| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is bcp [C]
Identifier: 197105011
GI number: 197105011
Start: 1747396
End: 1747938
Strand: Reverse
Name: bcp [C]
Synonym: PHZ_c1548
Alternate gene names: 197105011
Gene position: 1747938-1747396 (Counterclockwise)
Preceding gene: 197105012
Following gene: 197105009
Centisome position: 43.74
GC content: 68.88
Gene sequence:
>543_bases ATGCACCGCCTCGTCGCCGCCGCCGCGCTCTGCGCGGTGATCGCCACCCCCGCCGCAGCCGCCCTCAAGCCCGGGGACAA GGCGCCGGACTTCACGGCCCAGGGCTACCAGGCGGGCAAGCCCCTCACCTTCTCGCTCGCCGAGGCGCGGAAGAAGGGGC CGGTGGTGCTCTACTTCTTCCCGGCGGCCGACACGAAAGGCTGCAACATCGAGGCGAAGATGTTCGCCGACGCCATCCCG CAGTTCCAGGCGGCGGGGGCGACCGTGATCGGCGTGACCGCCGGCAACCTCGACAAGCTGCAGCAGATCTCGTCCGACAC CGACAAGTGCTCGGGCAAGTTCCCGGTGGCCGCCGATCCGGGGGCCAAGATCGCCAAGCAGTACGACGCCGTGCTGGCGA TGAAGCCCGACTGGTCCGACCGGACGTCCTATGTGATCGCGCCCGGCGGCCAGGTGATCCACACCTATTCCAAGCTGGAC CCGTCCGAGCACGTCTCCCAGACCCTCAGCGCCGTCAAAGGCTGGAAGGCGGCGAAGAAGTAG
Upstream 100 bases:
>100_bases GCTGAACGTGGACGACTTCCTCTTCGCATAGCGGCGATCTAGCATCCGGACCGAAGGCTCCGCCGTATCCCTACGGCAGG AGCCAAACCGGGAGATCCAC
Downstream 100 bases:
>100_bases CCGCTCAGGAAGGGGTGGGCCGGGAGTCGGCGTCGCAGCCGAACCTGTCGCAGAGCCGGCGCAGGATCTCGCCCTGCGCC GGCGGCATCAGCTCCTCCGT
Product: peroxiredoxin
Products: Acceptor; H2O; oxidized thioredoxin [C]
Alternate protein names: Bacterioferritin Comigratory Protein; Redoxin Domain-Containing Protein; Thioredoxin Peroxidase; Peroxiredoxin Bacterioferritin Comigratory Protein; Antioxidant AhpC/TSA Family; Redoxin; Alkyl Hydroperoxide Reductase; Antioxidant AhpC/TSA Family Protein; Alkyl Hydroperoxide Reductase/ Thiol Specific; 2-Cys Peroxiredoxin; AhpC/TSA Family
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MHRLVAAAALCAVIATPAAAALKPGDKAPDFTAQGYQAGKPLTFSLAEARKKGPVVLYFFPAADTKGCNIEAKMFADAIP QFQAAGATVIGVTAGNLDKLQQISSDTDKCSGKFPVAADPGAKIAKQYDAVLAMKPDWSDRTSYVIAPGGQVIHTYSKLD PSEHVSQTLSAVKGWKAAKK
Sequences:
>Translated_180_residues MHRLVAAAALCAVIATPAAAALKPGDKAPDFTAQGYQAGKPLTFSLAEARKKGPVVLYFFPAADTKGCNIEAKMFADAIP QFQAAGATVIGVTAGNLDKLQQISSDTDKCSGKFPVAADPGAKIAKQYDAVLAMKPDWSDRTSYVIAPGGQVIHTYSKLD PSEHVSQTLSAVKGWKAAKK >Mature_180_residues MHRLVAAAALCAVIATPAAAALKPGDKAPDFTAQGYQAGKPLTFSLAEARKKGPVVLYFFPAADTKGCNIEAKMFADAIP QFQAAGATVIGVTAGNLDKLQQISSDTDKCSGKFPVAADPGAKIAKQYDAVLAMKPDWSDRTSYVIAPGGQVIHTYSKLD PSEHVSQTLSAVKGWKAAKK
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18822; Mature: 18822
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRLVAAAALCAVIATPAAAALKPGDKAPDFTAQGYQAGKPLTFSLAEARKKGPVVLYFF CCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCEEEEEE PAADTKGCNIEAKMFADAIPQFQAAGATVIGVTAGNLDKLQQISSDTDKCSGKFPVAADP CCCCCCCCCCHHHHHHHHCCHHHHCCCEEEEEECCCHHHHHHHHCCHHHCCCCCCCCCCC GAKIAKQYDAVLAMKPDWSDRTSYVIAPGGQVIHTYSKLDPSEHVSQTLSAVKGWKAAKK CHHHHHHHCEEEEECCCCCCCCCEEECCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHRLVAAAALCAVIATPAAAALKPGDKAPDFTAQGYQAGKPLTFSLAEARKKGPVVLYFF CCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCEEEEEE PAADTKGCNIEAKMFADAIPQFQAAGATVIGVTAGNLDKLQQISSDTDKCSGKFPVAADP CCCCCCCCCCHHHHHHHHCCHHHHCCCEEEEEECCCHHHHHHHHCCHHHCCCCCCCCCCC GAKIAKQYDAVLAMKPDWSDRTSYVIAPGGQVIHTYSKLDPSEHVSQTLSAVKGWKAAKK CHHHHHHHCEEEEECCCCCCCCCEEECCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: reduced acceptor; H2O2; reduced thioredoxin [C]
Specific reaction: reduced acceptor + H2O2 = Acceptor + H2O reduced thioredoxin + H2O2 = oxidized thioredoxin + H2O [C]
General reaction: Oxidoreductases; Acting on a peroxide as acceptor; Peroxidase [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA