| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is ate
Identifier: 197105151
GI number: 197105151
Start: 1891256
End: 1892029
Strand: Direct
Name: ate
Synonym: PHZ_c1688
Alternate gene names: 197105151
Gene position: 1891256-1892029 (Clockwise)
Preceding gene: 197105150
Following gene: 197105152
Centisome position: 47.33
GC content: 69.25
Gene sequence:
>774_bases GTGACGCAGCATTTTCCGACCCGACAGCTCAGGTTCTTCCTGACCGCGCCGTCGCCGTGCCCGTACCTGCCCGAGCGGTA CGAGCGGAAGGTCTTCGCCCACCTGCCCCTCTCGGACGGGGCCACCGTGAACGACAGCCTGACCCAGGTGGGCTTCCGCC GGTCGCAGAACATCGCCTACCGCCCCGCCTGCGAGGCCTGCTCGGCGTGCGTCTCGGCGCGGCTGCCGGTGACCGACTAC GCCTTCTCCCGCTCCGAGCGGAAGGTGCTGGCCCGCAACGAGGATCTCGAACGGCATCTCGTCGAGGCCGAGGCCACGAT GGAGCAGTTCGACCTGCTCCGCCGCTATCTCCTGGCCCGCCACGCCGACGGCGGCATGGCCGAGATGACCTGGCCCGACT ACGTGGCGATGGTCGAGGACACCGCCGTCCGCACCCACATCATCGAGTACCGCACGCGGCCGTCGGACGGCGGACCGGGC GAACTCGTGGCCTGCGCGCTGGTCGACCTGATGAGCGACGGCCTGTCGCTGGTCTACAGCTTCTACGACCCGACGCTGGG GCGGCGCAGCCTGGGCTCGTTCGTGATCCTCGACCACGTGGTCCAGGCCGGGCTCGCCGGCCTGCCCTACGTCTATCTCG GCTACTGGGTCCGGGGCTCGGAGAAGATGGACTACAAGGTCCGCTTCTCGCCCATCGAGCTGCTCAAGGCCGAGGGCTGG ACGCTGATGTCCTCGCGCGACCTGCGGCCCAAGGACGAACTTCCGGGGCTGTGA
Upstream 100 bases:
>100_bases CTTCCGCCGGACCCGGGGTTGTAGCGAAGCGCCTTGCGCAACGGCCCCGCATGACGCCTAATCCATTGAGGCGCTTTGGT TTAGGGGCGGTCGCACTGTC
Downstream 100 bases:
>100_bases ATGGCGGGGATCGCCGCCCCGCGGCGGTGGCGCGGGGCCCTGCGGTCTTGCTAGATGGCGCTCGTGGTCACCTTCCCCTT CGGACACGGCGCATGGCGCG
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTQHFPTRQLRFFLTAPSPCPYLPERYERKVFAHLPLSDGATVNDSLTQVGFRRSQNIAYRPACEACSACVSARLPVTDY AFSRSERKVLARNEDLERHLVEAEATMEQFDLLRRYLLARHADGGMAEMTWPDYVAMVEDTAVRTHIIEYRTRPSDGGPG ELVACALVDLMSDGLSLVYSFYDPTLGRRSLGSFVILDHVVQAGLAGLPYVYLGYWVRGSEKMDYKVRFSPIELLKAEGW TLMSSRDLRPKDELPGL
Sequences:
>Translated_257_residues MTQHFPTRQLRFFLTAPSPCPYLPERYERKVFAHLPLSDGATVNDSLTQVGFRRSQNIAYRPACEACSACVSARLPVTDY AFSRSERKVLARNEDLERHLVEAEATMEQFDLLRRYLLARHADGGMAEMTWPDYVAMVEDTAVRTHIIEYRTRPSDGGPG ELVACALVDLMSDGLSLVYSFYDPTLGRRSLGSFVILDHVVQAGLAGLPYVYLGYWVRGSEKMDYKVRFSPIELLKAEGW TLMSSRDLRPKDELPGL >Mature_256_residues TQHFPTRQLRFFLTAPSPCPYLPERYERKVFAHLPLSDGATVNDSLTQVGFRRSQNIAYRPACEACSACVSARLPVTDYA FSRSERKVLARNEDLERHLVEAEATMEQFDLLRRYLLARHADGGMAEMTWPDYVAMVEDTAVRTHIIEYRTRPSDGGPGE LVACALVDLMSDGLSLVYSFYDPTLGRRSLGSFVILDHVVQAGLAGLPYVYLGYWVRGSEKMDYKVRFSPIELLKAEGWT LMSSRDLRPKDELPGL
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential)
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATE_PHEZH (B4RBQ2)
Other databases:
- EMBL: CP000747 - RefSeq: YP_002130528.1 - GeneID: 6791200 - GenomeReviews: CP000747_GR - KEGG: pzu:PHZ_c1688 - HOGENOM: HBG651116 - OMA: PQFYLTA - ProtClustDB: PRK01305 - GO: GO:0005737 - GO: GO:0006412 - HAMAP: MF_00689 - InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 - PIRSF: PIRSF037208
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.8
Molecular weight: Translated: 29093; Mature: 28961
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQHFPTRQLRFFLTAPSPCPYLPERYERKVFAHLPLSDGATVNDSLTQVGFRRSQNIAY CCCCCCCCEEEEEEECCCCCCCCCHHHCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCC RPACEACSACVSARLPVTDYAFSRSERKVLARNEDLERHLVEAEATMEQFDLLRRYLLAR CHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HADGGMAEMTWPDYVAMVEDTAVRTHIIEYRTRPSDGGPGELVACALVDLMSDGLSLVYS CCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FYDPTLGRRSLGSFVILDHVVQAGLAGLPYVYLGYWVRGSEKMDYKVRFSPIELLKAEGW HHCCCCCHHHHCCHHHHHHHHHHCCCCCCHHHHEEEEECCCCCCEEEECCHHHHHHCCCE TLMSSRDLRPKDELPGL EEECCCCCCCCCCCCCC >Mature Secondary Structure TQHFPTRQLRFFLTAPSPCPYLPERYERKVFAHLPLSDGATVNDSLTQVGFRRSQNIAY CCCCCCCEEEEEEECCCCCCCCCHHHCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCC RPACEACSACVSARLPVTDYAFSRSERKVLARNEDLERHLVEAEATMEQFDLLRRYLLAR CHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HADGGMAEMTWPDYVAMVEDTAVRTHIIEYRTRPSDGGPGELVACALVDLMSDGLSLVYS CCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FYDPTLGRRSLGSFVILDHVVQAGLAGLPYVYLGYWVRGSEKMDYKVRFSPIELLKAEGW HHCCCCCHHHHCCHHHHHHHHHHCCCCCCHHHHEEEEECCCCCCEEEECCHHHHHHCCCE TLMSSRDLRPKDELPGL EEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA