| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105144
Identifier: 197105144
GI number: 197105144
Start: 1885834
End: 1886502
Strand: Reverse
Name: 197105144
Synonym: PHZ_c1681
Alternate gene names: NA
Gene position: 1886502-1885834 (Counterclockwise)
Preceding gene: 197105147
Following gene: 197105143
Centisome position: 47.21
GC content: 70.55
Gene sequence:
>669_bases ATGACCCTGAGCTACGACCTCTACTGGTCGTTCCGGTCGCCGTACTCGTACATGGTGACGCCGCGGCTGCTGGAGCTCGA GACCACGCACGACGTCCGCTGCAATGTCCGGCCGGTCTATCCGCTGGCGGTGCGCACGCCCGAGTTCTTCGAACAGCAGG ACCCGCTCTGGCTGCGCTACTTCATGGTCGACGTGTTCCGCGAGGCGGCGTTCCGCGGCCTGCCGTTCCGCTGGCCCCGG CCCGACCCGGTGCAGCGCAACGAGGCGCACGGCTATCGCATCCCCCAGCCCTACATCCATCGCCTGACGCACTTGGGCGT CGCGGCGGCCGAGCGGGGGCGGGGCCTGCCGTTTCTGGCCGAGGCCTCCCACGTGATCTGGAGCGGCGAGGTGGAGGGCT GGCACGAGGGGGATCACCTCGCCCGCGCCGCCGAACGGGCTGGCCTCGACTGGGCCGAGATGTCCGCCGCGGTGGACGCC GATCCCGACCGCTTCCGGCAGATCGTGGATACGAACCAGACGGACCAGCGCGAGGCCGGCCACTGGGGCGTGCCGATGAT GGTCTTCGGCGGCGAGCCGTTCTTCGGCCAGGACCGGTTCGACCAGATGGTCTGGCGGATGCGCCAGCAGGGCCTTCGGC CCCGGGCCGCTCCCCCAACGGCAGATTGA
Upstream 100 bases:
>100_bases AGGGGAGCGCGGGTCATGGCCGGGCTTTGGACCCTGAAGGCCCCGGAAGGCAAGACCCTCCCGCCGTGCTAAGGCGACGC TCAAAAGGGGAGGCAAGAAC
Downstream 100 bases:
>100_bases CACCACGTCATGGGCGGGCGAACTCCCCGCCCATGGACTTCAACCTGACGGAAGATCAGCGGGCGATCGAGGACGCGGCG CGCGCCTTCGCCGCCGCTGA
Product: 2-hydroxychromene-2-carboxylate dehydrogenase
Products: NA
Alternate protein names: 2-Hydroxychromene-2-Carboxylate Isomerase; Dsba Oxidoreductase; 2-Hydroxychromene-2-Carboxylate Dehydrogenase; DSBA-Like Thioredoxin Domain Protein
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MTLSYDLYWSFRSPYSYMVTPRLLELETTHDVRCNVRPVYPLAVRTPEFFEQQDPLWLRYFMVDVFREAAFRGLPFRWPR PDPVQRNEAHGYRIPQPYIHRLTHLGVAAAERGRGLPFLAEASHVIWSGEVEGWHEGDHLARAAERAGLDWAEMSAAVDA DPDRFRQIVDTNQTDQREAGHWGVPMMVFGGEPFFGQDRFDQMVWRMRQQGLRPRAAPPTAD
Sequences:
>Translated_222_residues MTLSYDLYWSFRSPYSYMVTPRLLELETTHDVRCNVRPVYPLAVRTPEFFEQQDPLWLRYFMVDVFREAAFRGLPFRWPR PDPVQRNEAHGYRIPQPYIHRLTHLGVAAAERGRGLPFLAEASHVIWSGEVEGWHEGDHLARAAERAGLDWAEMSAAVDA DPDRFRQIVDTNQTDQREAGHWGVPMMVFGGEPFFGQDRFDQMVWRMRQQGLRPRAAPPTAD >Mature_221_residues TLSYDLYWSFRSPYSYMVTPRLLELETTHDVRCNVRPVYPLAVRTPEFFEQQDPLWLRYFMVDVFREAAFRGLPFRWPRP DPVQRNEAHGYRIPQPYIHRLTHLGVAAAERGRGLPFLAEASHVIWSGEVEGWHEGDHLARAAERAGLDWAEMSAAVDAD PDRFRQIVDTNQTDQREAGHWGVPMMVFGGEPFFGQDRFDQMVWRMRQQGLRPRAAPPTAD
Specific function: Unknown
COG id: COG3917
COG function: function code Q; 2-hydroxychromene-2-carboxylate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25858; Mature: 25727
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSYDLYWSFRSPYSYMVTPRLLELETTHDVRCNVRPVYPLAVRTPEFFEQQDPLWLRY CEEEEEEEEEECCCCEEECCCEEEEEECCCCCEECCEECCEEEECCHHHHCCCCCHHHHH FMVDVFREAAFRGLPFRWPRPDPVQRNEAHGYRIPQPYIHRLTHLGVAAAERGRGLPFLA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC EASHVIWSGEVEGWHEGDHLARAAERAGLDWAEMSAAVDADPDRFRQIVDTNQTDQREAG CCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCC HWGVPMMVFGGEPFFGQDRFDQMVWRMRQQGLRPRAAPPTAD CCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TLSYDLYWSFRSPYSYMVTPRLLELETTHDVRCNVRPVYPLAVRTPEFFEQQDPLWLRY EEEEEEEEEECCCCEEECCCEEEEEECCCCCEECCEECCEEEECCHHHHCCCCCHHHHH FMVDVFREAAFRGLPFRWPRPDPVQRNEAHGYRIPQPYIHRLTHLGVAAAERGRGLPFLA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC EASHVIWSGEVEGWHEGDHLARAAERAGLDWAEMSAAVDADPDRFRQIVDTNQTDQREAG CCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCC HWGVPMMVFGGEPFFGQDRFDQMVWRMRQQGLRPRAAPPTAD CCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA