| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104985
Identifier: 197104985
GI number: 197104985
Start: 1725561
End: 1726169
Strand: Reverse
Name: 197104985
Synonym: PHZ_c1522
Alternate gene names: NA
Gene position: 1726169-1725561 (Counterclockwise)
Preceding gene: 197104986
Following gene: 197104974
Centisome position: 43.19
GC content: 67.65
Gene sequence:
>609_bases GTGCCGTCCCGCGAGCCGACTGCCGCATTCGCGACGGCTGGGCTCGACCTGGTCCGCATCCCAGCTGGCCGCACCTTTGG CCGCATCTACCACCAGCGCTTCCCGGACCCCCTCGGCTTCGGGAAGAGCCGCAGCCGGTTTAGCGACCCACGACGCCGGA TCGAGGCGAACCGCTTCGGAGTGCTCTACCTGGGCTCGTCACTGAAGGTCTGCTTCCTCGAGGCGGTCCTTCGCGACGAC CGGGACGGCCTCGTGGGCGACTTCCCCATGGATGAGGCCGAGCTCGACTCGCGGCGGTACGCACAGGTGGTCACCAACGC CGAACTCGCCCTGCTTGACCTGACCGGCGACGGACCTATCCGAATGGGCGTGCCCAGCGACGTCCTGCGATCCTCGCGCC AAGCGCTCGCGCGCCGCTGGTCCGTCGCCTTCCATGACCACCCGGCGCGGGTTGACGGGATCTACTATCCGTCCCGCCTC AACGGCGAAGTGAACCTCGCAATCTATGGCCGAGCCGTGCCCAAGCTCACGGTCGCCACATCCGGATCTCTTCGCATGGC GCCAGGGCTGGCTCGGGTTCTCAACGACCTTGAAGTGGCGCTGGTCTGA
Upstream 100 bases:
>100_bases GGAGTTGGAAGGTGCGACTGGCGTGGATGCGTTGCGCCAGGGCCGGACAGGCGAGGTGCTCGAAGCTGCTGAGAGCCTTG CCGCCGGAGCGCTTGGCTAG
Downstream 100 bases:
>100_bases TTTGTGAGAATGTCTTGCTAGAGGCCAGAAACTGAACGTGCTTTTCCGATTGCGCTGAGGTTCAGTGACTGCCTCGCCGT CACCTCCGCTCTCGTCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MPSREPTAAFATAGLDLVRIPAGRTFGRIYHQRFPDPLGFGKSRSRFSDPRRRIEANRFGVLYLGSSLKVCFLEAVLRDD RDGLVGDFPMDEAELDSRRYAQVVTNAELALLDLTGDGPIRMGVPSDVLRSSRQALARRWSVAFHDHPARVDGIYYPSRL NGEVNLAIYGRAVPKLTVATSGSLRMAPGLARVLNDLEVALV
Sequences:
>Translated_202_residues MPSREPTAAFATAGLDLVRIPAGRTFGRIYHQRFPDPLGFGKSRSRFSDPRRRIEANRFGVLYLGSSLKVCFLEAVLRDD RDGLVGDFPMDEAELDSRRYAQVVTNAELALLDLTGDGPIRMGVPSDVLRSSRQALARRWSVAFHDHPARVDGIYYPSRL NGEVNLAIYGRAVPKLTVATSGSLRMAPGLARVLNDLEVALV >Mature_201_residues PSREPTAAFATAGLDLVRIPAGRTFGRIYHQRFPDPLGFGKSRSRFSDPRRRIEANRFGVLYLGSSLKVCFLEAVLRDDR DGLVGDFPMDEAELDSRRYAQVVTNAELALLDLTGDGPIRMGVPSDVLRSSRQALARRWSVAFHDHPARVDGIYYPSRLN GEVNLAIYGRAVPKLTVATSGSLRMAPGLARVLNDLEVALV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014914 [H]
Pfam domain/function: PF08808 RES [H]
EC number: NA
Molecular weight: Translated: 22283; Mature: 22152
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSREPTAAFATAGLDLVRIPAGRTFGRIYHQRFPDPLGFGKSRSRFSDPRRRIEANRFG CCCCCCCHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHCCCEE VLYLGSSLKVCFLEAVLRDDRDGLVGDFPMDEAELDSRRYAQVVTNAELALLDLTGDGPI EEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCE RMGVPSDVLRSSRQALARRWSVAFHDHPARVDGIYYPSRLNGEVNLAIYGRAVPKLTVAT EECCCHHHHHHHHHHHHHHHHHEECCCCCCCCCEECCCCCCCEEEEEEECCCCCEEEEEE SGSLRMAPGLARVLNDLEVALV CCCEEECCHHHHHHHHHHEEEC >Mature Secondary Structure PSREPTAAFATAGLDLVRIPAGRTFGRIYHQRFPDPLGFGKSRSRFSDPRRRIEANRFG CCCCCCHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHCCCEE VLYLGSSLKVCFLEAVLRDDRDGLVGDFPMDEAELDSRRYAQVVTNAELALLDLTGDGPI EEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCE RMGVPSDVLRSSRQALARRWSVAFHDHPARVDGIYYPSRLNGEVNLAIYGRAVPKLTVAT EECCCHHHHHHHHHHHHHHHHHEECCCCCCCCCEECCCCCCCEEEEEEECCCCCEEEEEE SGSLRMAPGLARVLNDLEVALV CCCEEECCHHHHHHHHHHEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]