGGCGGCTATCGCCTGGCCCGCACCGCCGAGCAGACCAGCATCGCCGAG
ATCGTCCATGCGGTGGACGAGCCGCTGCGCGCCACCCGCTGCGCCAACGCCGGCAAGGGCTGCATGACCCGCGGCGAGCG
CTGCCTCACCCACGACCTCTGGGCCGATCTCGGCCAGCAGATCGAGCATTACCTGGCCTCGGTCACCCTCGCCGACGTGA
TCGGCGGTCGCCTCGGAGCCCGCGCCGCCGCATGA

Upstream 100 bases:

>100_bases
CATCCGATGCGGCCGGTTCCCCAAGAGCCCTGCGCGAGGCGCCGGCTTGTAGCACAGGCCGCTTCGGATGCGCGGGAAAA
CTGCATCGGGCGAAGGAGCC

Downstream 100 bases:

>100_bases
GTTCGTCCATCTACCTCGACTACAACGCCACCGCCCCGGTGCGCCCGCAGGCGGCGGCCGCTGTGGCCCGCGCCCTGGAG
GTCGGAGGCAATCCGTCGTC

Product: predicted transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MRLSTKGRYAVMAMADLARREGEAARAVALADIAARQEISLSYLEQLFARLRRKGLVKSARGPGGGYRLARTAEQTSIAE
IVHAVDEPLRATRCANAGKGCMTRGERCLTHDLWADLGQQIEHYLASVTLADVIGGRLGARAAA

Sequences:

>Translated_144_residues
MRLSTKGRYAVMAMADLARREGEAARAVALADIAARQEISLSYLEQLFARLRRKGLVKSARGPGGGYRLARTAEQTSIAE
IVHAVDEPLRATRCANAGKGCMTRGERCLTHDLWADLGQQIEHYLASVTLADVIGGRLGARAAA
>Mature_144_residues
MRLSTKGRYAVMAMADLARREGEAARAVALADIAARQEISLSYLEQLFARLRRKGLVKSARGPGGGYRLARTAEQTSIAE
IVHAVDEPLRATRCANAGKGCMTRGERCLTHDLWADLGQQIEHYLASVTLADVIGGRLGARAAA

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=137, Percent_Identity=49.6350364963504, Blast_Score=127, Evalue=4e-31,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15507; Mature: 15507

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSTKGRYAVMAMADLARREGEAARAVALADIAARQEISLSYLEQLFARLRRKGLVKSA
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RGPGGGYRLARTAEQTSIAEIVHAVDEPLRATRCANAGKGCMTRGERCLTHDLWADLGQQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHH
IEHYLASVTLADVIGGRLGARAAA
HHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRLSTKGRYAVMAMADLARREGEAARAVALADIAARQEISLSYLEQLFARLRRKGLVKSA
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RGPGGGYRLARTAEQTSIAEIVHAVDEPLRATRCANAGKGCMTRGERCLTHDLWADLGQQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHH
IEHYLASVTLADVIGGRLGARAAA
HHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9582371 [H]