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The map label for this gene is recJ [H]

Identifier: 197105103

GI number: 197105103

Start: 1847178

End: 1848974

Strand: Reverse

Name: recJ [H]

Synonym: PHZ_c1640

Alternate gene names: 197105103

Gene position: 1848974-1847178 (Counterclockwise)

Preceding gene: 197105105

Following gene: 197105102

Centisome position: 46.27

GC content: 74.35

Gene sequence:

>1797_bases
TTGGCGGACGGCTCCAGCCACCCCGGATATCTCGGCGTCACCCGCTCGCTCTCGGGCCGGCGGTGGCGCGAGCGCGCCGC
GTGCCCGGACCTGACCCGGCGCCACCAGCTCTCGCTGGGATTGTCCGAGCCCCTGGCCCGCGCCTTGGCGTCCCGCGGCG
TGGGGGAGGGGGAAGGGGAAACCTTCCTCAATCCGACGCTGAAGGCGCTGTTCCCCGACCCGTCCTGCTTCTCCGACATG
GATCGGGCGGCCGAGATCCTGGTGGACGCCCTGGAGAACAGGCGCCGGATCGTGGTCTTCGCCGACTACGACGTGGACGG
CGCCTCCTCGGCGGCGCTGCTCGTGCGCTGGTTCCGGGCCATGGGCCTGGAGATCGCCATCTACGTCCCCGACCGGCTGA
CCGAGGGCTACGGCCCGTCGCCAGCCGCCTTCCGCCGCCTGAAGGACGAGGGCGCCGAGCTGGTGGTCACCGTGGACTGC
GGCGCAGCCGCGCACGACGCCCTGGCCTGTGCGGGCGAGATCGGCCTGCCCGTGGTGGTGATCGACCACCACCTGATGCG
GCCGGGCGAGATCCCGCCCATCGCCGCGCTGGTCAACCCGAACCGCCCGGACTGCGTCTCGGGCCAGGGCCACCTGGCCG
CCGCGGGCGTCACCTTCGTCCTGCTCGCGGCTCTGAACCGCGAGGCGCGCCGCCGCGGCCTCGCGCCCGAGCCCGACCTC
CGCGCCTGGCTCGACCTCGCCGCCATGGGCGCCATCTGCGACGTCACCCGCCTGACGGGGTTCAACCGCGCCCTGGCGGC
CCAGGGGCTGAAGGTGATGTCCGGCTGGAAGAACCCGGGCCTGGCCGCCCTGATGCAGGTGGCCAAAGGGCAGGGGGCGG
CCTCGACCTTCCACGTGGGCTTCCTGCTGGGCCCGCGGATCAACGCCGGCGGGCGCATCGGGCGCTCGGACCTGGGCGCG
CGCCTGCTCTCCACCGACGATCCTGACGAGGCCGCGGCCCTGGCCGCCGAGCTGGACGGCCTGAACGCCTCGCGCAAGGA
GGTGGAGGCCCAGGTGATGGAGGCCGCCATCCGCCACATCGAGCAGGAGAGCAACGCCGCCGACGCGCCGTGCCTGCTGG
TGGCGCAGGACGACTGGCATCCGGGGGTGATCGGCATCGTCGCCGGGCGCCTGCGCGAACGCTACCGCAAGCCGTGCATC
GTCGTTGGGATCGACCGGGCCGCCAACGTCGGCAAGGGCTCGGGCCGCTCGCAGCCGGGGGTGAACCTCGGCCGCGCGGT
GCAGGCGGCGTTCGAGGAAGGCCTGCTGCTGGCCGGCGGAGGCCACGCCATGGCCGCGGGGCTGTCCGTGCGGCCCGATG
CGATCCCCGAGCTGCGGGACTTCCTCAACGCCCGCCTGGCCGACGAGCAGGCCCAGGCCGCCGCCGAGGACGGCCTGGAG
ATCGACGCCCTGGTGACCGCCCGCGGCTGCGACCGGGCGCTCTGGCGCGACTTCCAGCGGCTGGCGCCGTTCGGCCCCGG
CAACCCCGAGCCGACCTTCGCGGCCGCCGACATGCGGATCGAACGGCCGATGGCGCTGAAGGGCGGCCATGTCCGTTGCA
CGCTCACCGATTCGTCGGGCGGGAAGCTCAAGGCGGTGGCCTGGCGCATGGCCGACACCGAGGCCGGCCGACGGCTGCTG
CAGGAAGGCGGGGCGGTCCACGTGGCCGGCCGCCTGAAGCCCGACGACTGGCAGGGCCGCGAGGGCGTGGAGCTCGAGAT
CGAGGACGTCGCCGACCCCCGGGCGGTCCTCGACTGA

Upstream 100 bases:

>100_bases
CCATCTGCTTTGGACGCAGGCCCGATGTAGCTGCGACGGTCAGGCGGCTGGCGACTCACGGCCGGCCGCCCGATAGTGCG
CCTTCGGAGGGCTCTCGAAC

Downstream 100 bases:

>100_bases
GGCGTCCGCGGGGCCTCTCCGGCCCTGGAAAAGCCGCCTGCGCCTTCGCCGAACGCCGCTCCGGAGAAATTCGTCCGGTG
GGCCTTGCAAGGGTTGGGGA

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 598; Mature: 597

Protein sequence:

>598_residues
MADGSSHPGYLGVTRSLSGRRWRERAACPDLTRRHQLSLGLSEPLARALASRGVGEGEGETFLNPTLKALFPDPSCFSDM
DRAAEILVDALENRRRIVVFADYDVDGASSAALLVRWFRAMGLEIAIYVPDRLTEGYGPSPAAFRRLKDEGAELVVTVDC
GAAAHDALACAGEIGLPVVVIDHHLMRPGEIPPIAALVNPNRPDCVSGQGHLAAAGVTFVLLAALNREARRRGLAPEPDL
RAWLDLAAMGAICDVTRLTGFNRALAAQGLKVMSGWKNPGLAALMQVAKGQGAASTFHVGFLLGPRINAGGRIGRSDLGA
RLLSTDDPDEAAALAAELDGLNASRKEVEAQVMEAAIRHIEQESNAADAPCLLVAQDDWHPGVIGIVAGRLRERYRKPCI
VVGIDRAANVGKGSGRSQPGVNLGRAVQAAFEEGLLLAGGGHAMAAGLSVRPDAIPELRDFLNARLADEQAQAAAEDGLE
IDALVTARGCDRALWRDFQRLAPFGPGNPEPTFAAADMRIERPMALKGGHVRCTLTDSSGGKLKAVAWRMADTEAGRRLL
QEGGAVHVAGRLKPDDWQGREGVELEIEDVADPRAVLD

Sequences:

>Translated_598_residues
MADGSSHPGYLGVTRSLSGRRWRERAACPDLTRRHQLSLGLSEPLARALASRGVGEGEGETFLNPTLKALFPDPSCFSDM
DRAAEILVDALENRRRIVVFADYDVDGASSAALLVRWFRAMGLEIAIYVPDRLTEGYGPSPAAFRRLKDEGAELVVTVDC
GAAAHDALACAGEIGLPVVVIDHHLMRPGEIPPIAALVNPNRPDCVSGQGHLAAAGVTFVLLAALNREARRRGLAPEPDL
RAWLDLAAMGAICDVTRLTGFNRALAAQGLKVMSGWKNPGLAALMQVAKGQGAASTFHVGFLLGPRINAGGRIGRSDLGA
RLLSTDDPDEAAALAAELDGLNASRKEVEAQVMEAAIRHIEQESNAADAPCLLVAQDDWHPGVIGIVAGRLRERYRKPCI
VVGIDRAANVGKGSGRSQPGVNLGRAVQAAFEEGLLLAGGGHAMAAGLSVRPDAIPELRDFLNARLADEQAQAAAEDGLE
IDALVTARGCDRALWRDFQRLAPFGPGNPEPTFAAADMRIERPMALKGGHVRCTLTDSSGGKLKAVAWRMADTEAGRRLL
QEGGAVHVAGRLKPDDWQGREGVELEIEDVADPRAVLD
>Mature_597_residues
ADGSSHPGYLGVTRSLSGRRWRERAACPDLTRRHQLSLGLSEPLARALASRGVGEGEGETFLNPTLKALFPDPSCFSDMD
RAAEILVDALENRRRIVVFADYDVDGASSAALLVRWFRAMGLEIAIYVPDRLTEGYGPSPAAFRRLKDEGAELVVTVDCG
AAAHDALACAGEIGLPVVVIDHHLMRPGEIPPIAALVNPNRPDCVSGQGHLAAAGVTFVLLAALNREARRRGLAPEPDLR
AWLDLAAMGAICDVTRLTGFNRALAAQGLKVMSGWKNPGLAALMQVAKGQGAASTFHVGFLLGPRINAGGRIGRSDLGAR
LLSTDDPDEAAALAAELDGLNASRKEVEAQVMEAAIRHIEQESNAADAPCLLVAQDDWHPGVIGIVAGRLRERYRKPCIV
VGIDRAANVGKGSGRSQPGVNLGRAVQAAFEEGLLLAGGGHAMAAGLSVRPDAIPELRDFLNARLADEQAQAAAEDGLEI
DALVTARGCDRALWRDFQRLAPFGPGNPEPTFAAADMRIERPMALKGGHVRCTLTDSSGGKLKAVAWRMADTEAGRRLLQ
EGGAVHVAGRLKPDDWQGREGVELEIEDVADPRAVLD

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=576, Percent_Identity=33.5069444444444, Blast_Score=245, Evalue=7e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 63466; Mature: 63335

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADGSSHPGYLGVTRSLSGRRWRERAACPDLTRRHQLSLGLSEPLARALASRGVGEGEGE
CCCCCCCCCEEEEECCCCCCHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
TFLNPTLKALFPDPSCFSDMDRAAEILVDALENRRRIVVFADYDVDGASSAALLVRWFRA
CCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHH
MGLEIAIYVPDRLTEGYGPSPAAFRRLKDEGAELVVTVDCGAAAHDALACAGEIGLPVVV
CCCEEEEEECHHHCCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEE
IDHHLMRPGEIPPIAALVNPNRPDCVSGQGHLAAAGVTFVLLAALNREARRRGLAPEPDL
ECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCHH
RAWLDLAAMGAICDVTRLTGFNRALAAQGLKVMSGWKNPGLAALMQVAKGQGAASTFHVG
HHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEE
FLLGPRINAGGRIGRSDLGARLLSTDDPDEAAALAAELDGLNASRKEVEAQVMEAAIRHI
EEECCCCCCCCCCCCHHHCCEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
EQESNAADAPCLLVAQDDWHPGVIGIVAGRLRERYRKPCIVVGIDRAANVGKGSGRSQPG
HHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCC
VNLGRAVQAAFEEGLLLAGGGHAMAAGLSVRPDAIPELRDFLNARLADEQAQAAAEDGLE
CCHHHHHHHHHHCCEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCE
IDALVTARGCDRALWRDFQRLAPFGPGNPEPTFAAADMRIERPMALKGGHVRCTLTDSSG
EEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEECCEEECCCCEECCCEEEEEEECCCC
GKLKAVAWRMADTEAGRRLLQEGGAVHVAGRLKPDDWQGREGVELEIEDVADPRAVLD
CEEEEEEEEHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHCC
>Mature Secondary Structure 
ADGSSHPGYLGVTRSLSGRRWRERAACPDLTRRHQLSLGLSEPLARALASRGVGEGEGE
CCCCCCCCEEEEECCCCCCHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
TFLNPTLKALFPDPSCFSDMDRAAEILVDALENRRRIVVFADYDVDGASSAALLVRWFRA
CCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHH
MGLEIAIYVPDRLTEGYGPSPAAFRRLKDEGAELVVTVDCGAAAHDALACAGEIGLPVVV
CCCEEEEEECHHHCCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEE
IDHHLMRPGEIPPIAALVNPNRPDCVSGQGHLAAAGVTFVLLAALNREARRRGLAPEPDL
ECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCHH
RAWLDLAAMGAICDVTRLTGFNRALAAQGLKVMSGWKNPGLAALMQVAKGQGAASTFHVG
HHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEE
FLLGPRINAGGRIGRSDLGARLLSTDDPDEAAALAAELDGLNASRKEVEAQVMEAAIRHI
EEECCCCCCCCCCCCHHHCCEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
EQESNAADAPCLLVAQDDWHPGVIGIVAGRLRERYRKPCIVVGIDRAANVGKGSGRSQPG
HHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCC
VNLGRAVQAAFEEGLLLAGGGHAMAAGLSVRPDAIPELRDFLNARLADEQAQAAAEDGLE
CCHHHHHHHHHHCCEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCE
IDALVTARGCDRALWRDFQRLAPFGPGNPEPTFAAADMRIERPMALKGGHVRCTLTDSSG
EEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEECCEEECCCCEECCCEEEEEEECCCC
GKLKAVAWRMADTEAGRRLLQEGGAVHVAGRLKPDDWQGREGVELEIEDVADPRAVLD
CEEEEEEEEHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]