| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104986
Identifier: 197104986
GI number: 197104986
Start: 1726170
End: 1727042
Strand: Reverse
Name: 197104986
Synonym: PHZ_c1523
Alternate gene names: NA
Gene position: 1727042-1726170 (Counterclockwise)
Preceding gene: 197104988
Following gene: 197104985
Centisome position: 43.22
GC content: 66.55
Gene sequence:
>873_bases CTGACGCGGCCAATTCGCGCTGCGCAGGCCAGGTGGCCGGCGCCCGTGATCTGCTCACCGGAACTTTACGAACTTAACGG AATTGACGAAGCTAACGCGGAAGCCCAGATTGTCGGGGAAAGGACCAACCCCATGGCAGAGAAGGCATCGTCAGCCGGCC GCAGCACCGGCCGCTATGTGACCAAAGCCGACGCGGCCCGCCAACCGCGCACTACGGTGCGCGACAGCAAGGGCGAATTC ACGGTCGCCCTGCCGTCCAAATCCGTCCAGGCCCTCAATCCTCGCAAGTCGGGCGTCCGCGCCGTGATGGAAGTGCTGAG TGAGCGCATAACGGAGAGCCGCGAGAGCGGTCGGCGCACCGGCTTCTGGGTCGAAGTCGATCCCAAAGGCCAGCCGCGCG TCCACGCCAAGGCCACCATCGCAGACGATGCCAGGCCAGCGGGAAGCGACCGCGCCGAAGATCCAGATGATCTGGATGTA GCCCTGGCTGCGGCCCGCGAGCGCGGCCAGCTTCGGGTGGCGGAGATCCTGGCCGGCGACGAGATGCTCAGCGCGGATGC TTTCGCGGAGTTGCTCGGCGTCAGCCGCGTGACCGTGAACGCGAAGCGGCAGAGGCATGAGGTGCTGGCGGTGGACGGCG CCCGCCGGGGATTCCGCTTCCCTGCCTGGCAGGTTGACGAGAACGGCAAGCCCTTCGCCGCTATCCCGCAGCTTTTCGAA AAGCTCGGCGACAGCCCCTGGACTGTGTACCGCTTCCTCATTCAGCGCCATCCGGAGTTGGAAGGTGCGACTGGCGTGGA TGCGTTGCGCCAGGGCCGGACAGGCGAGGTGCTCGAAGCTGCTGAGAGCCTTGCCGCCGGAGCGCTTGGCTAG
Upstream 100 bases:
>100_bases CCGCAGACCAACGGGAGTTGCAGCAGCTGGAGGCGGACATTGATGCCCTGCGCACTGAGCTGCATGAACGGCTTGGCCCG CCGCCCAACTCCGTTTTGCA
Downstream 100 bases:
>100_bases GTGCCGTCCCGCGAGCCGACTGCCGCATTCGCGACGGCTGGGCTCGACCTGGTCCGCATCCCAGCTGGCCGCACCTTTGG CCGCATCTACCACCAGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTRPIRAAQARWPAPVICSPELYELNGIDEANAEAQIVGERTNPMAEKASSAGRSTGRYVTKADAARQPRTTVRDSKGEF TVALPSKSVQALNPRKSGVRAVMEVLSERITESRESGRRTGFWVEVDPKGQPRVHAKATIADDARPAGSDRAEDPDDLDV ALAAARERGQLRVAEILAGDEMLSADAFAELLGVSRVTVNAKRQRHEVLAVDGARRGFRFPAWQVDENGKPFAAIPQLFE KLGDSPWTVYRFLIQRHPELEGATGVDALRQGRTGEVLEAAESLAAGALG
Sequences:
>Translated_290_residues MTRPIRAAQARWPAPVICSPELYELNGIDEANAEAQIVGERTNPMAEKASSAGRSTGRYVTKADAARQPRTTVRDSKGEF TVALPSKSVQALNPRKSGVRAVMEVLSERITESRESGRRTGFWVEVDPKGQPRVHAKATIADDARPAGSDRAEDPDDLDV ALAAARERGQLRVAEILAGDEMLSADAFAELLGVSRVTVNAKRQRHEVLAVDGARRGFRFPAWQVDENGKPFAAIPQLFE KLGDSPWTVYRFLIQRHPELEGATGVDALRQGRTGEVLEAAESLAAGALG >Mature_289_residues TRPIRAAQARWPAPVICSPELYELNGIDEANAEAQIVGERTNPMAEKASSAGRSTGRYVTKADAARQPRTTVRDSKGEFT VALPSKSVQALNPRKSGVRAVMEVLSERITESRESGRRTGFWVEVDPKGQPRVHAKATIADDARPAGSDRAEDPDDLDVA LAAARERGQLRVAEILAGDEMLSADAFAELLGVSRVTVNAKRQRHEVLAVDGARRGFRFPAWQVDENGKPFAAIPQLFEK LGDSPWTVYRFLIQRHPELEGATGVDALRQGRTGEVLEAAESLAAGALG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31446; Mature: 31314
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPIRAAQARWPAPVICSPELYELNGIDEANAEAQIVGERTNPMAEKASSAGRSTGRYV CCCCCCHHHCCCCCCEEECCCCEECCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCEE TKADAARQPRTTVRDSKGEFTVALPSKSVQALNPRKSGVRAVMEVLSERITESRESGRRT ECCHHCCCCCCHHCCCCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC GFWVEVDPKGQPRVHAKATIADDARPAGSDRAEDPDDLDVALAAARERGQLRVAEILAGD CEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEHHHHHCC EMLSADAFAELLGVSRVTVNAKRQRHEVLAVDGARRGFRFPAWQVDENGKPFAAIPQLFE HHHHHHHHHHHHCCHHEEECCHHHHCEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHH KLGDSPWTVYRFLIQRHPELEGATGVDALRQGRTGEVLEAAESLAAGALG HHCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure TRPIRAAQARWPAPVICSPELYELNGIDEANAEAQIVGERTNPMAEKASSAGRSTGRYV CCCCCHHHCCCCCCEEECCCCEECCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCEE TKADAARQPRTTVRDSKGEFTVALPSKSVQALNPRKSGVRAVMEVLSERITESRESGRRT ECCHHCCCCCCHHCCCCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC GFWVEVDPKGQPRVHAKATIADDARPAGSDRAEDPDDLDVALAAARERGQLRVAEILAGD CEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEHHHHHCC EMLSADAFAELLGVSRVTVNAKRQRHEVLAVDGARRGFRFPAWQVDENGKPFAAIPQLFE HHHHHHHHHHHHCCHHEEECCHHHHCEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHH KLGDSPWTVYRFLIQRHPELEGATGVDALRQGRTGEVLEAAESLAAGALG HHCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]