| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is flbA [H]
Identifier: 197104847
GI number: 197104847
Start: 1563355
End: 1565145
Strand: Reverse
Name: flbA [H]
Synonym: PHZ_c1381
Alternate gene names: 197104847
Gene position: 1565145-1563355 (Counterclockwise)
Preceding gene: 197104858
Following gene: 197104846
Centisome position: 39.17
GC content: 72.64
Gene sequence:
>1791_bases ATGCCGGCCAAGGCCGCCCCCAGCGCCGTATCCGCCATCGCCCTTCAGGCCGGCTCCGCTCCCTCCCCCGCGCGGGTCGT GGGCGGGACCATCGGCGAGGCGGGCTCCAAGGAGGCGCTGAACCAGCTCTCCGCGGCGATGTCCGAGCTGAAGGCCCTGG CGATCCAGCCCATGCTGCAACGGGCCGTGGACGCGCTGAAGGCCAACGACCACCGGACCGGCGCCGAGTGGGCCATCAAG GCCCTGGAACGGGACGAACGCAGCGGCTTCGGCTGGTACCTGCTCGGCATCGCACGCGAGCGAGCCGGGGACTTCGCCTC CTCCGTCACCGCCTACGAGTCGGCCCTGAAGCTGCTGCCGGACCACGCCGAGATCGCCAACGACCTCGGCCGCCTGGCCT ACCGGATGGGCATGCGGACCCAGGCCGAGAAGCTGTTCCGGCACTTCCTCGCCCGCCATCCCGAGAACCACGAGGGCGCC AACAATCTCGCCTGCGCCCTGCGCGACCAGGAGCGGTACGAGGAGGCGGTCGAGGTCCTGAAGCCGGCGATCATCAAGTC GCCGGAAGTGGCCATGCTGTGGAACACCATGGGCACGGTGATGGCCGAACAGGGGGACTTCCCCACCTCCGAAGTCTTCT TCCGCGAGGCGCTGCGCCTGGACGGCGACCAGGCCCGGCCGCGCTACAACCTGGGCAACGCCCGCCTGATGCAGGGCGAC GCGGAGGAAGCGCTGGCATGCTGCGAGGCGGCGCTGGCCGGCCCGCTTCCCGAAGACGACCGCCAGATGATGCGCCTGGC GCGCTCGACGATCCTGATCGCGCTCGGCCGCATCGGCGAGGGCTGGGACGAGTACGAGGCGCGCCTGCACCCGCAGTTCG CCGACGTGACGCACTTCGCCGTCAAGGGCGAGCGCTGGGAGCCCGGCGCCGACGTGGCCGGCAAGTCCATGCTCGTCGTG GGCGAACAGGGCCTTGGCGACGAGATCCTCTTCGGCACGATCCTGCCCGACCTCCTTGAGCGTCTCGGCCCCGACGGGCG GCTGACCCTGGCGGTGGAGCCGCGGCTGGTCTCTCTGTTCGCCCGCAGCCTGCCCGGCGTGCGGGTGCTGGCCCACGCCA CCTACAACGTCGAGGGTCGGACGGTCCGCGCCGTGCCCGAGCTCGGCGACGCCGCGCCGGACCTCTGGGCGCCGATGGCC TCGCTGCTGCGCGAACACCGGCGCGAACTCGGCGCCTTCACGCCCCGCACCGGGTACCTGGCGGCGGATCCCGAACGGGT GGCGCACTGGAAGGGCGTGCTGGACGCCGCCGGCCTCGCCGGACCCAGGGTCGGCCTGCTCTGGAAGAGCGCCAGCCGGG CGGGCGCGCGGCATCGCCACTTCTCGCCCTTCGCCCAGTGGGCGTCGGTGCTGGCGCAGAAGGGCGTGACCTTCGTCAAC CTGCAGTACGGCGACTGCGCCGAGGAGCTGGCCTGGGCCAGGAGCGAGCTGGGCGCCGAGATCTGGAGCCCGCCCGGGAT CGACCTGAAGCAGGACCTGGACGACGTGGCCGCGCTGAGCGCCGCGATGGACCTGGTGCTGGGCTTCTCGAACGCCACCT TCAACATCGCCGCGGCCTGCGGGGTCCCGGCCTGGCTGATCACCACGCCGGGCGCCTGGCCGCGGCTGGGCACCGCCGAC CGCTATCCCTGGTACCCCCAGACCCGGGTGTTCGCGCCCGAGGCCTACGGCGCCTGGGACGGCGTCATGGGCGAGGTCGC CGCCGCCCTTGGCGCGTTCGGCGCGAGCTGA
Upstream 100 bases:
>100_bases AGCCGTTAACGGCCCCTTGCCAAGGTTCGGGCGGCTCCCGGGGTTAAGCCGCGATTAAGCATAACTGGCCAGCTTCCGAT CAGTCTTCGGGAGTTCGCCC
Downstream 100 bases:
>100_bases GGAACGCTCGGTTTTCCGAGGGGTTTTCCCCGCATGGGCGCCGCTTCCGGCGCCGAATGCGAGGAGCCCCGCCATGCCCG GAACAAGCTTCGAGTCCGAC
Product: flagellin modification protein FlmG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 596; Mature: 595
Protein sequence:
>596_residues MPAKAAPSAVSAIALQAGSAPSPARVVGGTIGEAGSKEALNQLSAAMSELKALAIQPMLQRAVDALKANDHRTGAEWAIK ALERDERSGFGWYLLGIARERAGDFASSVTAYESALKLLPDHAEIANDLGRLAYRMGMRTQAEKLFRHFLARHPENHEGA NNLACALRDQERYEEAVEVLKPAIIKSPEVAMLWNTMGTVMAEQGDFPTSEVFFREALRLDGDQARPRYNLGNARLMQGD AEEALACCEAALAGPLPEDDRQMMRLARSTILIALGRIGEGWDEYEARLHPQFADVTHFAVKGERWEPGADVAGKSMLVV GEQGLGDEILFGTILPDLLERLGPDGRLTLAVEPRLVSLFARSLPGVRVLAHATYNVEGRTVRAVPELGDAAPDLWAPMA SLLREHRRELGAFTPRTGYLAADPERVAHWKGVLDAAGLAGPRVGLLWKSASRAGARHRHFSPFAQWASVLAQKGVTFVN LQYGDCAEELAWARSELGAEIWSPPGIDLKQDLDDVAALSAAMDLVLGFSNATFNIAAACGVPAWLITTPGAWPRLGTAD RYPWYPQTRVFAPEAYGAWDGVMGEVAAALGAFGAS
Sequences:
>Translated_596_residues MPAKAAPSAVSAIALQAGSAPSPARVVGGTIGEAGSKEALNQLSAAMSELKALAIQPMLQRAVDALKANDHRTGAEWAIK ALERDERSGFGWYLLGIARERAGDFASSVTAYESALKLLPDHAEIANDLGRLAYRMGMRTQAEKLFRHFLARHPENHEGA NNLACALRDQERYEEAVEVLKPAIIKSPEVAMLWNTMGTVMAEQGDFPTSEVFFREALRLDGDQARPRYNLGNARLMQGD AEEALACCEAALAGPLPEDDRQMMRLARSTILIALGRIGEGWDEYEARLHPQFADVTHFAVKGERWEPGADVAGKSMLVV GEQGLGDEILFGTILPDLLERLGPDGRLTLAVEPRLVSLFARSLPGVRVLAHATYNVEGRTVRAVPELGDAAPDLWAPMA SLLREHRRELGAFTPRTGYLAADPERVAHWKGVLDAAGLAGPRVGLLWKSASRAGARHRHFSPFAQWASVLAQKGVTFVN LQYGDCAEELAWARSELGAEIWSPPGIDLKQDLDDVAALSAAMDLVLGFSNATFNIAAACGVPAWLITTPGAWPRLGTAD RYPWYPQTRVFAPEAYGAWDGVMGEVAAALGAFGAS >Mature_595_residues PAKAAPSAVSAIALQAGSAPSPARVVGGTIGEAGSKEALNQLSAAMSELKALAIQPMLQRAVDALKANDHRTGAEWAIKA LERDERSGFGWYLLGIARERAGDFASSVTAYESALKLLPDHAEIANDLGRLAYRMGMRTQAEKLFRHFLARHPENHEGAN NLACALRDQERYEEAVEVLKPAIIKSPEVAMLWNTMGTVMAEQGDFPTSEVFFREALRLDGDQARPRYNLGNARLMQGDA EEALACCEAALAGPLPEDDRQMMRLARSTILIALGRIGEGWDEYEARLHPQFADVTHFAVKGERWEPGADVAGKSMLVVG EQGLGDEILFGTILPDLLERLGPDGRLTLAVEPRLVSLFARSLPGVRVLAHATYNVEGRTVRAVPELGDAAPDLWAPMAS LLREHRRELGAFTPRTGYLAADPERVAHWKGVLDAAGLAGPRVGLLWKSASRAGARHRHFSPFAQWASVLAQKGVTFVNL QYGDCAEELAWARSELGAEIWSPPGIDLKQDLDDVAALSAAMDLVLGFSNATFNIAAACGVPAWLITTPGAWPRLGTADR YPWYPQTRVFAPEAYGAWDGVMGEVAAALGAFGAS
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI301336134, Length=180, Percent_Identity=27.7777777777778, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI83415184, Length=180, Percent_Identity=27.7777777777778, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI32307150, Length=195, Percent_Identity=27.1794871794872, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI32307148, Length=195, Percent_Identity=27.1794871794872, Blast_Score=67, Evalue=6e-11, Organism=Drosophila melanogaster, GI24647123, Length=156, Percent_Identity=28.2051282051282, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64327; Mature: 64196
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAKAAPSAVSAIALQAGSAPSPARVVGGTIGEAGSKEALNQLSAAMSELKALAIQPMLQ CCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RAVDALKANDHRTGAEWAIKALERDERSGFGWYLLGIARERAGDFASSVTAYESALKLLP HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCC DHAEIANDLGRLAYRMGMRTQAEKLFRHFLARHPENHEGANNLACALRDQERYEEAVEVL CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHH KPAIIKSPEVAMLWNTMGTVMAEQGDFPTSEVFFREALRLDGDQARPRYNLGNARLMQGD HHHHCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCC AEEALACCEAALAGPLPEDDRQMMRLARSTILIALGRIGEGWDEYEARLHPQFADVTHFA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHE VKGERWEPGADVAGKSMLVVGEQGLGDEILFGTILPDLLERLGPDGRLTLAVEPRLVSLF ECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHH ARSLPGVRVLAHATYNVEGRTVRAVPELGDAAPDLWAPMASLLREHRRELGAFTPRTGYL HHHCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC AADPERVAHWKGVLDAAGLAGPRVGLLWKSASRAGARHRHFSPFAQWASVLAQKGVTFVN CCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHCCCCCCCCCHHHHHHHHHHHCCCEEEE LQYGDCAEELAWARSELGAEIWSPPGIDLKQDLDDVAALSAAMDLVLGFSNATFNIAAAC EECCCHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC GVPAWLITTPGAWPRLGTADRYPWYPQTRVFAPEAYGAWDGVMGEVAAALGAFGAS CCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PAKAAPSAVSAIALQAGSAPSPARVVGGTIGEAGSKEALNQLSAAMSELKALAIQPMLQ CCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RAVDALKANDHRTGAEWAIKALERDERSGFGWYLLGIARERAGDFASSVTAYESALKLLP HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCC DHAEIANDLGRLAYRMGMRTQAEKLFRHFLARHPENHEGANNLACALRDQERYEEAVEVL CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHH KPAIIKSPEVAMLWNTMGTVMAEQGDFPTSEVFFREALRLDGDQARPRYNLGNARLMQGD HHHHCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCC AEEALACCEAALAGPLPEDDRQMMRLARSTILIALGRIGEGWDEYEARLHPQFADVTHFA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHE VKGERWEPGADVAGKSMLVVGEQGLGDEILFGTILPDLLERLGPDGRLTLAVEPRLVSLF ECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHH ARSLPGVRVLAHATYNVEGRTVRAVPELGDAAPDLWAPMASLLREHRRELGAFTPRTGYL HHHCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC AADPERVAHWKGVLDAAGLAGPRVGLLWKSASRAGARHRHFSPFAQWASVLAQKGVTFVN CCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHCCCCCCCCCHHHHHHHHHHHCCCEEEE LQYGDCAEELAWARSELGAEIWSPPGIDLKQDLDDVAALSAAMDLVLGFSNATFNIAAAC EECCCHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC GVPAWLITTPGAWPRLGTADRYPWYPQTRVFAPEAYGAWDGVMGEVAAALGAFGAS CCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748431; 11259647; 1699845 [H]