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The map label for this gene is tolB [H]

Identifier: 197105058

GI number: 197105058

Start: 1798601

End: 1801168

Strand: Reverse

Name: tolB [H]

Synonym: PHZ_c1595

Alternate gene names: 197105058

Gene position: 1801168-1798601 (Counterclockwise)

Preceding gene: 197105059

Following gene: 197105053

Centisome position: 45.07

GC content: 77.38

Gene sequence:

>2568_bases
GTGCAGCACCGCGAGCCGGCTCGAGCCCACCTCCGCCACCGCCCGGGCCACGGCGTCCCGACGGCACGCCCTGAACGCCT
CGCGCACGAGGTCCGGCGTCGTGCGCCAGGCCGAGTGGTTGCGCGGATCGCCGCCGCAGGCCGTCCGGGCCGCCGCCTCC
AGCCGCGTCAGCAGGTCCCGCGCGCCGGCCTCGCCGGCCAGCGCCGCCGGGTCGTAGCTCACCGCGACCGCGCCCACCTT
CTCGGTCCCCACCCTCACCTCCGCGGCGGTCGCGGCGGGAGACCCAGCCATCGTCGCGGCCATCGCCGCAGCCAGGGCGC
AGATCGCCGTCGTCATCCGAGCTTGCATGTCGTCCTCCGGGTTTTCGTCCGCCCGACGCCTGCGCCCAGGAGAGCCCCAT
GGGTCCCGAGGCCGCATTTGTCGGGAACGCTGTTTTGTCGGAGACTTGGCGGCCGACGCGCCTGGGTCCGGACCCGATCG
TTTGCCGATGATTTGCCGATGAACGAGCACACCAGCATCCGGCCGCCCCGCGAGATCGTGCTGGCCTACGAGCCGGCCTT
CCGGCTGGCGGCCACCGAGGTGCGCCCGGCCGAACTGGAGGTCGAGGGCCCGGCCGGCGTCCGCCCGCTGGAGCCGCGGG
TGATGAAGGTTCTCGTCGCGCTCCACCGCAGTCTCGGCGCGGCGGTCAGCCGCGAGGCCCTGGGCCAGCAGTGCTGGGGC
GGGCGGATCGTCTCGGAGGACGCCCTGACCCGCTGCGTGGTCCAGCTCCGCAAGGCCCTGGCGGCCGACCCCGCCATCGT
GGTCGAGACCATCCCCACCGTCGGCTACCGGCTCCAGGCCGACGGCGGGGCTCCCACCCGCGCCGTGCGGCCGCCCCGGC
GCGCCGCCCTCATCGCCGCCGCCGTCGCCGCGCTCGCCGTCATGGCCGCGCTGGGCGGCGCCTGGCTGTGGAGCCAGCGG
CCGCAGGCGTGGGCCGCCAGCGACTTCCGCCCCCTGACCTCCGAGCCGGGCTTCAAGACCTTCCCGGCCCTGTCGCCGGA
CGGGCGGCAGGTGGCCTACGCCCACGCCGCCCTGCCCTTCGCCCCGCGCGACATCCACCTGCGCGCGGTCGCCGGCGGCG
AGGCGGCGGCGGTCACCTCGGGGCCGGACGACGACTTCGCCCCGGCCTGGGCGCCGGACGGCGACCGGATCGCCTTCCTG
CGCCGCAGCCCGGACGGCGGCTGTGCGGTGATGGTCGCCATCGTGCCCCGCGGCGGAGAGCGGCGGCTGGCCCCCTGCCG
CGAGGCCGGCGCCCATCCGACCTGGCTGGACGCGCGCACGCTGGTGGTCGCCGACACGCCGGCCGGCGGCGGCCTGCCGC
GCCTCTCCGCCATCGACGCCACGACCGGCGAGGTCCGCGCCCTGACCGCCCCGCCGCCGGACACGCTGGGCGACAACGAG
CCCCAGGCCTCGCCCGACGGGCGGCAGGTCGCCTTCCGCCGCACCCTGCGCTTCGGCGCCGACGAGATCGTGGTGCTCGA
CGTCCGCACGGGGCGGGAGCGCACCCTCACCCGCGACGGCTGGAAGGCGGCCGGCTACGTCTGGTCGCCCGACGGACGGA
ATCTCCTCTTCGCCTCCAACCGCGGCGGCGGCCTCGGCCTCTGGCGCCTGGACGCGCGCCGGCCGGCCGAGCCCGAGCAG
GTCAGCCTGGGCCTGGGGGTCGTCAGCTTCCTGCACATGTCGGCCGACCGCACCGGCCAGGCGGTGGTCGAGATCGCCCG
CCCCCGCTCGGGCCTCGTCCGCCTCGGCCCGTCAGGCGCCCCCGAGGCGCGGATCGTCACCGCCTCCAACGACTGGGACC
CGGTCACGGGGCCGGACGGCGCCGTCGCCCACATCTCGGACCGGGCCGGCGCGCCCGACCTGTGGATCTCGGCGCCCGGC
GGCGGCGCGACCCGCCTCACCGAAGGGCTCGGCAGCTATGTGAGCAGCCCCGCCTGGTCGGGCGACGGCCGCTCGCTCGC
CTTCATCGCCGTGATCGGACGCCAGGCCGACATCTTCACCGTGGGCCGCGACGGCTCGCGGCTCCTGCGGCTGACGGACG
ACGGCCGCGACAAGCGCAGTCCGGTGTTCGGCCCCCGCGGCCGGGTCTACTACGTCGAGCGGCGGGGTCAGGCCTGGCGG
CTGATGACGGTGGATCCCGCAGCGCCCGGCGCCGCGCCGGCGCCGGTCCCCGGCGGCCAGGGCTGGCGCTCGGTCCAGGC
CGCCCCGTCGGGCGCGCTCTACGGCCAGCGCCAGGGCGCCGAAACGATCGGACGCCTCGACGGCGGCGCCTGGCGGCCGG
CGGCCGAGGTCTGGCCCTACGAGTCCTGGGCTGCTTCCGACGACGGAGTCTTCATCCTCGATACGTCGGCCCGGCCCCGG
CCGGCGCTGTGGTTCCAGCCCTGGAGCGCCCCCCGTCGCCGCCTGCCCGATCCCGGGCCGATGGCGGCCCGCGTCACCCC
CTCGGCGCTCGGCGGCGCCACGCTGGGCGAGGCCCTCACCGAGGCGGTGGACCTCGGCCTCATGCGCCTGGGCCCGGCGC
GCCGGTAG

Upstream 100 bases:

>100_bases
AGGGCCTGAAGGGCGGCCTGAGCCGGGACGTGAGGCGGGGACCTGAGGCGGCCCCCGCCCCACCTCCGCCTCACCGCGCC
CGCCCGTCGCGCCCGCCGGC

Downstream 100 bases:

>100_bases
CGGGCGCCTAGTACCGGACGTAGGCGCGCACCGGGAACGTCGCCCCGCCCCGCCACGCGATGGGCGCGGCGTGCAGCCGC
CCGCCCTCGGGCTGTAACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 855; Mature: 855

Protein sequence:

>855_residues
MQHREPARAHLRHRPGHGVPTARPERLAHEVRRRAPGRVVARIAAAGRPGRRLQPRQQVPRAGLAGQRRRVVAHRDRAHL
LGPHPHLRGGRGGRPSHRRGHRRSQGADRRRHPSLHVVLRVFVRPTPAPRRAPWVPRPHLSGTLFCRRLGGRRAWVRTRS
FADDLPMNEHTSIRPPREIVLAYEPAFRLAATEVRPAELEVEGPAGVRPLEPRVMKVLVALHRSLGAAVSREALGQQCWG
GRIVSEDALTRCVVQLRKALAADPAIVVETIPTVGYRLQADGGAPTRAVRPPRRAALIAAAVAALAVMAALGGAWLWSQR
PQAWAASDFRPLTSEPGFKTFPALSPDGRQVAYAHAALPFAPRDIHLRAVAGGEAAAVTSGPDDDFAPAWAPDGDRIAFL
RRSPDGGCAVMVAIVPRGGERRLAPCREAGAHPTWLDARTLVVADTPAGGGLPRLSAIDATTGEVRALTAPPPDTLGDNE
PQASPDGRQVAFRRTLRFGADEIVVLDVRTGRERTLTRDGWKAAGYVWSPDGRNLLFASNRGGGLGLWRLDARRPAEPEQ
VSLGLGVVSFLHMSADRTGQAVVEIARPRSGLVRLGPSGAPEARIVTASNDWDPVTGPDGAVAHISDRAGAPDLWISAPG
GGATRLTEGLGSYVSSPAWSGDGRSLAFIAVIGRQADIFTVGRDGSRLLRLTDDGRDKRSPVFGPRGRVYYVERRGQAWR
LMTVDPAAPGAAPAPVPGGQGWRSVQAAPSGALYGQRQGAETIGRLDGGAWRPAAEVWPYESWAASDDGVFILDTSARPR
PALWFQPWSAPRRRLPDPGPMAARVTPSALGGATLGEALTEAVDLGLMRLGPARR

Sequences:

>Translated_855_residues
MQHREPARAHLRHRPGHGVPTARPERLAHEVRRRAPGRVVARIAAAGRPGRRLQPRQQVPRAGLAGQRRRVVAHRDRAHL
LGPHPHLRGGRGGRPSHRRGHRRSQGADRRRHPSLHVVLRVFVRPTPAPRRAPWVPRPHLSGTLFCRRLGGRRAWVRTRS
FADDLPMNEHTSIRPPREIVLAYEPAFRLAATEVRPAELEVEGPAGVRPLEPRVMKVLVALHRSLGAAVSREALGQQCWG
GRIVSEDALTRCVVQLRKALAADPAIVVETIPTVGYRLQADGGAPTRAVRPPRRAALIAAAVAALAVMAALGGAWLWSQR
PQAWAASDFRPLTSEPGFKTFPALSPDGRQVAYAHAALPFAPRDIHLRAVAGGEAAAVTSGPDDDFAPAWAPDGDRIAFL
RRSPDGGCAVMVAIVPRGGERRLAPCREAGAHPTWLDARTLVVADTPAGGGLPRLSAIDATTGEVRALTAPPPDTLGDNE
PQASPDGRQVAFRRTLRFGADEIVVLDVRTGRERTLTRDGWKAAGYVWSPDGRNLLFASNRGGGLGLWRLDARRPAEPEQ
VSLGLGVVSFLHMSADRTGQAVVEIARPRSGLVRLGPSGAPEARIVTASNDWDPVTGPDGAVAHISDRAGAPDLWISAPG
GGATRLTEGLGSYVSSPAWSGDGRSLAFIAVIGRQADIFTVGRDGSRLLRLTDDGRDKRSPVFGPRGRVYYVERRGQAWR
LMTVDPAAPGAAPAPVPGGQGWRSVQAAPSGALYGQRQGAETIGRLDGGAWRPAAEVWPYESWAASDDGVFILDTSARPR
PALWFQPWSAPRRRLPDPGPMAARVTPSALGGATLGEALTEAVDLGLMRLGPARR
>Mature_855_residues
MQHREPARAHLRHRPGHGVPTARPERLAHEVRRRAPGRVVARIAAAGRPGRRLQPRQQVPRAGLAGQRRRVVAHRDRAHL
LGPHPHLRGGRGGRPSHRRGHRRSQGADRRRHPSLHVVLRVFVRPTPAPRRAPWVPRPHLSGTLFCRRLGGRRAWVRTRS
FADDLPMNEHTSIRPPREIVLAYEPAFRLAATEVRPAELEVEGPAGVRPLEPRVMKVLVALHRSLGAAVSREALGQQCWG
GRIVSEDALTRCVVQLRKALAADPAIVVETIPTVGYRLQADGGAPTRAVRPPRRAALIAAAVAALAVMAALGGAWLWSQR
PQAWAASDFRPLTSEPGFKTFPALSPDGRQVAYAHAALPFAPRDIHLRAVAGGEAAAVTSGPDDDFAPAWAPDGDRIAFL
RRSPDGGCAVMVAIVPRGGERRLAPCREAGAHPTWLDARTLVVADTPAGGGLPRLSAIDATTGEVRALTAPPPDTLGDNE
PQASPDGRQVAFRRTLRFGADEIVVLDVRTGRERTLTRDGWKAAGYVWSPDGRNLLFASNRGGGLGLWRLDARRPAEPEQ
VSLGLGVVSFLHMSADRTGQAVVEIARPRSGLVRLGPSGAPEARIVTASNDWDPVTGPDGAVAHISDRAGAPDLWISAPG
GGATRLTEGLGSYVSSPAWSGDGRSLAFIAVIGRQADIFTVGRDGSRLLRLTDDGRDKRSPVFGPRGRVYYVERRGQAWR
LMTVDPAAPGAAPAPVPGGQGWRSVQAAPSGALYGQRQGAETIGRLDGGAWRPAAEVWPYESWAASDDGVFILDTSARPR
PALWFQPWSAPRRRLPDPGPMAARVTPSALGGATLGEALTEAVDLGLMRLGPARR

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011659
- InterPro:   IPR014167
- InterPro:   IPR007195 [H]

Pfam domain/function: PF07676 PD40; PF04052 TolB_N [H]

EC number: NA

Molecular weight: Translated: 91816; Mature: 91816

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHREPARAHLRHRPGHGVPTARPERLAHEVRRRAPGRVVARIAAAGRPGRRLQPRQQVP
CCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHCC
RAGLAGQRRRVVAHRDRAHLLGPHPHLRGGRGGRPSHRRGHRRSQGADRRRHPSLHVVLR
CCCCCCCHHHHHHCCCCHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHCCCCCEEEEE
VFVRPTPAPRRAPWVPRPHLSGTLFCRRLGGRRAWVRTRSFADDLPMNEHTSIRPPREIV
EEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEHHHHHCCCCCCCCCCCCCHHEE
LAYEPAFRLAATEVRPAELEVEGPAGVRPLEPRVMKVLVALHRSLGAAVSREALGQQCWG
EEECCCCEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GRIVSEDALTRCVVQLRKALAADPAIVVETIPTVGYRLQADGGAPTRAVRPPRRAALIAA
CEEECHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHH
AVAALAVMAALGGAWLWSQRPQAWAASDFRPLTSEPGFKTFPALSPDGRQVAYAHAALPF
HHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
APRDIHLRAVAGGEAAAVTSGPDDDFAPAWAPDGDRIAFLRRSPDGGCAVMVAIVPRGGE
CCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCC
RRLAPCREAGAHPTWLDARTLVVADTPAGGGLPRLSAIDATTGEVRALTAPPPDTLGDNE
CCCCCHHHCCCCCCEECCEEEEEEECCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCC
PQASPDGRQVAFRRTLRFGADEIVVLDVRTGRERTLTRDGWKAAGYVWSPDGRNLLFASN
CCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEECCEEECCCCCEEEEECC
RGGGLGLWRLDARRPAEPEQVSLGLGVVSFLHMSADRTGQAVVEIARPRSGLVRLGPSGA
CCCCEEEEEECCCCCCCHHHEEHHHHHHHHHHHCCCCCCHHHHEECCCCCCEEEECCCCC
PEARIVTASNDWDPVTGPDGAVAHISDRAGAPDLWISAPGGGATRLTEGLGSYVSSPAWS
CCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCC
GDGRSLAFIAVIGRQADIFTVGRDGSRLLRLTDDGRDKRSPVFGPRGRVYYVERRGQAWR
CCCCEEEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEE
LMTVDPAAPGAAPAPVPGGQGWRSVQAAPSGALYGQRQGAETIGRLDGGAWRPAAEVWPY
EEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHCCCC
ESWAASDDGVFILDTSARPRPALWFQPWSAPRRRLPDPGPMAARVTPSALGGATLGEALT
CCCCCCCCCEEEEECCCCCCCEEEECCCCCHHHCCCCCCCCEEEECHHHHCCHHHHHHHH
EAVDLGLMRLGPARR
HHHHHHHHHCCCCCC
>Mature Secondary Structure
MQHREPARAHLRHRPGHGVPTARPERLAHEVRRRAPGRVVARIAAAGRPGRRLQPRQQVP
CCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHCC
RAGLAGQRRRVVAHRDRAHLLGPHPHLRGGRGGRPSHRRGHRRSQGADRRRHPSLHVVLR
CCCCCCCHHHHHHCCCCHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHCCCCCEEEEE
VFVRPTPAPRRAPWVPRPHLSGTLFCRRLGGRRAWVRTRSFADDLPMNEHTSIRPPREIV
EEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEHHHHHCCCCCCCCCCCCCHHEE
LAYEPAFRLAATEVRPAELEVEGPAGVRPLEPRVMKVLVALHRSLGAAVSREALGQQCWG
EEECCCCEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GRIVSEDALTRCVVQLRKALAADPAIVVETIPTVGYRLQADGGAPTRAVRPPRRAALIAA
CEEECHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHH
AVAALAVMAALGGAWLWSQRPQAWAASDFRPLTSEPGFKTFPALSPDGRQVAYAHAALPF
HHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
APRDIHLRAVAGGEAAAVTSGPDDDFAPAWAPDGDRIAFLRRSPDGGCAVMVAIVPRGGE
CCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCC
RRLAPCREAGAHPTWLDARTLVVADTPAGGGLPRLSAIDATTGEVRALTAPPPDTLGDNE
CCCCCHHHCCCCCCEECCEEEEEEECCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCC
PQASPDGRQVAFRRTLRFGADEIVVLDVRTGRERTLTRDGWKAAGYVWSPDGRNLLFASN
CCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEECCEEECCCCCEEEEECC
RGGGLGLWRLDARRPAEPEQVSLGLGVVSFLHMSADRTGQAVVEIARPRSGLVRLGPSGA
CCCCEEEEEECCCCCCCHHHEEHHHHHHHHHHHCCCCCCHHHHEECCCCCCEEEECCCCC
PEARIVTASNDWDPVTGPDGAVAHISDRAGAPDLWISAPGGGATRLTEGLGSYVSSPAWS
CCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCC
GDGRSLAFIAVIGRQADIFTVGRDGSRLLRLTDDGRDKRSPVFGPRGRVYYVERRGQAWR
CCCCEEEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEE
LMTVDPAAPGAAPAPVPGGQGWRSVQAAPSGALYGQRQGAETIGRLDGGAWRPAAEVWPY
EEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHCCCC
ESWAASDDGVFILDTSARPRPALWFQPWSAPRRRLPDPGPMAARVTPSALGGATLGEALT
CCCCCCCCCEEEEECCCCCCCEEEECCCCCHHHCCCCCCCCEEEECHHHHCCHHHHHHHH
EAVDLGLMRLGPARR
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA