| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is yfgE [C]
Identifier: 197105152
GI number: 197105152
Start: 1891972
End: 1892793
Strand: Direct
Name: yfgE [C]
Synonym: PHZ_c1689
Alternate gene names: 197105152
Gene position: 1891972-1892793 (Clockwise)
Preceding gene: 197105151
Following gene: 197105153
Centisome position: 47.34
GC content: 72.38
Gene sequence:
>822_bases CTGGACGCTGATGTCCTCGCGCGACCTGCGGCCCAAGGACGAACTTCCGGGGCTGTGAATGGCGGGGATCGCCGCCCCGC GGCGGTGGCGCGGGGCCCTGCGGTCTTGCTAGATGGCGCTCGTGGTCACCTTCCCCTTCGGACACGGCGCATGGCGCGAC AGCTTCGGCTGAGGCTCGGACGGCCGGCCGCCTATTCCCGTGACGAATTCGCCGTGGGCCCCTCGAACGCCCAGGCGGTG GCGCTGCTGGACGCCTGGCCGGCGTGGCACGGCCGGGCGCTTGCGCTGGTGGGCCCCGAGGGCTCGGGCAAGACGCACCT GGCGCGCGCCTGGGCGCAGGCCGCCGGCGCCGTCGTGCTCGACCGCGAGGACCCGGACCTGCGCCAGGCCGACGGCCGCC CGGCGCTGCTGGAGGACGTCGACCAGGGCGTTCCCGGCGAGGCGCTGTTCCACCTGATCAATCTGGCGGCGCGCGAGGGC GGCGGGCTGCTGCTCACCGCGCGCACCCGGCCGGCGGCCTGGCCCGCGGCCCTGCCCGACCTGCGCTCGCGGTTGAACGC CCTGGCGGTCGCCGAGATCGAGCCCCCCGACGACGCGGTGCTGGAAGGCGTGCTGCGCAAATTCTTCCGTGACCGGAATA TTCGCCCGCCCGAGGAGGTCTATCCGTACCTGCTGCGGCGCATGGGCCGGTCGATTCCGGACGCGCGGGAGATCGTCCGC AAGCTGGACGAGGCCGGCGATGGTGAGCTGAAGCCGGTCACGCGCGTGCTTGCCCGGCAGATTCTTGAGGGCGATAGTCA AAATCTTGATCTTTTCGAGTGA
Upstream 100 bases:
>100_bases CCGGCCTGCCCTACGTCTATCTCGGCTACTGGGTCCGGGGCTCGGAGAAGATGGACTACAAGGTCCGCTTCTCGCCCATC GAGCTGCTCAAGGCCGAGGG
Downstream 100 bases:
>100_bases AGACTGGCCACCCACATGAGGCTGGCCAACAACCTCGGAGTCCCGGAGCGGTCCTGATGACCTATGTCGCGCCCCTCGCC TCGCAGTCCGCGAACGACGG
Product: DnaA-related protein
Products: NA
Alternate protein names: DNAA-Related Protein; DNAA-Like Protein; Regulatory Inactivation Of DNAA Hda Protein; Chromosomal Replication Initiator Protein DNAA; Chromosomal Replication Initiator; DNA Replication Initiation ATPase; Chromosomal Replication Initiator DNAa; DNA Replication Initiation ATPase Protein; DNAA-Like Protein Hda
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MDADVLARPAAQGRTSGAVNGGDRRPAAVARGPAVLLDGARGHLPLRTRRMARQLRLRLGRPAAYSRDEFAVGPSNAQAV ALLDAWPAWHGRALALVGPEGSGKTHLARAWAQAAGAVVLDREDPDLRQADGRPALLEDVDQGVPGEALFHLINLAAREG GGLLLTARTRPAAWPAALPDLRSRLNALAVAEIEPPDDAVLEGVLRKFFRDRNIRPPEEVYPYLLRRMGRSIPDAREIVR KLDEAGDGELKPVTRVLARQILEGDSQNLDLFE
Sequences:
>Translated_273_residues MDADVLARPAAQGRTSGAVNGGDRRPAAVARGPAVLLDGARGHLPLRTRRMARQLRLRLGRPAAYSRDEFAVGPSNAQAV ALLDAWPAWHGRALALVGPEGSGKTHLARAWAQAAGAVVLDREDPDLRQADGRPALLEDVDQGVPGEALFHLINLAAREG GGLLLTARTRPAAWPAALPDLRSRLNALAVAEIEPPDDAVLEGVLRKFFRDRNIRPPEEVYPYLLRRMGRSIPDAREIVR KLDEAGDGELKPVTRVLARQILEGDSQNLDLFE >Mature_273_residues MDADVLARPAAQGRTSGAVNGGDRRPAAVARGPAVLLDGARGHLPLRTRRMARQLRLRLGRPAAYSRDEFAVGPSNAQAV ALLDAWPAWHGRALALVGPEGSGKTHLARAWAQAAGAVVLDREDPDLRQADGRPALLEDVDQGVPGEALFHLINLAAREG GGLLLTARTRPAAWPAALPDLRSRLNALAVAEIEPPDDAVLEGVLRKFFRDRNIRPPEEVYPYLLRRMGRSIPDAREIVR KLDEAGDGELKPVTRVLARQILEGDSQNLDLFE
Specific function: Unknown
COG id: COG0593
COG function: function code L; ATPase involved in DNA replication initiation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29562; Mature: 29562
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDADVLARPAAQGRTSGAVNGGDRRPAAVARGPAVLLDGARGHLPLRTRRMARQLRLRLG CCCHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCC RPAAYSRDEFAVGPSNAQAVALLDAWPAWHGRALALVGPEGSGKTHLARAWAQAAGAVVL CCCCCCCCCCEECCCCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCEEEE DREDPDLRQADGRPALLEDVDQGVPGEALFHLINLAAREGGGLLLTARTRPAAWPAALPD ECCCCCHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHH LRSRLNALAVAEIEPPDDAVLEGVLRKFFRDRNIRPPEEVYPYLLRRMGRSIPDAREIVR HHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH KLDEAGDGELKPVTRVLARQILEGDSQNLDLFE HHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDADVLARPAAQGRTSGAVNGGDRRPAAVARGPAVLLDGARGHLPLRTRRMARQLRLRLG CCCHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCC RPAAYSRDEFAVGPSNAQAVALLDAWPAWHGRALALVGPEGSGKTHLARAWAQAAGAVVL CCCCCCCCCCEECCCCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCEEEE DREDPDLRQADGRPALLEDVDQGVPGEALFHLINLAAREGGGLLLTARTRPAAWPAALPD ECCCCCHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHH LRSRLNALAVAEIEPPDDAVLEGVLRKFFRDRNIRPPEEVYPYLLRRMGRSIPDAREIVR HHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH KLDEAGDGELKPVTRVLARQILEGDSQNLDLFE HHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA