| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105003
Identifier: 197105003
GI number: 197105003
Start: 1740990
End: 1741604
Strand: Reverse
Name: 197105003
Synonym: PHZ_c1540
Alternate gene names: NA
Gene position: 1741604-1740990 (Counterclockwise)
Preceding gene: 197105004
Following gene: 197105002
Centisome position: 43.58
GC content: 70.73
Gene sequence:
>615_bases ATGGGACTAGGAATGACGCAGTTCGATTTCATCGTCCTGGCGCTGCTGCTGATTTCGGCGGCGGTCGGCTTCGCCAGGGG CGCGGTGCGCGAGATCGCGGCCCTCGTGGCGCTGATCGGCGCGGCCCTGCTGGCGATCTTCGGACTGCCGCTGTCCGCGC CGGTGGTGCGGGAGGTCGTCCGCCCCGACTGGCTGGGAACGGCCGCCGCCCTGATCCTGGTGTTCGGGACCGCTTATGTC GTCCTGCGTCTGATCGGCGCAGCCCTTGCGCGGAAGGTGCAGCGCACCGACGTGCTGGGCGCCCTCGACCGGTCCGTCGG CCTGGCCATCGGCCTGGCTCGGGGGCTTCTCGTCCTCGGAGCGCTCTTCCTGATGTTCAACGCCGCCACGCCCCAGGACC TGCGTCCGCGCTGGATCACCGGCGCGACCACCTGGCCGCTCGCGAGCAACATGGGCCGGCTGCTGGAGGCCATGGCCCCC CAGGGCCTGGACATCGCCGAGCGGCTCCGCCCCGCTTTCGACCGGGCGGTGCGAAACGGGTCAGGTGACAGACGCGTGAC GGACGGCTACGACGCGCCGCGAAACGGCGAGACGGATCTGGAGAGGTCTCGATGA
Upstream 100 bases:
>100_bases GTCGCGGGCTCGGTCCCGCCGACGTCGAAGCCGCGGGCGGCATGACATTCACCGGGGTGAGCCGCCTCGCGGACGCCGTT CGCCGGATCGGCGACGGCGC
Downstream 100 bases:
>100_bases CCCTGTCGGCCAAGGCCATGGCGTACGATCGATGGTCCCCGCCGCCGCGGGACCCGGATGACGATACGCCGCGTCTGGAA TGCGGCGTGTTCGGCGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MGLGMTQFDFIVLALLLISAAVGFARGAVREIAALVALIGAALLAIFGLPLSAPVVREVVRPDWLGTAAALILVFGTAYV VLRLIGAALARKVQRTDVLGALDRSVGLAIGLARGLLVLGALFLMFNAATPQDLRPRWITGATTWPLASNMGRLLEAMAP QGLDIAERLRPAFDRAVRNGSGDRRVTDGYDAPRNGETDLERSR
Sequences:
>Translated_204_residues MGLGMTQFDFIVLALLLISAAVGFARGAVREIAALVALIGAALLAIFGLPLSAPVVREVVRPDWLGTAAALILVFGTAYV VLRLIGAALARKVQRTDVLGALDRSVGLAIGLARGLLVLGALFLMFNAATPQDLRPRWITGATTWPLASNMGRLLEAMAP QGLDIAERLRPAFDRAVRNGSGDRRVTDGYDAPRNGETDLERSR >Mature_203_residues GLGMTQFDFIVLALLLISAAVGFARGAVREIAALVALIGAALLAIFGLPLSAPVVREVVRPDWLGTAAALILVFGTAYVV LRLIGAALARKVQRTDVLGALDRSVGLAIGLARGLLVLGALFLMFNAATPQDLRPRWITGATTWPLASNMGRLLEAMAPQ GLDIAERLRPAFDRAVRNGSGDRRVTDGYDAPRNGETDLERSR
Specific function: Unknown
COG id: COG1286
COG function: function code R; Uncharacterized membrane protein, required for colicin V production
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21657; Mature: 21526
Theoretical pI: Translated: 11.33; Mature: 11.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLGMTQFDFIVLALLLISAAVGFARGAVREIAALVALIGAALLAIFGLPLSAPVVREVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH RPDWLGTAAALILVFGTAYVVLRLIGAALARKVQRTDVLGALDRSVGLAIGLARGLLVLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALFLMFNAATPQDLRPRWITGATTWPLASNMGRLLEAMAPQGLDIAERLRPAFDRAVRNG HHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC SGDRRVTDGYDAPRNGETDLERSR CCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GLGMTQFDFIVLALLLISAAVGFARGAVREIAALVALIGAALLAIFGLPLSAPVVREVV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH RPDWLGTAAALILVFGTAYVVLRLIGAALARKVQRTDVLGALDRSVGLAIGLARGLLVLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALFLMFNAATPQDLRPRWITGATTWPLASNMGRLLEAMAPQGLDIAERLRPAFDRAVRNG HHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC SGDRRVTDGYDAPRNGETDLERSR CCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA