| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is flaEY [H]
Identifier: 197104854
GI number: 197104854
Start: 1569862
End: 1572663
Strand: Direct
Name: flaEY [H]
Synonym: PHZ_c1388
Alternate gene names: 197104854
Gene position: 1569862-1572663 (Clockwise)
Preceding gene: 197104853
Following gene: 197104855
Centisome position: 39.28
GC content: 70.41
Gene sequence:
>2802_bases ATGGTCATCTCGATCGACACCAGCCTGCTCATGGGGCTCTACCAGTCGCGGCTGGTGGGGACGGGCGCGGCTTTGTCGAC CCAGGCCCGGGCCTCGACCAGCTCCAAGTCCGCCCCCACGGCTCCCTGGAGCACAGGGGGGACCGCCCCCGACCCGGCGC AGACCGTCAAGGCGGCGCTGCAGGGGCGCAAGTTCATCGACGAGGGCGGCGCCCAGCTCGACCTGCCCGGCGCCAGCACC GATTACCGCAAGATGTTCGCCCTCTACTCGGGCCTGTCGACCCTGATGGGTTTGGCCGAGCGGATGCAGGGCAAGGGCGT CACCAGCATCGAGAGGTCGCAGATCCAGCGGGCGTTCGCCCGGGGCATGGCCGAGGTCGGCGACTACGTCAGCAAGGCCA AGTTCGAGAACCTGCGCCTCGTCCAGGGCGAGGCCGTCGACCGCGCCAAGACCACCGCTCCGGTCCCGCGCAACAAGACC GAATACATCACCCCGCCGCTCGTCAGCGGGTCCAGCGCCGACGCCGTCCCGGCCTTCTCCGGCGACGTGAAGTTCAACAT CAAGATCAAGCGCGGCGGCGTGAACCACGACATCGCCATCGACCTGGCGGGCATGGGCGCCCAGACGCGGTCGCTGGCGA ACGTCGTCAACTTCGTGAACGACCAGCTGGCCGCCGCCGGCGTCGACACGCGCTTCGCCACCCACAGGACGCCGGGACAG CCGAAGACGATCGAGTCCGGCGGCAAGACCATCACGCTGAAGACCACAAACCCGGACCAGTGGTCGCTGAAGGTGAAGGT CTCGGTCGGCGAGACCGTGAGCTTCGACGCGCCCGCCACGGCCGGCGCGGCCTACCTCGTGCAGACCGCCGGGGATCCGG ATCCCGACGGCAAGATCACCACCAACGACGGGGTGCTGCGCCAGCAGCTGGTGAAGTTCCAGACCGACACCGCCACCGTG CCCGCGCCCGTCCAGCAGGAGGGCGAGCAGTACTGGGTGGACGGCCGCGCCTTCTCCAAGACCTTCGGACCCGAGGTGAA GACGGTTCGCTCGACCCAGGTGGGGCCGGACGGCTCGGTCTACATGCTGGCCGACGTGACCGGGAAGATCGACGGCGAGA CGCTGAAGGGAACCCAGGACGTCGCCCTGCTGAAGTTCGATGCGGCCGGCAAGCTCGTCTATTCCCGAACGCTGGGCGCG TCGGAGGAGGCCACGGGCCTCGCCCTGGCGGTGTCGGCCGACGGAAAGGTCGCGATCGCGGGGGCGGTCAAGGGCGGCCT CAACGGCGCGACCGACGGGCCCCTGAACTCAGGGACCACCGGCGTCTACGCCGACCAGTCGGACAGCTTCGTCACCCTCT TCAACGCCGACGGCGAGGAGATCTGGACCGCGCGGCGGGGCGCGCGCAAGCAGGACGAGGCCACCCACGTGGCGTTCGCC GCGGACGGCTCGATCATCGTGGCCGGCCGGGCGCAGTCGACCATGCCGGGCTCGACGGCGGTCGGCGACTGGGACAGCTA CATCCAGGCCTTCCAGCCCGAGCTGGAGACAACGCCCGAAGACCGGAAGGGCAAGGTCAAGACGCTCTTCACCGAGACCT TCGGCTCGACGGGCGCCGACCGGCCGGCAGGGATGGTCGTGGACGGGACCTCGGTGGTCACCGCGAGCGTCGAGGAGGGC CGGGCGGTCCTGCGGCGGTTCGACATTTCGGGCGGAACGCCGGTGCTGACCGCCACCCGCGACCTGGGCGATCTGCAGGG CGGGGAGATCGCGGGTCTGGCGCTCGACGGCGGCCAGGTGGTTATCGCCGGCTACACCGCGAACGCGGGCCTGGCCGCCG GGACCGTGACGCGCGCCCACGCCGGTGGGACCGACGCCTTCGCCGCGCGGCTGTCCGCCGACCTGAGCGCAGGCGCGGGC GACCGCATCGCCTTCTACGGGGGCGCGGGCGACGACCGGGCCACGTCGCTGGCGGTCTCGGGCGGCCAGGTGTGGATCGC AGGCGCCGCCGGGACCGACCTGCCGGGCCATCCGGACAAGGTCGGGGACGCCGACGGCTTCCTCACACGGCTGGACGTGG CGACGGGCGCGGTGGACTGGTCGCGGCGCTTCACGGCCAAGGACGGGCACGCCACGCCCACGTCCATCGCCATCGACCCG AACGGCGCCAGCGTCCTCGACCGGATCGGCCTGCCGAAGGGAACGCTGGAGCTGAAGGACTCCCAGACCATCGTCGCCCA GACCGGCATCCGGCCTGGAGAGGAGTTCCGGATCCGGTCGGGGTCCGGGCGCTGGTCGGCGGTGACCATCGACGAGAAGG ACACTATCGACACCCTGGCCCAGAAGATCCGCCGCGCGACGGGTTTCCAGGCCAAGGTCAACGTGACCACCAGCAACGGT TTGCGGGTGCTCTCGGTCACGCCCTCGAACGATCGCTCGGTGATCGAGTTCAGCGCCGGCAAGGCCGACAAGGACGCCCT GGCCCAGTTGGGCATCCCCGAGGGCGTGGTGCGCGCCACCGATTTCAGGGACGGCAAGACGGTGGCGGCCGACGGCAAGC CGATGATCTACGGCCTGTCGCTCGACACCGACCTGAACCTCGACAACGCCACCGAGATCAGCCACGCGCTGGCCGACGTC GCCAAGGCGCAGGGCGTGATCCGCCAGATCTATCGGGACCTCGTCCGCGGCGCGACGCCGGAGGATCCCTTGGCCAAGGC GCAGATCACCGGCACGGCGCCCAAGTACCTCACCGACCAGATCGCCAACTACCAGGCCGCTCTGGCGCGATTGGGCGGAT AA
Upstream 100 bases:
>100_bases GGGAGCCGGCCGGGCTCTTCTTTCTTGAGGCGGCTTAACGGGCTGGAGACCTTGATCGTCTAAGAAAGCGGAGCAGATCC GCCTCCGCGGGTGAGGGCCG
Downstream 100 bases:
>100_bases GGCGCCGCGCGCTTGAAAGCCGAGCCGTCGCGGTCTAGCGAGGCGCCATGGACGAACAGCGTGAGCCGCCCAAGGACCGC CGCAAGGGCCTCGTGATCGC
Product: regulatory protein FlaEY
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 933; Mature: 933
Protein sequence:
>933_residues MVISIDTSLLMGLYQSRLVGTGAALSTQARASTSSKSAPTAPWSTGGTAPDPAQTVKAALQGRKFIDEGGAQLDLPGAST DYRKMFALYSGLSTLMGLAERMQGKGVTSIERSQIQRAFARGMAEVGDYVSKAKFENLRLVQGEAVDRAKTTAPVPRNKT EYITPPLVSGSSADAVPAFSGDVKFNIKIKRGGVNHDIAIDLAGMGAQTRSLANVVNFVNDQLAAAGVDTRFATHRTPGQ PKTIESGGKTITLKTTNPDQWSLKVKVSVGETVSFDAPATAGAAYLVQTAGDPDPDGKITTNDGVLRQQLVKFQTDTATV PAPVQQEGEQYWVDGRAFSKTFGPEVKTVRSTQVGPDGSVYMLADVTGKIDGETLKGTQDVALLKFDAAGKLVYSRTLGA SEEATGLALAVSADGKVAIAGAVKGGLNGATDGPLNSGTTGVYADQSDSFVTLFNADGEEIWTARRGARKQDEATHVAFA ADGSIIVAGRAQSTMPGSTAVGDWDSYIQAFQPELETTPEDRKGKVKTLFTETFGSTGADRPAGMVVDGTSVVTASVEEG RAVLRRFDISGGTPVLTATRDLGDLQGGEIAGLALDGGQVVIAGYTANAGLAAGTVTRAHAGGTDAFAARLSADLSAGAG DRIAFYGGAGDDRATSLAVSGGQVWIAGAAGTDLPGHPDKVGDADGFLTRLDVATGAVDWSRRFTAKDGHATPTSIAIDP NGASVLDRIGLPKGTLELKDSQTIVAQTGIRPGEEFRIRSGSGRWSAVTIDEKDTIDTLAQKIRRATGFQAKVNVTTSNG LRVLSVTPSNDRSVIEFSAGKADKDALAQLGIPEGVVRATDFRDGKTVAADGKPMIYGLSLDTDLNLDNATEISHALADV AKAQGVIRQIYRDLVRGATPEDPLAKAQITGTAPKYLTDQIANYQAALARLGG
Sequences:
>Translated_933_residues MVISIDTSLLMGLYQSRLVGTGAALSTQARASTSSKSAPTAPWSTGGTAPDPAQTVKAALQGRKFIDEGGAQLDLPGAST DYRKMFALYSGLSTLMGLAERMQGKGVTSIERSQIQRAFARGMAEVGDYVSKAKFENLRLVQGEAVDRAKTTAPVPRNKT EYITPPLVSGSSADAVPAFSGDVKFNIKIKRGGVNHDIAIDLAGMGAQTRSLANVVNFVNDQLAAAGVDTRFATHRTPGQ PKTIESGGKTITLKTTNPDQWSLKVKVSVGETVSFDAPATAGAAYLVQTAGDPDPDGKITTNDGVLRQQLVKFQTDTATV PAPVQQEGEQYWVDGRAFSKTFGPEVKTVRSTQVGPDGSVYMLADVTGKIDGETLKGTQDVALLKFDAAGKLVYSRTLGA SEEATGLALAVSADGKVAIAGAVKGGLNGATDGPLNSGTTGVYADQSDSFVTLFNADGEEIWTARRGARKQDEATHVAFA ADGSIIVAGRAQSTMPGSTAVGDWDSYIQAFQPELETTPEDRKGKVKTLFTETFGSTGADRPAGMVVDGTSVVTASVEEG RAVLRRFDISGGTPVLTATRDLGDLQGGEIAGLALDGGQVVIAGYTANAGLAAGTVTRAHAGGTDAFAARLSADLSAGAG DRIAFYGGAGDDRATSLAVSGGQVWIAGAAGTDLPGHPDKVGDADGFLTRLDVATGAVDWSRRFTAKDGHATPTSIAIDP NGASVLDRIGLPKGTLELKDSQTIVAQTGIRPGEEFRIRSGSGRWSAVTIDEKDTIDTLAQKIRRATGFQAKVNVTTSNG LRVLSVTPSNDRSVIEFSAGKADKDALAQLGIPEGVVRATDFRDGKTVAADGKPMIYGLSLDTDLNLDNATEISHALADV AKAQGVIRQIYRDLVRGATPEDPLAKAQITGTAPKYLTDQIANYQAALARLGG >Mature_933_residues MVISIDTSLLMGLYQSRLVGTGAALSTQARASTSSKSAPTAPWSTGGTAPDPAQTVKAALQGRKFIDEGGAQLDLPGAST DYRKMFALYSGLSTLMGLAERMQGKGVTSIERSQIQRAFARGMAEVGDYVSKAKFENLRLVQGEAVDRAKTTAPVPRNKT EYITPPLVSGSSADAVPAFSGDVKFNIKIKRGGVNHDIAIDLAGMGAQTRSLANVVNFVNDQLAAAGVDTRFATHRTPGQ PKTIESGGKTITLKTTNPDQWSLKVKVSVGETVSFDAPATAGAAYLVQTAGDPDPDGKITTNDGVLRQQLVKFQTDTATV PAPVQQEGEQYWVDGRAFSKTFGPEVKTVRSTQVGPDGSVYMLADVTGKIDGETLKGTQDVALLKFDAAGKLVYSRTLGA SEEATGLALAVSADGKVAIAGAVKGGLNGATDGPLNSGTTGVYADQSDSFVTLFNADGEEIWTARRGARKQDEATHVAFA ADGSIIVAGRAQSTMPGSTAVGDWDSYIQAFQPELETTPEDRKGKVKTLFTETFGSTGADRPAGMVVDGTSVVTASVEEG RAVLRRFDISGGTPVLTATRDLGDLQGGEIAGLALDGGQVVIAGYTANAGLAAGTVTRAHAGGTDAFAARLSADLSAGAG DRIAFYGGAGDDRATSLAVSGGQVWIAGAAGTDLPGHPDKVGDADGFLTRLDVATGAVDWSRRFTAKDGHATPTSIAIDP NGASVLDRIGLPKGTLELKDSQTIVAQTGIRPGEEFRIRSGSGRWSAVTIDEKDTIDTLAQKIRRATGFQAKVNVTTSNG LRVLSVTPSNDRSVIEFSAGKADKDALAQLGIPEGVVRATDFRDGKTVAADGKPMIYGLSLDTDLNLDNATEISHALADV AKAQGVIRQIYRDLVRGATPEDPLAKAQITGTAPKYLTDQIANYQAALARLGG
Specific function: Functions in trans to modulate the level of transcription of the flagellin genes and several genes encoding chemotaxis functions. It is itself temporally controlled [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96910; Mature: 96910
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVISIDTSLLMGLYQSRLVGTGAALSTQARASTSSKSAPTAPWSTGGTAPDPAQTVKAAL CEEEECHHHHHHHHHHHHHCCCCHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH QGRKFIDEGGAQLDLPGASTDYRKMFALYSGLSTLMGLAERMQGKGVTSIERSQIQRAFA HCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH RGMAEVGDYVSKAKFENLRLVQGEAVDRAKTTAPVPRNKTEYITPPLVSGSSADAVPAFS HHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GDVKFNIKIKRGGVNHDIAIDLAGMGAQTRSLANVVNFVNDQLAAAGVDTRFATHRTPGQ CCEEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PKTIESGGKTITLKTTNPDQWSLKVKVSVGETVSFDAPATAGAAYLVQTAGDPDPDGKIT CCEECCCCCEEEEEECCCCCEEEEEEEEECCEEECCCCCCCCCEEEEEECCCCCCCCEEE TNDGVLRQQLVKFQTDTATVPAPVQQEGEQYWVDGRAFSKTFGPEVKTVRSTQVGPDGSV CCCHHHHHHHHHHCCCCCCCCCCHHHCCCEEEECCCHHHHHCCCCCEEEECCCCCCCCCE YMLADVTGKIDGETLKGTQDVALLKFDAAGKLVYSRTLGASEEATGLALAVSADGKVAIA EEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEE GAVKGGLNGATDGPLNSGTTGVYADQSDSFVTLFNADGEEIWTARRGARKQDEATHVAFA EEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCHHHHHHHCCCCCCCCCEEEEEE ADGSIIVAGRAQSTMPGSTAVGDWDSYIQAFQPELETTPEDRKGKVKTLFTETFGSTGAD ECCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHCCCCCC RPAGMVVDGTSVVTASVEEGRAVLRRFDISGGTPVLTATRDLGDLQGGEIAGLALDGGQV CCCCEEEECCEEEEEEHHHHHHHHHEECCCCCCEEEEEECCCCCCCCCEEEEEEECCCEE VIAGYTANAGLAAGTVTRAHAGGTDAFAARLSADLSAGAGDRIAFYGGAGDDRATSLAVS EEEEEECCCCCEECCEEECCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEE GGQVWIAGAAGTDLPGHPDKVGDADGFLTRLDVATGAVDWSRRFTAKDGHATPTSIAIDP CCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEHHHCCCCHHHCEECCCCCCCCCEEEECC NGASVLDRIGLPKGTLELKDSQTIVAQTGIRPGEEFRIRSGSGRWSAVTIDEKDTIDTLA CCHHHHHHCCCCCCEEEECCCCEEEEECCCCCCHHEEEECCCCCEEEEEECCCHHHHHHH QKIRRATGFQAKVNVTTSNGLRVLSVTPSNDRSVIEFSAGKADKDALAQLGIPEGVVRAT HHHHHHCCCEEEEEEEECCCEEEEEECCCCCCEEEEEECCCCCHHHHHHCCCCCCCEEEC DFRDGKTVAADGKPMIYGLSLDTDLNLDNATEISHALADVAKAQGVIRQIYRDLVRGATP CCCCCCEEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EDPLAKAQITGTAPKYLTDQIANYQAALARLGG CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVISIDTSLLMGLYQSRLVGTGAALSTQARASTSSKSAPTAPWSTGGTAPDPAQTVKAAL CEEEECHHHHHHHHHHHHHCCCCHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH QGRKFIDEGGAQLDLPGASTDYRKMFALYSGLSTLMGLAERMQGKGVTSIERSQIQRAFA HCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH RGMAEVGDYVSKAKFENLRLVQGEAVDRAKTTAPVPRNKTEYITPPLVSGSSADAVPAFS HHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GDVKFNIKIKRGGVNHDIAIDLAGMGAQTRSLANVVNFVNDQLAAAGVDTRFATHRTPGQ CCEEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PKTIESGGKTITLKTTNPDQWSLKVKVSVGETVSFDAPATAGAAYLVQTAGDPDPDGKIT CCEECCCCCEEEEEECCCCCEEEEEEEEECCEEECCCCCCCCCEEEEEECCCCCCCCEEE TNDGVLRQQLVKFQTDTATVPAPVQQEGEQYWVDGRAFSKTFGPEVKTVRSTQVGPDGSV CCCHHHHHHHHHHCCCCCCCCCCHHHCCCEEEECCCHHHHHCCCCCEEEECCCCCCCCCE YMLADVTGKIDGETLKGTQDVALLKFDAAGKLVYSRTLGASEEATGLALAVSADGKVAIA EEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEE GAVKGGLNGATDGPLNSGTTGVYADQSDSFVTLFNADGEEIWTARRGARKQDEATHVAFA EEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCHHHHHHHCCCCCCCCCEEEEEE ADGSIIVAGRAQSTMPGSTAVGDWDSYIQAFQPELETTPEDRKGKVKTLFTETFGSTGAD ECCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHCCCCCC RPAGMVVDGTSVVTASVEEGRAVLRRFDISGGTPVLTATRDLGDLQGGEIAGLALDGGQV CCCCEEEECCEEEEEEHHHHHHHHHEECCCCCCEEEEEECCCCCCCCCEEEEEEECCCEE VIAGYTANAGLAAGTVTRAHAGGTDAFAARLSADLSAGAGDRIAFYGGAGDDRATSLAVS EEEEEECCCCCEECCEEECCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEE GGQVWIAGAAGTDLPGHPDKVGDADGFLTRLDVATGAVDWSRRFTAKDGHATPTSIAIDP CCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEHHHCCCCHHHCEECCCCCCCCCEEEECC NGASVLDRIGLPKGTLELKDSQTIVAQTGIRPGEEFRIRSGSGRWSAVTIDEKDTIDTLA CCHHHHHHCCCCCCEEEECCCCEEEEECCCCCCHHEEEECCCCCEEEEEECCCHHHHHHH QKIRRATGFQAKVNVTTSNGLRVLSVTPSNDRSVIEFSAGKADKDALAQLGIPEGVVRAT HHHHHHCCCEEEEEEEECCCEEEEEECCCCCCEEEEEECCCCCHHHHHHCCCCCCCEEEC DFRDGKTVAADGKPMIYGLSLDTDLNLDNATEISHALADVAKAQGVIRQIYRDLVRGATP CCCCCCEEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EDPLAKAQITGTAPKYLTDQIANYQAALARLGG CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2648000; 11259647 [H]