| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is ubiE [C]
Identifier: 197104816
GI number: 197104816
Start: 1531583
End: 1532428
Strand: Reverse
Name: ubiE [C]
Synonym: PHZ_c1350
Alternate gene names: 197104816
Gene position: 1532428-1531583 (Counterclockwise)
Preceding gene: 197104818
Following gene: 197104813
Centisome position: 38.35
GC content: 73.76
Gene sequence:
>846_bases ATGTCAGCAACCGCCGCCCCGAACCGGGACCAGGCCGTCCTGTGGAACGAGGCCAACGGCCGCACGTGGGTCGAGCTGCA GTCCGTGCTGGACCGGATGCTCGCGCCCTTCGCCAGCATCGTCGTGGACGAGGCCTTCCCGGGCGCTGGCGGGCGCGTCA CCGACATCGGCTGCGGCGCGGGGGCGACCACCCTGGCCATGGCCCGAAGGCTGGGTCCGGGCGGCCTGGCGCTGGGCGTC GACATCTCGGGGCCCCTGGTCGCCGCCGCAGCCGAACGCGCGAGGGCCGAGCGCCTGGAGAACGCCGCCTTCGTGCAGGC CGACGCCCAGACCTACGCCTTCGACGAGGCGGGGTTCGACGCAGTGATGTCGCGGTTCGGGGTGATGTTCTTCGAGGACC CGGAGGCCGCCTTCGCCAACATCCGGCGCGGCGTGCGGTCCGGCGGCAAGCTCGCCTTCGTGGCCTGGCGCAGTCCCGCC GAGAACCCGTTCATGACCACGGCCATGCGCGCTGCTGCGCCGTTCCTGCCGCCCCTGCCGACGCCCGAGCCGGGCGCGCC GGGCCAGTTCGGGTTCGCGGACGGCGAGCGCGTCCGGCGCATCCTCGAGGCCAGCGGGTGGACCGGGGTGGAGGTGCGGC CCATCGACGTGCCCGCCTCGGTCGCCGAGGCGGACCTGAAGACCTACGTCGCCCGCATGGGCCCGGTAGGCGCGGCGATG CGAGAGCTGCCCGAGGCGGACCGTGCGCGGATCGTCGAAGCGTTGCAGACGGCCTATGCGCCCTTCATCGAGGATGGAGA GGCCCGCTTCACGGCCGCCTGCTGGCTGGTGACAGCGCGGGCCTAG
Upstream 100 bases:
>100_bases CTGCGATGTCCAGTTCGGCCATGGGGGTTGACCTCAAGTCAGCTTGAACTTGCACACTGCGCCGCACGAACCCTCGAGGG CAAGCCGAAGGAGCCTCCCA
Downstream 100 bases:
>100_bases AGCGCCGGCTGCGTCGCGAGCGCCCTCGCCGCCTCGGCCGCGATCTCGAACGAGCGGACGCGGGCGGCGTGATCGTAGAT CTGGGCCGTGACGATGATCT
Product: ubiquinone/menaquinone biosynthesis methyltransferase ubiE
Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]
Alternate protein names: Methyltransferase; S-Adenosyl-L-Methionine-Dependent Methyltransferase; Methyltransferase UbiE/COQ5 Family; SAM-Dependent Methyltransferase; Methlytransferase UbiE/COQ5 Family Protein; Methyltransferase Protein; UbiE/COQ5 Family Methlytransferase; UbiE/COQ5 Methyltransferase; UbiE/COQ5 Family Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methyltransferase UbiE; Aklanonic Acid Methyl Transferase; Methyltransferase Domain Family
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSATAAPNRDQAVLWNEANGRTWVELQSVLDRMLAPFASIVVDEAFPGAGGRVTDIGCGAGATTLAMARRLGPGGLALGV DISGPLVAAAAERARAERLENAAFVQADAQTYAFDEAGFDAVMSRFGVMFFEDPEAAFANIRRGVRSGGKLAFVAWRSPA ENPFMTTAMRAAAPFLPPLPTPEPGAPGQFGFADGERVRRILEASGWTGVEVRPIDVPASVAEADLKTYVARMGPVGAAM RELPEADRARIVEALQTAYAPFIEDGEARFTAACWLVTARA
Sequences:
>Translated_281_residues MSATAAPNRDQAVLWNEANGRTWVELQSVLDRMLAPFASIVVDEAFPGAGGRVTDIGCGAGATTLAMARRLGPGGLALGV DISGPLVAAAAERARAERLENAAFVQADAQTYAFDEAGFDAVMSRFGVMFFEDPEAAFANIRRGVRSGGKLAFVAWRSPA ENPFMTTAMRAAAPFLPPLPTPEPGAPGQFGFADGERVRRILEASGWTGVEVRPIDVPASVAEADLKTYVARMGPVGAAM RELPEADRARIVEALQTAYAPFIEDGEARFTAACWLVTARA >Mature_280_residues SATAAPNRDQAVLWNEANGRTWVELQSVLDRMLAPFASIVVDEAFPGAGGRVTDIGCGAGATTLAMARRLGPGGLALGVD ISGPLVAAAAERARAERLENAAFVQADAQTYAFDEAGFDAVMSRFGVMFFEDPEAAFANIRRGVRSGGKLAFVAWRSPAE NPFMTTAMRAAAPFLPPLPTPEPGAPGQFGFADGERVRRILEASGWTGVEVRPIDVPASVAEADLKTYVARMGPVGAAMR ELPEADRARIVEALQTAYAPFIEDGEARFTAACWLVTARA
Specific function: Methyltransferase Required For The Conversion Of Dimethylmenaquinone (Dmkh2) To Menaquinone (Mkh2) And The Conversion Of 2-Polyprenyl-6-Methoxy-1,4-Benzoquinol (Ddmqh2) To 2-Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol (Dmqh2). [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.- [C]
Molecular weight: Translated: 29717; Mature: 29586
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATAAPNRDQAVLWNEANGRTWVELQSVLDRMLAPFASIVVDEAFPGAGGRVTDIGCGA CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC GATTLAMARRLGPGGLALGVDISGPLVAAAAERARAERLENAAFVQADAQTYAFDEAGFD CHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCHHEEEECCHHEEECCCCHH AVMSRFGVMFFEDPEAAFANIRRGVRSGGKLAFVAWRSPAENPFMTTAMRAAAPFLPPLP HHHHHHCEEEEECHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC TPEPGAPGQFGFADGERVRRILEASGWTGVEVRPIDVPASVAEADLKTYVARMGPVGAAM CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHH RELPEADRARIVEALQTAYAPFIEDGEARFTAACWLVTARA HHCCCHHHHHHHHHHHHHHCCHHCCCCCCEEEEEEEEEECC >Mature Secondary Structure SATAAPNRDQAVLWNEANGRTWVELQSVLDRMLAPFASIVVDEAFPGAGGRVTDIGCGA CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC GATTLAMARRLGPGGLALGVDISGPLVAAAAERARAERLENAAFVQADAQTYAFDEAGFD CHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCHHEEEECCHHEEECCCCHH AVMSRFGVMFFEDPEAAFANIRRGVRSGGKLAFVAWRSPAENPFMTTAMRAAAPFLPPLP HHHHHHCEEEEECHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC TPEPGAPGQFGFADGERVRRILEASGWTGVEVRPIDVPASVAEADLKTYVARMGPVGAAM CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHH RELPEADRARIVEALQTAYAPFIEDGEARFTAACWLVTARA HHCCCHHHHHHHHHHHHHHCCHHCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]
Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA