| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105074
Identifier: 197105074
GI number: 197105074
Start: 1814233
End: 1814727
Strand: Reverse
Name: 197105074
Synonym: PHZ_c1611
Alternate gene names: NA
Gene position: 1814727-1814233 (Counterclockwise)
Preceding gene: 197105076
Following gene: 197105073
Centisome position: 45.41
GC content: 69.9
Gene sequence:
>495_bases GTGGCCGTGCGCCGCTTCATCGACGATGTCCGGGGCGGAGCCGCGATCGAGTTCGCGCTGATCTCGCCTCTGCTCATCTT CCTGATCTTCGCCACCATCGAGATGGCGGTGATGGCGATGATGTCGGCCGGCCTCGACAACGCCGTGGCCACGACGGCGC GCATGATCCGCACGGGCCAGGACGACGGCCCGGCCAGCGCGGCCGACTTCGAGGCCCTGATCTGCCGCAACCTCGTCTCG GACAACGCCGGCTGCCGCGACAAGCTGCAGGTGAGCGTCCAGCGTTTCAGCCGCTTCGCCGAGGCGGCCGCCAGCGCCGA CGCGCCGCCGGACGGGGCGTTCAACAAGGGCGTCGCGGGCGACATCATCCTCGTGCGCGCCACCTACCGCTGGCCGATGA TCGTGCCGAACTTCACCCTCTCGGGCGGCGCGCCGCGGCCGGGCGAGGTGATGCTCGACGCCCGCACGGTGTTCAAGAAC GAGCCCTACGAATGA
Upstream 100 bases:
>100_bases GGGCGTGGTAAAAATCGAGACACCATAGGCGCCTGGGACTTAACCCGGCTTTTGCCCTGCGCGCGCATCCTGCGGGTCTG CTTCAAGGAGGAGGCGACCC
Downstream 100 bases:
>100_bases GGCGCTTCCTGACCCGCTGGCGGGCCTGCGCGCGCGGCGGCGCGGCCGTGGAGTTCGGCCTGATCCTGCCGTTCCTGTTC GTCATGCACATCACGGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: TadE-Like Protein; TadG-Like Pilus Assembly Protein; Transmembrane Protein; Signal Peptide; Flp Pilus Assembly Protein TadG; TadE-Like; Tade Family Protein
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MAVRRFIDDVRGGAAIEFALISPLLIFLIFATIEMAVMAMMSAGLDNAVATTARMIRTGQDDGPASAADFEALICRNLVS DNAGCRDKLQVSVQRFSRFAEAAASADAPPDGAFNKGVAGDIILVRATYRWPMIVPNFTLSGGAPRPGEVMLDARTVFKN EPYE
Sequences:
>Translated_164_residues MAVRRFIDDVRGGAAIEFALISPLLIFLIFATIEMAVMAMMSAGLDNAVATTARMIRTGQDDGPASAADFEALICRNLVS DNAGCRDKLQVSVQRFSRFAEAAASADAPPDGAFNKGVAGDIILVRATYRWPMIVPNFTLSGGAPRPGEVMLDARTVFKN EPYE >Mature_163_residues AVRRFIDDVRGGAAIEFALISPLLIFLIFATIEMAVMAMMSAGLDNAVATTARMIRTGQDDGPASAADFEALICRNLVSD NAGCRDKLQVSVQRFSRFAEAAASADAPPDGAFNKGVAGDIILVRATYRWPMIVPNFTLSGGAPRPGEVMLDARTVFKNE PYE
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17588; Mature: 17457
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVRRFIDDVRGGAAIEFALISPLLIFLIFATIEMAVMAMMSAGLDNAVATTARMIRTGQ CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC DDGPASAADFEALICRNLVSDNAGCRDKLQVSVQRFSRFAEAAASADAPPDGAFNKGVAG CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC DIILVRATYRWPMIVPNFTLSGGAPRPGEVMLDARTVFKNEPYE CEEEEEEECCCCEEECCEEECCCCCCCCCEEEHHHHHHCCCCCC >Mature Secondary Structure AVRRFIDDVRGGAAIEFALISPLLIFLIFATIEMAVMAMMSAGLDNAVATTARMIRTGQ CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC DDGPASAADFEALICRNLVSDNAGCRDKLQVSVQRFSRFAEAAASADAPPDGAFNKGVAG CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC DIILVRATYRWPMIVPNFTLSGGAPRPGEVMLDARTVFKNEPYE CEEEEEEECCCCEEECCEEECCCCCCCCCEEEHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA