| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197104855
Identifier: 197104855
GI number: 197104855
Start: 1572711
End: 1573394
Strand: Direct
Name: 197104855
Synonym: PHZ_c1389
Alternate gene names: NA
Gene position: 1572711-1573394 (Clockwise)
Preceding gene: 197104854
Following gene: 197104856
Centisome position: 39.35
GC content: 75.58
Gene sequence:
>684_bases ATGGACGAACAGCGTGAGCCGCCCAAGGACCGCCGCAAGGGCCTCGTGATCGCCGGCGCGGCCGTCGCCCTTCTGGCCGG CGTGCTGATCGCCTGGTTGCTGGTCTCGAGCGGGCGAGGGGAGAGGACCCCGCCGCCTCCCGCCTCGCAAGGCGGTCTCG TCATCGAGAGCGGCCCTGACGACGGGCGCATCGACCCCGCCAAGCCGCTCCGCTGCTTCGTGGCCGGTCAGTTCGTCGGC GAGTTCACCCTGACCGAATGCGCGCAGCGCAACGGCGTCGCCACCGGGGCGCTCGACGTGGGGATCGACGAGACCGGCGC GCTCGCCGCCTCGCAGGAGGCGGGCCTGGTGCTCACGCCGCTGCCGCCGCCCGAGGAGGCCGAGGCCGCGCCCAGCGCCG CCGAAGCGGCCCCGCCGCCGGCCACGCCCGCCGGCCCGCTGGCGGCTTGCTGGCGGCACAGCGGCGGCCAATGGCGGCGG CTGCCGTCCGAGATGGGGCTCGACGCGTGCGTGCAGGCGCTGTTCGCCGGCCGCTGCGAGCGTCCCGGTCAGGCGACCTA CGGCCGCTGGGGCCAGCAGACCCTTCGCCTCGTCACGGGGCGGGTGGAGATCTCGTCCGACAATCAGAGCTTCCGCACGC TGGTGAACCAGGGCGCGGGCTGCAGCCTCCCGCCCGCCGGGTGA
Upstream 100 bases:
>100_bases TCACCGACCAGATCGCCAACTACCAGGCCGCTCTGGCGCGATTGGGCGGATAAGGCGCCGCGCGCTTGAAAGCCGAGCCG TCGCGGTCTAGCGAGGCGCC
Downstream 100 bases:
>100_bases CGGCCCGCCCGCCGGCTGGTAGGCTCTTACGCATGTACGCCAAGCCACTCCTCCTGGTCGCCGTCGCCGCCCTGGCCCTT TCGGGCTGCGCCAAGCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MDEQREPPKDRRKGLVIAGAAVALLAGVLIAWLLVSSGRGERTPPPPASQGGLVIESGPDDGRIDPAKPLRCFVAGQFVG EFTLTECAQRNGVATGALDVGIDETGALAASQEAGLVLTPLPPPEEAEAAPSAAEAAPPPATPAGPLAACWRHSGGQWRR LPSEMGLDACVQALFAGRCERPGQATYGRWGQQTLRLVTGRVEISSDNQSFRTLVNQGAGCSLPPAG
Sequences:
>Translated_227_residues MDEQREPPKDRRKGLVIAGAAVALLAGVLIAWLLVSSGRGERTPPPPASQGGLVIESGPDDGRIDPAKPLRCFVAGQFVG EFTLTECAQRNGVATGALDVGIDETGALAASQEAGLVLTPLPPPEEAEAAPSAAEAAPPPATPAGPLAACWRHSGGQWRR LPSEMGLDACVQALFAGRCERPGQATYGRWGQQTLRLVTGRVEISSDNQSFRTLVNQGAGCSLPPAG >Mature_227_residues MDEQREPPKDRRKGLVIAGAAVALLAGVLIAWLLVSSGRGERTPPPPASQGGLVIESGPDDGRIDPAKPLRCFVAGQFVG EFTLTECAQRNGVATGALDVGIDETGALAASQEAGLVLTPLPPPEEAEAAPSAAEAAPPPATPAGPLAACWRHSGGQWRR LPSEMGLDACVQALFAGRCERPGQATYGRWGQQTLRLVTGRVEISSDNQSFRTLVNQGAGCSLPPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23463; Mature: 23463
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEQREPPKDRRKGLVIAGAAVALLAGVLIAWLLVSSGRGERTPPPPASQGGLVIESGPD CCCCCCCCHHHHCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCC DGRIDPAKPLRCFVAGQFVGEFTLTECAQRNGVATGALDVGIDETGALAASQEAGLVLTP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEECCCCCCEEECC LPPPEEAEAAPSAAEAAPPPATPAGPLAACWRHSGGQWRRLPSEMGLDACVQALFAGRCE CCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHCHHHCCHHHHHHHHHHHCCC RPGQATYGRWGQQTLRLVTGRVEISSDNQSFRTLVNQGAGCSLPPAG CCCCCCCCHHHHHHHHHHHCEEEECCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDEQREPPKDRRKGLVIAGAAVALLAGVLIAWLLVSSGRGERTPPPPASQGGLVIESGPD CCCCCCCCHHHHCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCC DGRIDPAKPLRCFVAGQFVGEFTLTECAQRNGVATGALDVGIDETGALAASQEAGLVLTP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEECCCCCCEEECC LPPPEEAEAAPSAAEAAPPPATPAGPLAACWRHSGGQWRRLPSEMGLDACVQALFAGRCE CCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHCHHHCCHHHHHHHHHHHCCC RPGQATYGRWGQQTLRLVTGRVEISSDNQSFRTLVNQGAGCSLPPAG CCCCCCCCHHHHHHHHHHHCEEEECCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA