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The map label for this gene is trbL

Identifier: 197104980

GI number: 197104980

Start: 1721238

End: 1722404

Strand: Direct

Name: trbL

Synonym: PHZ_c1517

Alternate gene names: NA

Gene position: 1721238-1722404 (Clockwise)

Preceding gene: 197104979

Following gene: 197104981

Centisome position: 43.07

GC content: 68.64

Gene sequence:

>1167_bases
ATGAACCCCGGCGTCGCTGATCGCTTCCTGGACGTCTTCTCGCGCTACATCGACTCGGGCTTTGGCCTGCTCGGCGGAGA
AGTTGCCTTCCTGGCAAGCACCCTGGTGGTGATCGACGTCACCCTGGCGGCGCTGTTCTGGTCCTGGTCGGCCGGCGACG
ACGTGATCGCCCGGCTCATCAAGAAGACGCTGTACGTCGGCTTCTTCGCCTTCCTACTGTCGAACTTCAACGGACTGGCG
AAGATCGTCTTCCAGTCCTTCTCGGGTCTGGGCCTCAAAGCCGCGGGCAGCGGCATGTCCGCCGCCGACTTCCTGCGTCC
GGGCAAGCTGGCGCAATCAGGCATCGACGCAGGAAGGCCTCTCCTGCAAGCGGCGCACGAGATGTCCGGCTTCCCCGGCT
TCTTCGACAACTTCGCTCAGATCATCGTCATCATGGTGGCCTGGCTCATCGTCCTCATCGCCTTCTTCGTGCTCGCGGTG
CAGCTCTTCGTCACCCTGATCGAGTTCAAGCTGACGACGCTGGCCGGCTTCATTCTCGTGCCCTTCGGCCTCTTCGGGCG
GACGGCTTTTCTGGCCGAGCGTGTGCTCGGAAATGTCGTCGCCTCCGGCGTGAAGGTGCTGGTCCTGGCGGTGATCGTTG
GGATTGGCTCCACCTTGTTCGGCGAGTTCATCCAGGACTTCGGCGGGCAGCAACCCTCGCTGGAGGAGGTGCTCTCCCTG
GCGCTGGCGTCGCTCTGCCTCCTTGGTCTCGGCATCTTCGGGCCCGCCGTCGCCAATGGCCTGGTGTCGGGGGCGCCGCA
GCTCGGGGCAGGGGCCGCCGTCGGGACTGGCCTCGCCGCCGGCGGCCTCGCGGCTGCTGGCGCAATGGGCACGCGCGCCG
CGATCGGCGCCGGCGTCGGGGGCGCGCGAGGCGCCATCGCTGCCGCGCGTGGCTTCCGCTCCGGTCCCTCGGGCTCCGGT
GACAGCGGCTTACGGCCCAATCCGCCCTCCGGACCCGGCGGACATGCGGGTGGTGGGCCTGGAGGCGGCGGCGCGCCGGC
GTGGGCACGCCAATACCAGCGCCGTCAGGAAGCGGCCCACGGCGCCGCGACCGCCGCCCACGCCCTTCGTTCCGGCGACC
ATCCCGGCGGCGGAACCTCCGTCTCGCTCGCAGAGGATCGGTCATGA

Upstream 100 bases:

>100_bases
AACGATGCGCCCGCGGCGGAGCGCAGGCGGCGAACGACCCCACCTGCCGGGCTGTGCGGGACGAAAACTTCGACAGGTTC
CTAGGAGAGGACGGCAAGAG

Downstream 100 bases:

>100_bases
ACGTCTTCACTCGACCCGGGGTGCGCTATGGCGCGACCCCCGCCCTCGACACACCTTACCAGCGCGCGGCGCAGGCCTGG
GACGACCGGATCGGCTCTGC

Product: conjugal transfer protein TrbL

Products: NA

Alternate protein names: P-Type Conjugative Transfer Protein TrbL; TrbL/VirB6 Plasmid Conjugal Transfer Protein; Conjugal Transfer Protein; P-Type Conjugative Transfer Protein Trbl; Conjugal Transfer Protein Trbl; Type IV Secretory Pathway TrbL Component; Type IV Secretion System Protein; Conjugative Transfer Protein TrbL; Type IV Secretory Pathway TrbL-Like Protein

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MNPGVADRFLDVFSRYIDSGFGLLGGEVAFLASTLVVIDVTLAALFWSWSAGDDVIARLIKKTLYVGFFAFLLSNFNGLA
KIVFQSFSGLGLKAAGSGMSAADFLRPGKLAQSGIDAGRPLLQAAHEMSGFPGFFDNFAQIIVIMVAWLIVLIAFFVLAV
QLFVTLIEFKLTTLAGFILVPFGLFGRTAFLAERVLGNVVASGVKVLVLAVIVGIGSTLFGEFIQDFGGQQPSLEEVLSL
ALASLCLLGLGIFGPAVANGLVSGAPQLGAGAAVGTGLAAGGLAAAGAMGTRAAIGAGVGGARGAIAAARGFRSGPSGSG
DSGLRPNPPSGPGGHAGGGPGGGGAPAWARQYQRRQEAAHGAATAAHALRSGDHPGGGTSVSLAEDRS

Sequences:

>Translated_388_residues
MNPGVADRFLDVFSRYIDSGFGLLGGEVAFLASTLVVIDVTLAALFWSWSAGDDVIARLIKKTLYVGFFAFLLSNFNGLA
KIVFQSFSGLGLKAAGSGMSAADFLRPGKLAQSGIDAGRPLLQAAHEMSGFPGFFDNFAQIIVIMVAWLIVLIAFFVLAV
QLFVTLIEFKLTTLAGFILVPFGLFGRTAFLAERVLGNVVASGVKVLVLAVIVGIGSTLFGEFIQDFGGQQPSLEEVLSL
ALASLCLLGLGIFGPAVANGLVSGAPQLGAGAAVGTGLAAGGLAAAGAMGTRAAIGAGVGGARGAIAAARGFRSGPSGSG
DSGLRPNPPSGPGGHAGGGPGGGGAPAWARQYQRRQEAAHGAATAAHALRSGDHPGGGTSVSLAEDRS
>Mature_388_residues
MNPGVADRFLDVFSRYIDSGFGLLGGEVAFLASTLVVIDVTLAALFWSWSAGDDVIARLIKKTLYVGFFAFLLSNFNGLA
KIVFQSFSGLGLKAAGSGMSAADFLRPGKLAQSGIDAGRPLLQAAHEMSGFPGFFDNFAQIIVIMVAWLIVLIAFFVLAV
QLFVTLIEFKLTTLAGFILVPFGLFGRTAFLAERVLGNVVASGVKVLVLAVIVGIGSTLFGEFIQDFGGQQPSLEEVLSL
ALASLCLLGLGIFGPAVANGLVSGAPQLGAGAAVGTGLAAGGLAAAGAMGTRAAIGAGVGGARGAIAAARGFRSGPSGSG
DSGLRPNPPSGPGGHAGGGPGGGGAPAWARQYQRRQEAAHGAATAAHALRSGDHPGGGTSVSLAEDRS

Specific function: Unknown

COG id: COG3846

COG function: function code U; Type IV secretory pathway, TrbL components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39046; Mature: 39046

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCCCCCCEECCCCCCC
>Mature Secondary Structure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HHHHHHHHHHCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA