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The map label for this gene is yobA [C]

Identifier: 197104946

GI number: 197104946

Start: 1682541

End: 1682912

Strand: Reverse

Name: yobA [C]

Synonym: PHZ_c1481

Alternate gene names: 197104946

Gene position: 1682912-1682541 (Counterclockwise)

Preceding gene: 197104952

Following gene: 197104945

Centisome position: 42.11

GC content: 66.13

Gene sequence:

>372_bases
ATGACGTTCAAGTTCCAAACCATCGCCGCCCTGGCCGGGACCGTCGCTTTGGCCGCGACCAGCCCGGCCTGGGCCCACGC
CCGCCTGGTGAGTTCGGACCCCGCCGCCAACGCGACCCTCTCGGCGCCGCCGAAGGCGATCACGCTTACCTTCAATGAGA
AGCTGATCCCGGCCTTTTCGAAGTTCGAACTGACCATGCCCGAGCACGGGGGCATGAAGGTCGCCGTCAAGACGGCTGTC
TCCAAGGACGGCAAGAGCATCACCGGCGCGCCGCAAGCCGCGCTGACCAAGGGCGCTTACAAGATCATCTGGTCCGCCGC
GACGGGCGACGGGCACAAGATGAGCGGCGAAGTCGCCTTCAAGGTCGGCTGA

Upstream 100 bases:

>100_bases
CGACTTCGCCCGGCGCCGCAACGAACGGCTCCGTCGCCGATCTGAGGGTTCGCGCCGTTGGGTGCGTATTTCCTGGTGTC
GAGAAGAAGAGGACTGCCTC

Downstream 100 bases:

>100_bases
CGTGCTGGACTCTGCGGTCGTCGCCCTAAGGCTGCTGCAGTATGGCGGAGCGATGATCCTCCTGGGATCATCGCTCTTCT
TCATCCACGCCCTCCCCCGA

Product: copper resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MTFKFQTIAALAGTVALAATSPAWAHARLVSSDPAANATLSAPPKAITLTFNEKLIPAFSKFELTMPEHGGMKVAVKTAV
SKDGKSITGAPQAALTKGAYKIIWSAATGDGHKMSGEVAFKVG

Sequences:

>Translated_123_residues
MTFKFQTIAALAGTVALAATSPAWAHARLVSSDPAANATLSAPPKAITLTFNEKLIPAFSKFELTMPEHGGMKVAVKTAV
SKDGKSITGAPQAALTKGAYKIIWSAATGDGHKMSGEVAFKVG
>Mature_122_residues
TFKFQTIAALAGTVALAATSPAWAHARLVSSDPAANATLSAPPKAITLTFNEKLIPAFSKFELTMPEHGGMKVAVKTAVS
KDGKSITGAPQAALTKGAYKIIWSAATGDGHKMSGEVAFKVG

Specific function: Mediates copper resistance by sequestration of copper in the periplasm [H]

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopC family [H]

Homologues:

Organism=Escherichia coli, GI1788146, Length=113, Percent_Identity=35.3982300884956, Blast_Score=67, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC [H]

EC number: NA

Molecular weight: Translated: 12645; Mature: 12514

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFKFQTIAALAGTVALAATSPAWAHARLVSSDPAANATLSAPPKAITLTFNEKLIPAFS
CCEEHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCCCEECCCCCEEEEEECCCCCCCCC
KFELTMPEHGGMKVAVKTAVSKDGKSITGAPQAALTKGAYKIIWSAATGDGHKMSGEVAF
EEEEECCCCCCEEEEEEEEECCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCEECCEEEE
KVG
EEC
>Mature Secondary Structure 
TFKFQTIAALAGTVALAATSPAWAHARLVSSDPAANATLSAPPKAITLTFNEKLIPAFS
CEEHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCCCEECCCCCEEEEEECCCCCCCCC
KFELTMPEHGGMKVAVKTAVSKDGKSITGAPQAALTKGAYKIIWSAATGDGHKMSGEVAF
EEEEECCCCCCEEEEEEEEECCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCEECCEEEE
KVG
EEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282694 [H]